View Redoxidase 10090

Entry information : NfulGPx02 (var.elongata)

Entry ID	10090
Creation	2012-01-05 (Passaia GisÃ¨le)
Last sequence changes	2012-01-05 (Passaia GisÃ¨le)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-04-23 (Catherine Mathe (Scipio))

Peroxidase information: NfulGPx02 (var.elongata)

Name (synonym)

NfulGPx02 (var.elongata)

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycodaceae Nadsonia

Organism

Nadsonia fulvescens [TaxId: 45786 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	NfulGPx02 start..stop	S start..stop
SmiGPx02	248	3.67e-86	5..163	2..160
SpaGPx02	248	4.18e-86	5..163	2..160
SceGPx03	247	1.53e-85	5..163	2..160
SpastGPx01	247	1.58e-85	5..163	2..160

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	727812..728303	490
complement(join(727812..728303))

Literature and cross-references NfulGPx02 (var.elongata)

DNA ref.	JGI genome: scaffold_4 (728303..727812)

Protein sequence: NfulGPx02 (var.elongata)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	163
PWM (Da):	18300.26
PI (pH):	7.18

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MSSATSFYEL APSAKNNQPF PFSQLEGKVV LIVNVASKCG FTPQYKGLEA LYQKYHDEGL EIVGFPCNQF GSQEPGSEEE ISSFCQLNYG VTFPIMKKVK VNGKDSDPVY EFLKSKKSGL
LGLSRVKWNF EKFLIDKNGN VVERWASTTS PEKLSDTIEK YLK*

Retrieve as FASTA

Remarks

Complete sequence from genomic (scaffold_4:727812-728303 (-), NO intron) No EST. Strain "DSM 6958"

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGTCTTCTG CTACTTCGTT TTATGAACTC GCCCCATCTG CCAAAAATAA TCAACCCTTC CCTTTTAGTC AATTGGAAGG CAAGGTTGTT CTTATAGTCA ATGTTGCCTC CAAGTGTGGC TTTACTCCAC AATACAAGGG TCTTGAAGCT CTCTATCAAA AATACCATGA TGAAGGTCTT GAAATTGTCG GTTTTCCTTG TAACCAATTT GGCTCGCAAG AACCTGGTTC CGAAGAAGAG ATTTCTTCTT TCTGTCAATT GAATTACGGC GTCACTTTTC CTATCATGAA AAAGGTCAAA GTTAACGGCA AAGACAGTGA TCCGGTTTAC GAATTTCTAA AAAGTAAGAA GTCTGGCCTT CTTGGCCTTT CTCGTGTCAA ATGGAATTTT GAAAAGTTCT TGATTGATAA GAACGGTAAT GTTGTAGAAA GATGGGCCTC TACAACCAGC CCTGAAAAGC TTTCTGATAC TATTGAAAAG
TACTTGAAAT AA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA