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Entry information : EgrPrxII02 (Eucgr.B01112 / Egrandis_v1_0.027538m)
Entry ID 10154
Creation 2012-01-24 (Christophe Dunand)
Last sequence changes 2012-01-24 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2013-10-30 (Qiang Li)
Peroxidase information: EgrPrxII02 (Eucgr.B01112 / Egrandis_v1_0.027538m)
Name (synonym) EgrPrxII02 (Eucgr.B01112 / Egrandis_v1_0.027538m)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrxII02
start..stop		 S start..stop
EcamPrxII02 394 1.45e-142 1..196 1..196
EguPrxII02 390 2.78e-141 1..196 1..196
EglPrxII02 338 1.45e-120 1..196 1..195
CclPrxII05 328 2.53e-116 1..197 24..225
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 17478747..17478947 199 N° 2 17478611..17478640 28 N° 3 17477071..17477229 157 N° 4 17476291..17476385 93
N° 5 17476011..17476116 104  
complement(join(17476011..17476116,17476291..17476385,17477071..17477229,1747861 1..17478640,17478747..17478947))


exon

Literature and cross-references EgrPrxII02 (Eucgr.B01112 / Egrandis_v1_0.027538m)
DNA ref. Phytozome 12:   scaffold_2 (17478947..17476011)
Protein sequence: EgrPrxII02 (Eucgr.B01112 / Egrandis_v1_0.027538m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   196 (302)
PWM (Da):   %s   20810.72 (32920.8)  
PI (pH):   %s   7.41 (7.97) Peptide Signal:   %s   cut: 27 range:27-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASLLAKRSSSSVLGGLWTGAARTYASVAVGGDIVSAAPGVSLQKARSWDEGVSSKFATTPVKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNNIDKFKAKGIDSVICVAVNDPYTMNG
WAENLKAKDAIEFYGDFDASFHKSLDLTKDLSAALLGLRSERWSAYVEDGKVKALNVEEAPSDLKVSGAEVILGQI*

