View Redoxidase 10094

Entry information : PmemGPx01

Entry ID	10094
Creation	2012-01-05 (Passaia GisÃ¨le)
Last sequence changes	2012-01-05 (Passaia GisÃ¨le)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-04-27 (Catherine Mathe (Scipio))

Peroxidase information: PmemGPx01

Name

PmemGPx01

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycetaceae Pichia

Organism

Pichia membranifaciens (Candida valida) [TaxId: 4926 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PmemGPx01 start..stop	S start..stop
HburGPx01	237	1.87e-81	24..183	1..160
PangGPx01	237	2.78e-81	24..184	1..161
SkluGPx01	235	1.72e-80	22..182	10..170
SpastGPx02	235	1.81e-80	24..184	1..161

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1514953..1515504	550
join(1514953..1515504)

Literature and cross-references PmemGPx01

DNA ref.	JGI genome: scaffold_2 (1514953..1515504)

Protein sequence: PmemGPx01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	184 (343)
PWM (Da):	20346.38 (36661.8)
PI (pH):	8.75 (5.03)	Peptide Signal:	cut: 27 range:27-369

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MQRSVATATR AFSATAAKPS TSIMSKFYSF TATANNGTPF PLADLKGKVV LVVNTASKCG FTKQYADLEE LYKKYHEQGL EVVGFPCNQF AGQEPGSSEE IAQFCKLNYG VSFPIMQKID
VNGDKEDPLY AWLKAEKPGL LGFKGIKWNF EKFLVDKEGN VYQRYSSIKN PASLSGDVEL LLKK*

Retrieve as FASTA

Remarks

Complete sequence from genomic (scaffold_2:1515022-1515507 (+), No intron) No EST.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGCAGAGAA GCGTAGCCAC AGCCACACGA GCATTCTCAG CAACAGCAGC AAAGCCAAGC ACCAGCATCA TGTCCAAATT CTACAGCTTC ACGGCCACCG CCAACAACGG CACGCCCTTC CCGCTCGCGG ACCTCAAGGG CAAGGTTGTG CTCGTGGTGA ACACGGCGTC CAAATGCGGC TTCACCAAGC AGTACGCAGA CTTGGAGGAG CTCTACAAGA AGTACCACGA GCAGGGGCTC GAGGTGGTGG GGTTCCCCTG CAACCAGTTT GCCGGGCAGG AGCCCGGCTC GTCGGAGGAG ATTGCGCAGT TCTGCAAGCT CAACTACGGC GTCAGCTTCC CCATCATGCA GAAGATCGAC GTGAACGGCG ACAAGGAGGA CCCGCTGTAC GCGTGGTTGA AGGCCGAGAA GCCCGGGCTC CTTGGCTTCA AGGGCATCAA GTGGAACTTC GAGAAGTTTC TTGTGGACAA GGAGGGCAAT
GTGTACCAGC GCTACTCGAG CATTAAGAAC CCGGCCTCGC TTTCGGGCGA CGTGGAGCTC TTGCTCAAGA AG

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA