View Redoxidase 10177

Entry information : EgrRboh02 ( Eucgr.E00785 / Egrandis_v1_0.001715m)

Entry ID	10177
Creation	2012-01-25 (Qiang Li)
Last sequence changes	2012-01-25 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2016-02-19 (Christophe Dunand)

Peroxidase information: EgrRboh02 ( Eucgr.E00785 / Egrandis_v1_0.001715m)

Name (synonym)

EgrRboh02 ( Eucgr.E00785 / Egrandis_v1_0.001715m)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus grandis [TaxId: 71139 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EgrRboh02 start..stop	S start..stop
EguRboh02	1984	0	1..965	1..965
EcamRboh02	1977	0	1..965	1..964
CclRboh01	1650	0	1..965	1..946
CsRboh01	1648	0	1..965	1..946

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10177' 'join(8180372..8181080,8181194..8181353,8181740..8181788,8182540..8182653,8184220..8184642,8186183..8186569,8186747..8186842,8186955..8187070,8187212..8187379,8187496..8187655,8187799..8187996,8188097..8188225,8188340..8188418,8188513..8188622)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	8180372..8181080	707	N° 2	8181194..8181353	158	N° 3	8181740..8181788	47	N° 4	8182540..8182653	112
N° 5	8184220..8184642	421	N° 6	8186183..8186569	385	N° 7	8186747..8186842	94	N° 8	8186955..8187070	114
N° 9	8187212..8187379	166	N° 10	8187496..8187655	158	N° 11	8187799..8187996	196	N° 12	8188097..8188225	127
N° 13	8188340..8188418	77	N° 14	8188513..8188622	108
join(8180372..8181080,8181194..8181353,8181740..8181788,8182540..8182653,8184220 ..8184642,8186183..8186569,8186747..8186842,8186955..8187070,8187212..8187379,81 87496..8187655,8187799..8187996,8188097..8188225,8188340..8188418,8188513..81886 22)

Literature and cross-references EgrRboh02 ( Eucgr.E00785 / Egrandis_v1_0.001715m)

DNA ref.	Phytozome 12: scaffold_5 (8180372..8188622)

Protein sequence: EgrRboh02 ( Eucgr.E00785 / Egrandis_v1_0.001715m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	965 (319)
PWM (Da):	108733.03 (34458.5)	Transmb domain:	o403-422i542-564o584-606i763-780o
PI (pH):	9.45 (6.17)	Peptide Signal:	cut: 23 range:23-341

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MKGLAKHGRRWASDTVPGKSPASDSTSPAGTEASYGEELVEVTLD
LQEDDTIVLRSVEPATAASALTIKIDDDDGGGGGCGGGGSGAETPRGASSSAPSRSPAMRRSSSSRLRQFSQELK
AEAVAKARQFSQELKAELRRFSWSHGHASRVLSASTSSAGQ
NAGGFDVALAARALRKQRAQLDRNRSGAQKALRGLRFISNSKTNCSIDAWNEIQASFDKLAKDGCLYRQDFAQCIGMKDSKEFALELFDALGRRRRMKVDRISKDELHEFWCQITDQSFDSRLQIFFDMVDKNEDGRITGEEVKIIMLSASANRLSRLKEQAEEYAALIMEELDPEQLGYIELWQLETLLLQKDTYLNY
SQALSYTSQALSQNLQGLRRRSRIRRLSTKCLYYLEENWRRIWVVTLWVMIMIGLFTWKFVQYKQKAAFQVMGYCLLTAKGAAETLKFNMALILLPVCRNTITWLRNTRVGLFIPFDDNI
NFHKTIAAAIVVGVILHVGDHLACDFVRLEHASKDVYHRYLEDDFGNPKPTYFDLVKGIEGVTGILMVILMLIAFTLATRWFRRSLVKLPKPFDRLTGFNAFWYSHHLFVLVYILLIIHG
VFLYLVHHWYRKTTWMYLAVPVLLYAGERTLRFFRSGMYTVRLLKVAIYPGNVLTLKMSKPPQFKYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDFLSVHIRQLGDWTQELKRVFAEAC
EPPVAGKSGLLRADETTKKSLPKLCIDGPYGAPAQDYKKYDVLLLVGLGIGATPFISILKDLINTIVKSEEQDSVTDVSRNSDLSIGSVESPGPNRVSPRRRKTLKTTNAYFYWVTREQG
SFDWFKGVMNEVAEIDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGIDIVSGTTVRTHFARPNWKKAFNKLCSKHSGARIGVFYCGAPVLAKELSKLCYEFNQKGPTKFDFHK
EHF