Retrieve as FASTA  
Remarks Complete sequence from genomic (4 introns). Correct prediction from phytozome.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTCGCTGCTCGCGAAGCGCTCGAGCTCCTCCGTCCTCGGCGGCCTATGGACGGGCGCGGCCAGGACCTACGCCTCGGTCGCCGTCGGCGGCGACATCGTCTCCGCGGCGCCGGGC
GTCTCCCTCCAGAAGGCTCGGAGCTGGGACGAGGGCGTGTCCTCCAAGTTCGCCACCACCCCTGTCAAGGATATCTTCGAGGTTGGTTTTCGATTTCTTGCTGATTGCTTCATTCGCAGT
GGAAGTTCAGCTTCTGAATTTTTACTAATTTGCTTTGCCTGGGCTTCATTCGGACATGGGATTTCAGGGGGCAAGAAGGTGGTGATTTTCGGACTCCCGGTGAGTGAACTCTCGGCTCTT
TCATGTCTGTAGTTTCGTGGGAAATAATCGAGCCCTTTTTGTCTTCTGGGCAGTTGATTCATGGGTGTCGATTGCAGCAAGCAATGTCTTCCTTATTTAGTGCTAACTTAGCGGCAAAGA
TTGCTCTTTTTTTTCCGACATCTGAAATGGTTGAATAAGACAGAGGAGATGCGTCTGAATTGTCTAATGGGAATCGTTTCAATTATTCGTTTAATGGGTTGCTTTCATGTTCTCGCCTTA
TTGGTTGGTGTCATCGTGTGGAGGCTTGAATAGATCGATAGATTATGATATGCAGCTAGACTTTGCCAATTGCCATGAGAGAGTCGTGTTATGCTCTTTGATAGCAAAAATAGAAATCTT
TCCTTTGAACTCTGCAAAGTTCTTATTTTTGAAAAGCTGGAAGGAGTTTATAGAAATCTGGAAAAGAGCCTAATAAATGAGATCATATTGAAATTTGATGTTTGACGCTTCTATGAAGTA
TTGTCCCATTCTTCGAACATTTATTGTACTTGTGAAAAGGATAGGTGCTGGGTTCCTAGCGGAAACTTCAAAGGCACTGCAGTCCATAATATGAGATTGCATGCTAGTCCACCATGTTTA
GGTTCTGTGGTTCACTTACTTCATGATCCTAGCTGCATCATTGACGAAAATTTGGACATCGAGGTGACTATTTAACCAACTTGTTATAACTTCCAACCAAAATGAAAGTAAAAAAGAAAA
AACGATTTGGATTTAGACAATTTTAAATAAGTTTCACCAGACATTAATGTTATAATTCACGTACTTTTTTATATCGAGGTGTTCAATACTAGATAAAAGTCAATCTAAAACACTAAAAGC
AAAAAATAGAAATAAGAAGTTGAAAAACATGTAACCTTGAACAAAACTTGCACAACAAAGTTAGTATGTTTAGAGAAAACTTTGTTGTTGTCTGTTAATAATGTAGTTTGATGCGATGCC
ATATTTAATCTTCCATCTTACCTCTTAAAGCATTTCTAGTTTTATATACACCATATTTCTATTTTTTTAATTTGTACCCAAGTCCTTGATGCTGAATTCATCTTGCGTCTAATGCCCAAG
AGAGACTGCATATGTCAGTCTATGCAGTCTCTTCTCAATACCATTGCATGTGTTTTCTCGGAATGCATTATCCGGTTATAGTTCATGATGTGCATTATCTTGCCATTTTAACCTCGGAAA
CTGAGACATGTTAACTTTAAGAAGATTTGACATATTGAAGCTGTAGCTACTGCAGGTCAAATGATAAAGGATAGCAAGTTGATATTTAACAATTCTATACTGGTTTTCCTTCTTTCTCTT
GGTGCTTTCTATTCAAGTTTTCATATTTGATGTCTCCCAGGGGGTGCATACACTGGAGTTTGTTCACAGCAGCATGTGCCTAGCTACAAGAATAATATCGATAAGTTTAAGGCTAAAGGC
ATAGACTCTGTGATTTGTGTGGCTGTCAATGACCCCTACACCATGAATGGCTGGGCTGAAAATCTCAAAGCAAAAGATGCTGTAAGTTACTAATTTTGAAACCCAATTCTTTGCTTCTAG
AGATGAACTACTGTGTCTGGCTTACGTATTTTCTTCATCCAAATATCCTTTTGGCAGTCTTTTCTCTCTTAAATGAATTATGAATGGTTTTGGAATGTTTGAGTTGGGTGTTGAGTTCCT
TGACTCATCTTTTTGATAATTTCTTGAGGAAAAATTTGTTGATTGTTGTGAGGATTTCTGGTATTGCCTCACATTTCTTCCTGCAACTTGTAGAACATCAATACGAGGTTATTTTCTTTT
GTTTTTATTTTCTTCAAGAGGATGACTCTCCTTTATGTCACAACGTTCCATTTGCAAAACTGTAAATGCATGTTGTTAGGACATGCAGTGATCACAATCAGAGGTGAAATGGCAGTAGAG
CAGCTAGAATACTTACCTCAGTTTTATTATTAGTGCCATCTTTAAAGAAAGTGTACTACTACAGAAGTTTTCTTGGGCAAAACAATCCATTTCCAGAGATGCAAATGAGGCTTCTTTTTT
TAGAGTATGTGTGTGACACTGTGAAGGAATGTGGTTCATGTATGCACAACAAGCAAAGCTTGATTTTTACCTTGTTTGTGAACTTCTGTCATCTCTGCCTCCCCACATTTTAAAGTGAAA
GAAGGCTCTGACATGAGCTTGTGCTTGTTTTTCTTAATCATAAAAGATATCGAATTCTATGGGGATTTTGATGCTAGCTTCCATAAGAGCTTGGACTTGACTAAAGATCTCTCAGCAGCT
TTGCTTGGACTTCGCTCTGAAAGGTATGCCCTAGGCCCTAATAAGTTAATATTGGACATCAAACACCTCCTTGAATCTCCTTCCGTCATTTTTACCTTTGGACCATCACTTTATGGATGA
AATGCCTAATTAAATGATCAGTTTGTCCTTGGATCTACTCTTTTTTTTTGGGTAATCAAATGGTTGCTCTGGTGTAGATATGGTCAGCTTATGTGGAGGACGGGAAAGTGAAGGCTCTCA
ATGTGGAAGAAGCTCCATCCGACCTCAAGGTTTCTGGTGCCGAGGTTATTCTGGGACAGATATGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTCGCTGCTCGCGAAGCGCTCGAGCTCCTCCGTCCTCGGCGGCCTATGGACGGGCGCGGCCAGGACCTACGCCTCGGTCGCCGTCGGCGGCGACATCGTCTCCGCGGCGCCGGGC
GTCTCCCTCCAGAAGGCTCGGAGCTGGGACGAGGGCGTGTCCTCCAAGTTCGCCACCACCCCTGTCAAGGATATCTTCGAGGGCAAGAAGGTGGTGATTTTCGGACTCCCGGGTGCATAC
ACTGGAGTTTGTTCACAGCAGCATGTGCCTAGCTACAAGAATAATATCGATAAGTTTAAGGCTAAAGGCATAGACTCTGTGATTTGTGTGGCTGTCAATGACCCCTACACCATGAATGGC
TGGGCTGAAAATCTCAAAGCAAAAGATGCTATCGAATTCTATGGGGATTTTGATGCTAGCTTCCATAAGAGCTTGGACTTGACTAAAGATCTCTCAGCAGCTTTGCTTGGACTTCGCTCT
GAAAGATGGTCAGCTTATGTGGAGGACGGGAAAGTGAAGGCTCTCAATGTGGAAGAAGCTCCATCCGACCTCAAGGTTTCTGGTGCCGAGGTTATTCTGGGACAGATATGA

Retrieve as FASTA