Phylogenetic Study
Launch Pipeline
Start by selecting the sequences of interest from a Multicriteria search.
The selected sequences will be aligned with MAFFT in order to generate the phylogenetic tree with PhyML
.
In parallel, the detection of introns will be done thanks to CIWOG followed by
GECA that will generate the gene structures.
Finally, these results will be combined together and visualized with Archaeopteryx
.
Limitations
This pipeline is limitted to a 100 sequences.
This Pipeline runs PhyML and
GECA in order to generate a phylogenetic
tree with gene structure information that will be visualized by Archaeopteryx
.
Launch Pipeline
Start by selecting the sequences of interest from a Multicriteria search.
The selected sequences will be aligned with MAFFT in order to generate the phylogenetic tree with PhyML

Finally, these results will be combined together and visualized with Archaeopteryx

Limitations
This pipeline is limitted to a 100 sequences.
Input Sequences are extracted from the Redoxibase from a Mutricriteria search |

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Visualization Archaeopteryx ![]() Mode: Applet. Output: XML. |