Retrieve as FASTA

Remarks

Complete sequence from genomic (scaffold_5, 13 introns). Correct prediction from phytozome.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAAGGGCCTCGCCAAGCACGGGCGCCGGTGGGCGTCGGACACCGTCCCCGGCAAGTCACCGGCCAGCGACAGCACTTCGCCGGCGGGTACGGAGGCCAGCTACGGCGAGGAGCTCGTG
GAGGTGACCCTCGACCTGCAGGAGGACGACACGATCGTCCTCCGCAGCGTCGAGCCCGCCACGGCAGCCTCCGCGTTGACTATCAAGATCGACGACGACGACGGCGGCGGCGGCGGCTGC
GGCGGCGGCGGCAGCGGGGCCGAGACGCCCCGCGGGGCTTCCTCCTCGGCCCCGTCCCGGTCGCCGGCGATGCGCCGCAGCTCGTCGAGCCGGCTCCGGCAGTTCTCGCAGGAGCTGAAG
GCGGAGGCGGTGGCCAAGGCGCGGCAGTTCTCGCAGGAGCTCAAGGCGGAGCTGCGGCGGTTCTCGTGGAGCCACGGCCACGCGTCCCGCGTGCTCTCAGCGTCCACGTCGTCCGCCGGC
CAGAATGCCGGCGGCTTCGACGTGGCCCTGGCGGCCCGGGCCCTGCGGAAGCAGCGCGCGCAGCTCGACCGGAACCGCTCGGGCGCCCAAAAGGCCTTGCGCGGGCTGCGGTTCATCAGC
AACAGCAAGACCAACTGCAGCATCGATGCATGGAACGAAATTCAGGCTAGCTTCGATAAGCTTGCCAAAGATGGTTGTCTCTATCGTCAAGATTTCGCACAATGCATAGAGGTTTTCGCC
ATCTCTCTCTCTCTCTCTCTCTCTCTAAATTCACGTCCCTTTATGGTGGATTTCTCTCCTTAGCGTTCATACTGACGACGTCCTTGTCTTTTTTCCCGGTGAAGGAATGAAAGATTCGAA
GGAGTTTGCTTTGGAACTGTTCGATGCATTGGGGAGGAGGAGGAGAATGAAGGTCGACAGGATCAGCAAAGACGAGCTCCACGAGTTCTGGTGTCAGATCACTGATCAGAGCTTCGATTC
ACGTCTCCAGATCTTCTTCGACATATGTACGCATGATGATCGCGATGATGATGATGAATTAAAAAAAAAGAAAAAGAACCAACTTGATAACTTTTTTCTTTTCTTCTTTTTTTTTTTACA
CTGTTGTGTTTTGATAAAGATTGCACTTCTTTAACAAACTAAGGAACAGACCGATTCATCTCCATTAGGTATTTTTAATTATTTTCATATTAACGCGAGATGATTGTGTATTGTCAGTGG
GTAAAGAGCCAGAAGCGAGAAAAGCAAGAACAGGGACCGCTGAACAATATCTTAATTATGGACCTAATTATTGATCGAGTCATATGTTTTTTATTTGCACCTAGTACGTTTTTCATTAAA
AACAATCTGTTTGGTCGATAATTAATCTTTTCTCTTGTTGAATACATGACAGGGTAGACAAGAACGAGGACGGAAGAATCACCGGAGAAGAAGTAAAAGAGAGGTGAGAGTTCTGTTTGA
ACCGATTGTCATTAGCTGTCATTTTCGAGAAAATTAAAGCTCGATAAGACCCGGCGACCCTGTTAAACTAAACTCCTAGACTGATTATATATATGCGCAATAGATTGGACCGTACATAAT
