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Entry information : EgrPrxII03 (Eucgr.C03812 / Egrandis_v1_0.029562m)
Entry ID 10153
Creation 2012-01-24 (Christophe Dunand)
Last sequence changes 2012-01-24 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2013-10-30 (Qiang Li)
Peroxidase information: EgrPrxII03 (Eucgr.C03812 / Egrandis_v1_0.029562m)
Name (synonym) EgrPrxII03 (Eucgr.C03812 / Egrandis_v1_0.029562m)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrxII03
start..stop		 S start..stop
EguPrxII03 330 2.78e-118 1..162 1..162
EglPrxII03 330 2.88e-118 1..162 1..162
EcamPrxII03 330 2.88e-118 1..162 1..162
CsPrxII02 300 9.19e-107 1..162 1..162
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 71531992..71532146 153 N° 2 71532573..71532652 78 N° 3 71533874..71534127 252  
join(71531992..71532146,71532573..71532652,71533874..71534127)


exon

Literature and cross-references EgrPrxII03 (Eucgr.C03812 / Egrandis_v1_0.029562m)
DNA ref. Phytozome 12:   scaffold_3 (71531992..71534127)
Protein sequence: EgrPrxII03 (Eucgr.C03812 / Egrandis_v1_0.029562m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   162 (747)
PWM (Da):   %s   17219.98 (81639.8)  
PI (pH):   %s   5.64 (6.52) Peptide Signal:   %s   cut: 21 range:21-767
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAPIAVGDAIPDGTLAYFDEQDQLQQVSVHSLAAGKKAVLFAVPG
AFTPTCSLKHVPGFIENAELLKSKGVDEILCLVNDPFVMKAWAKTYPENKHVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVEDLKVKAANIESGGEFTVSGADEILKAL