TAATTGGAATAGGAACTAATGTGCATGAATTAGCCAACACTCCTTCATGTCCTCGTGTAAGCCATCGCAATAAACTAGGTTTTCCTTACAGGGTGTCATGTTTCGGTTACAATATAATAA
TCGATGTTAGGCGAGGTTCGGTGAGCCCCAAAAATCCCTGAAATTCCACAACGAAACTACTCCATCACAACGATAACAAAAAAAAGAAAGCGAAGTTTTATAAAATAATGTTTCGGTTTT
TTCTTTTTTCCTTCCTGGGCTTGCTCTGACGTTGCCCATGTTCTAAAAGCATCTTCTTATTCATTAAAGATTTTTTGGGGGTATTCGTGGGTTTCCATGAGCTCTTAGGCCCCCTATTCC
GTGATGTCTAGGGGGACAAATGGCAAGTTTTCTCCACTACAATCGTATTCCCGAACGCAATAATTACTATTTTCAGTGGGGTTGGTGGGGGCTTTTCGGTCAACTCGGGGCCGGTCCGAC
GTGTCACGGTTGTCTTCTTGATGCATGCAACCTTGGGTTACGTGGACTTGCGAGTCATTAATGCCCGGTTGACGTAAAGAACCCTAATTTCCACAGTTCCTGTTCTTGATTTTGATTGCT
GCCGATGGTTGCAGATCATAATGCTGAGCGCCTCGGCGAATCGATTATCGAGGTTGAAGGAGCAGGCGGAGGAGTACGCAGCTCTGATCATGGAAGAACTGGATCCGGAGCAGCTCGGCT
ACATCGAGAGGTCGGTCCATTTTTTTATTTTATTTTTATGATTTCGCCCTAAAATCTAAAGATAATGCAAAGTCCAAAATACATATATTTCGTCAGACTATAGTTTTCCCAATAGTTAGT
GGGGATACGCATCTTAATCGAGTCAGCTTTGACCAGTAGTTTTTTTATAAGAGTAATACTCGAGGGGGTCTAAGTATTAGTTACGACTTTTCCTCCTAAAGTCCATGTTTGGCGAAAAAT
GGAAATTTTTTTCTAAGAATTGGGTAACCGTGTTGTTGAACCGCGCAAGAAGAAAATAGTAAAAGCTTATGACTATATATAAATATATGTGTGTATATATTCATATTAATATTTGTAGAC
GTAGCTAGCGCATTACTTTTGGATTGACCAAATTAGATTGTTTAGAAGGCAAAAGCAGCTGACGAAATTTCTAAAATTTTTGGTAGTTGAGCGACTTTTCTTCGACCTTCAAGCCCATTT
CTTCTAAAAGTTTCGGTAATTAGGGTTTCTCCTTTCCGTGGTAACTTTGTTATTTCTAGGTCAGTGCAATAATTGGTACGACCGATAAGCCACGCATATCATGTCATCTTCCTTACTTTG
TTGTCCTTAATCAAGCAATAAATCTAGGGTCCGATTGAATGGACTTAAATCAAAATGGCAAAAAATAAAATAAAATTTGTGGCCGATACATTAACACAAGCTGTTTTATCATGTAGTTAC
AGCCAAAAAGAAGGGTAGCCTTAACATAATAAATTCTCAAATAATTATATTCGTAATCGTTTTATTTATTCCTTAAGTATATAGCAAGAATAGGTGAGTTCCGGTCTTTCTGGGTCCGAG
AGCATGTCCATCGCGCCTGCGTTTGACACCTTTCCTGGCTGTACTCACACGACGAATCTTCTGCACTAAATTCTCATTTTTCTTTTCTTTTCTCGGCTGCTAAAGATTTTCCGGGGAAAT
TTCAGTCCTCCCAATGGCGGAGAAAAACCGACGTAGATATGCATCGCGATTGGTGGCATGTAGCTTGTCGGAACGAGTAGGTGGGGGGGGCTCTTCGGGGTGCCCCACGCACGACCGCGT
AGACCACACCCGGTGCACGAAATTTCCCCGCGTGCTGTCCTGTTTCGGTGGTCACCGTCGCTGGGGGGTCTGTCGAGCTTTTTCTCGACCCGATCCCTCTTTTGTCTTTTCCGCCTCGTC
CCATCCCACGATTCCGATCCTAAAGAGACGCTCGTTGAATTCGAGAGTTTCCGTGATGGCGAACATGGGGAACGATGGGAAGCGCCAGACTTCGAGACTAACAACATCTCGTTTTCCTTT
AACTAAAACTGATGTCATCGTATGCGTGGAACGTTTCTTGCTTTTGGTCACATGCGACGGTGACGCATCGATTCCATGGATCGAGGGGCGGTGCCCATGTCATGCACAAAGCTTTCTACT
CATGGCAGAAAAAAAGAGGAGGAAAAATCCCACTTAAAATGTAAATGACATGGGAGAAAAGTAAAATTTTACCGGCTTTAGCTTGCAATTTAGCCTGCAATTTAGCCCCTGAATTCTTGG
TGAAAATCGGATGCAGCTATGGCAACTGGAGACGCTGCTGCTACAGAAGGATACGTACCTAAACTACAGCCAGGCGCTGAGCTACACGAGCCAAGCGCTGAGCCAAAACCTGCAGGGCCT
GAGGAGGAGGAGCCGCATCAGGAGACTGAGCACCAAGTGCCTGTACTATCTGGAAGAGAACTGGAGGAGGATTTGGGTGGTGACCTTGTGGGTCATGATCATGATCGGCCTCTTCACCTG
GAAGTTCGTGCAGTACAAGCAGAAGGCCGCCTTCCAGGTCATGGGCTATTGCCTCCTCACGGCGAAGGGGGCCGCCGAGACGCTCAAGTTCAACATGGCCCTCATCCTGCTGCCGGTGTG
CCGGAACACCATCACTTGGCTCCGCAACACGAGGGTCGGCCTCTTCATACCCTTCGACGACAACATCAACTTTCACAAGAGGTGCGCAAATTTTACCTCTTTCCTAACTTTTGATTTACT
ATATAGGCTATCTCAAATTCATGCCTAATGCTTTTCGTGAAATGCTGTATTATTACCAGAATTGATACTGTGAACTTAGCTACATCCTCAATAGTGAACATTCCATATGTTGTGGATCCA
ATCATGAACCGACAGCTCGAGCAACCCATGCCCAGTGCCCCTAATGCATGCTCCATGACTGATGTGCATATTTTTAAGCTTATAAAAATTTTGGAATAAATTAGGTCCGACGGATGGAAA
TTAAACATGTCTAATCCATCCGTATGATTAAAAATTTCATCTTAATCACGGAACCTAACCCTCCTTTTTGAAATTTCCAATCCTTCGATTATTTTCCACATCATTTAGCTAGTTTTGTCC
TCCTATAGGCGGTGGAAACTTTGGTTGCACACAATTTTTTTCCCTTGGGGACCCACGAGGAGGATTTCTGGTGAAAGTCAACGTGATTGATTTGATCTGGACACTCGTTTTTTAAAGGGA
AAAAAAACTGATTCCTGATATGTCTCTTTGGGTGCACATAGATGACGACGATATGTCCTGTGTTAGAACGCGTATGGTGCAGTGCAAGGCATCATCTTTCTGCTTAAAGGCAGCAAAGGT