Retrieve as FASTA  
Remarks Complete sequence from genomic (2 introns). Correct prediction from phytozome.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCCCGATCGCCGTCGGCGACGCCATCCCCGACGGCACCCTCGCCTACTTCGACGAGCAGGACCAGCTCCAGCAGGTCTCCGTGCACTCCCTCGCCGCCGGCAAGAAGGCCGTCCTC
TTCGCCGTCCCCGGCGCCTTCACCCCGACTTGCAGAGGTGAGGGCCGCCGACTGCTTTTTTCTTTCTCGCCGTTCCCTCGTCCTGCGTCGCCGCCGGTTTGCGGTAGCGCGCGGGAGGGG
AGGGAGAGCGGGGGTGAATCGCAGCGTGAATCGTTGGGAATTCTTTGCCTAAATTGACGGTTTCATTTCTGTTTTCTAGAATGTTCTGTATTTCTTGAGTAGTGTGGAAGTGGTGTTCGA
TGCGATTAGTTTCGTACGGTCGTGGCGAGGCTGTTAGATGTTTGTTTGGACCGAAACGAGTCATGATTCGTGAGCACCTGAATTCGTTTGGAAAATAGTGCATTATGCTACGGCCTGCTC
GATTAAAGATGAGGTTTTTGGAGTGAATAACGCTGGAATTGTCACTAGCGATTGTAGCTTCGATCTTGCGGTATTACCGTTGTTTGTATCGTTCGATTTGCAGTCTGAAGCACGTGCCGG
GCTTCATTGAGAACGCCGAGCTGCTGAAATCCAAGGGTGTGGATGAGATTCTGTGTCTCAGCGCGGTATATTCTTTATCTTTTTCCGTCTCTGTGCGATTTCTTTCGTTCTTTTTTTTTT
CAGAGTTTGTGGACGATCGTTCCTCTTTATTTGTCGTCTAATATCGGCGTTTCTTGCTATATCCGCCGATGCTTTGTTTTAAAGGTTACACCTAATGTTTCTGTCCTTACTATTGAGTAA
TGTAGTGTAGCGCATCTGCTCGTTAGTGACGAGGTAAAGAAGCTATCTTCAGTGAGTCGCCAAATATAATGGTTTCAGCAAGCATCAAGAATCTTAAACTTATAATAACGGGGATTGGGG
ACTGTACTGGTTTTCTGGAGATTACAAGGAAATGCAAAAGGGACTCCAGTTTTGACTTTGAGCAGTTCTTTTGAGGCATTAGTCAGTAGTTGACCATTTCTTGTAGCGTTGCTTTCGTCA
CCCAATTGCTTGCCCAATTATTAGTTGGGAGTATTCACGAGTTGACTTTAAGCAGTTGTTACGAGGCATCAGTCAGGAGATAAATATATCATGTGTGATATTTTTCCTTGTTGCCGCTCT
TCAAAATCCACTTGCCGCTCTATCCATTAAATAGTTACAAACTGTTCTGGATAGCTTGCCTTCAGGCTTGGTAGTGTAGTTGGTGTAAGTCTAATTCCATCTAAAATTGTGCCTTGTGGT
CAAGAGAGATCCGATCATCTTGGCCTGGAATCTTCTTGGGAATCTTTAAATGGATGTGATTGGACACTCTCTCCCTCTCTGGGCGGGCCATGTGGTTTTACTTTTCAATCAAACTATTAT
GCTTATTAACCAAATGCTGGATTGCTAATGACACAGTGAGTTCAAGATCCTGCTTGGGAAACAACTACAGAAAGCTAGTCCAAAAAGAACTCGGTTTCTGGGTCCTAGGACACTTGAAAG
AGCTTGAATTGAAACTTTGCACCGTCATTAGTGAAAATATGGCTTTGCTTAACGCTCTCGTATCTTTACTTCTCTTGACTTTACTGCTGACCTTCCACCCCATACTGAGGATATGTGGCT
GTGTGAATTCCATATTTGATTCCAGAGTTGAGCTCCTAGATGTTGTATGGAGTCTATTAAAGAGTTTGCGCCATCCTTTAGTTAATAAAACGTGCTAGCTTTAGAACAGATGGCAGTTTG
TCTGTCTTAGGTAATCCAGTCCTACCATGTGTTTTTTGTTTTTTTCCCCTGAATATCGTGATGCTCATTTTGGTCCTATTTTTCAGTGAATGACCCATTTGTGATGAAGGCGTGGGCGAA
GACTTACCCCGAGAACAAGCATGTAAAGTTCTTGGCAGATGGTTCGGCGAAATACACCCATGCTCTTGGCCTCGAGCTTGACCTAAGTGAGAAGGGGCTTGGGACTCGCTCCAGGAGATT
TGCTCTCTTGGTCGAGGATCTCAAGGTGAAGGCAGCCAACATCGAATCCGGGGGAGAGTTCACCGTCTCCGGTGCTGATGAAATCCTTAAAGCTCTCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCCCGATCGCCGTCGGCGACGCCATCCCCGACGGCACCCTCGCCTACTTCGACGAGCAGGACCAGCTCCAGCAGGTCTCCGTGCACTCCCTCGCCGCCGGCAAGAAGGCCGTCCTC
TTCGCCGTCCCCGGCGCCTTCACCCCGACTTGCAGTCTGAAGCACGTGCCGGGCTTCATTGAGAACGCCGAGCTGCTGAAATCCAAGGGTGTGGATGAGATTCTGTGTCTCAGCGTGAAT
GACCCATTTGTGATGAAGGCGTGGGCGAAGACTTACCCCGAGAACAAGCATGTAAAGTTCTTGGCAGATGGTTCGGCGAAATACACCCATGCTCTTGGCCTCGAGCTTGACCTAAGTGAG
AAGGGGCTTGGGACTCGCTCCAGGAGATTTGCTCTCTTGGTCGAGGATCTCAAGGTGAAGGCAGCCAACATCGAATCCGGGGGAGAGTTCACCGTCTCCGGTGCTGATGAAATCCTTAAA
GCTCTCTGA

Retrieve as FASTA