TGACAAATGAGAATCTTCCCTTGGGCCAGAGAGATCACGATTGTTTTTGTTTGTATGCAGAGAATTAGAAGAACTTGTGGAAAGCCATAAAGATTGACTCTTTCTTTTTCCTCCCCTTAA
CGAGTTGAAAATTGAGAAAAAAACACGTGGAAAAGGAAACTCTGTTCAGCCTAAAATGATTCCTTGTGATGATTGCGTGTTAGTTTATAGACTATGAAGCTTTTGTTTATATGTATGAGC
TAGTTAAGCTAGGAGATTGACTTCTTAGCGACATAAAGAAAGTATCTCTTGCATTTCCCAAGATCCTTAAGAAGAAACTCTGTTTTGTGGCATTGTAAATTGGCAGGAGAGCAAGAATGC
ATCGATCATTGCTTGAATAAATTTCGATACAGAAAATCACAACTTAAAGCGTGACAAGATACAGATGTGATGCATAGAACAAATGTCGATTGTGATTTTCAGGTTCTGAACATGGAGAGG
AAGAGAGATTGGCTAATCAAATGATAGATTTTATTTTGCAATGTCATTCTAAGTGATAATGTCTGATATGATGCAAAATGCTGCTCAGATATGTAGAACTACGCATGTGATGGGGAATGA
CATTCCTAGGATCTTTTAGGTTGTCTGATTAGTGAAAAAGCAAGAATTCTGAGAAGAGAATGTTTTTTTTTTGAGGTCAGTGATCTTAGCGACGGAAGCAATGTCTCCACCATTTGCATA
ATTACCGGAGTCATGCTTTTTACTGATACTTTGGATTAACGAGAAACTGAAACGTTGTCCCCTTAGCCTAGCAGCTAGTGAATCATCAGTTATTAGTGATGGGATGATACTTGAGTTTCA
GGATTCATAGCAAGAATTGCAACATCTGAATAATATCTTTCTGGTTTGTACATTGGTGCAGACGATTGCTGCTGCTATTGTAGTTGGTGTCATCCTCCATGTGGGTGACCATCTTGCGTG
CGATTTTGTGAGGCTTGAACATGCGTCTAAAGACGTCTATCATAGATACTTGGAGGATGATTTTGGTAATCCGAAGCCGACGTACTTTGATCTTGTCAAGGGGATTGAAGGTGTGACTGG
GATCCTCATGGTGATCTTGATGTTAATAGCCTTCACATTGGCTACCCGATGGTTCCGCCGAAGCCTCGTCAAGTTACCGAAACCATTCGACCGGCTCACTGGTTTCAATGCATTTTGGTA
CTCACACCACCTGTTCGTGCTCGTCTATATCCTGCTCATCATTCACGGAGTCTTCCTTTACCTCGTTCACCACTGGTACCGCAAGACGCGGTACGAATCGTTTTCTTTCCCTGCATTCCA
TGAACTTTCTGAGAATTAGGCATCTTCAATGTGCTGCGTTCTTTTTCCAACATTGAAATATTGAAAGACAGCTGGTGTATTCCTAACGTAGTCGCATCTAAGTCCGCAGGACTTGAGTTT
TGAAATGTGGAGTTTGTGTCCTTGCAGACGTGGATGTATCTTGCTGTTCCTGTATTGCTCTATGCCGGAGAAAGGACCCTGAGATTCTTCAGGTCTGGAATGTACACGGTCCGACTGCTG
AAGAGGTAACAAAAGCATTCCCGCGTCATCCATCTTCCCAATTTGATACTCATCTTCATTCGTTGGGCCTTCAATTAAAATTGTTGACATTTAGAGCGAATCGTCTTGATTGTTTAGGTT
GCGATCTACCCAGGAAATGTCTTGACGTTAAAGATGTCGAAGCCTCCCCAATTTAAGTACAAAAGCGGGCAGTACATGTTTGTCCAGTGTCCTGCGGTTTCTCCATTCGAGTGTGGTAAG
TCCCCAAGTAATGACGATAAGTGTCACTGAGGACAATGCATTTTGCTTATGGTAATGGCCTTCTTGAGCGGACTGCTCAACTGCATATGGTCTCCTCGCATACATACTGATCTCTTCTCC
CGACACACATTGCCAGGCACCCATTTTCGATAACCTCAGCTCCCGGTGACGACTTCCTCAGTGTTCACATCCGTCAACTTGGCGACTGGACGCAAGAGCTCAAAAGGGTGTTCGCCGAGG
CTTGTGAGCCTCCTGTTGCAGGAAAGAGTGGCCTCCTCAGGGCTGATGAAACAACCAAGAAAAGAGGTGCGCACACTTCCTGTTCCATTCTTTCGTTGTCCACAAGCTATAATTTTCCGA
TAACTGAACATGAGCTTCTGGAATTAATGATAATCAAGACCACATTCCTTTGTTGATTACAGTTTGCCGAAGCTCTGCATAGACGGCCCATATGGCGCTCCAGCACAAGACTACAAAAAA
TACGATGTGTTGCTGCTGGTTGGTCTCGGAATTGGGGCAACGCCTTTCATTAGTATCCTCAAAGATTTAATCAACACCATTGTCAAAAGCGAGGAGCAAGCACAGTAAGTACTACATACT
CTTTAACTTTTTAATTACCTTTCGAACAACATGATCGTGGACTGATGATGCAAATGAGAATGAATTGGCATTGTACCTGTGAGAATTCAAGACCAATTTTCCTTTTGCCTCCTTTCTTTG
TTTGCAGGACTCAGTCACAGATGTCAGTAGGAACTCGGATTTAAGCATCGGGAGCGTTGAGTCACCTGGCCCGAACCGGGTCTCCCCAAGGCGCAGGAAGACTCTGAAAACCACCAATGC
GTACTTCTACTGGGTGACGAGAGAACAAGGGTCGTTCGATTGGTTCAAGGGGGTCATGAATGAGGTCGCGGAGATTGACCAAAGGGGGTAAGAAAGAGTGCTTTCTCTTGAGCCCAATTT
TCAGCTCATTAATCGAATTGATTGAAGTTTTGTCTTTACTGATCACGTTCTGGTGTGGGACTTCTAGGGGGTGATTGAGATGCACAATTATTTGACCAGTGTGTACGAGGAAGGTGATGC
AAGATCAGCTCTCATCACTATGGTCCAAGCTCTTAATCATGCCAAGAATGGGATAGACATTGTGTCTGGGACAACGCGGTAAGTATCCTTCTTCCTCTTCTTCTTTTGTCAATTTAATAT
TTGTTGTTTTCTTTTCCAATCCACAACCGTACGTCACATCCTGAATCGCAAAATGGAAACGTTTGCATTCAGGTAAGGACTCATTTTGCAAGACCCAACTGGAAAAAGGCTTTCAATAAA
CTATGCTCCAAGCACAGCGGTGCAAGAATAGAGGTAATTCTCAACCCAGTTGAATCACAGAAGCTACTTAATCAATCTTCAAATATTCAATTTTTATTCCTTCTTTTTTTGGGTTTCCTT
GAATCAGGTGTTTTCTACTGTGGAGCGCCTGTTCTGGCCAAGGAGCTGAGCAAGCTCTGCTACGAATTCAACCAGAAAGGCCCCACCAAATTCGACTTCCACAAGGAGCATTTCTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA