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Entry information : EgrRboh03 ( Eucgr.F02491 / Egrandis_v1_0.045742m)
Entry ID 10180
Creation 2012-01-25 (Qiang Li)
Last sequence changes 2012-01-25 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-16 (Christophe Dunand)
Peroxidase information: EgrRboh03 ( Eucgr.F02491 / Egrandis_v1_0.045742m)
Name (synonym) EgrRboh03 ( Eucgr.F02491 / Egrandis_v1_0.045742m)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh003]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrRboh03
start..stop		 S start..stop
EglRboh03 1651 0 13..798 29..814
EguRboh03 1643 0 1..798 1..798
JregRboh08 1163 0 13..798 16..803
EgrRboh06 1147 0 13..798 51..857
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 34547463..34547497 33 N° 2 34548047..34548255 207 N° 3 34548369..34548531 161 N° 4 34548633..34548681 47
N° 5 34548763..34548876 112 N° 6 34548958..34549764 805 N° 7 34549891..34549986 94 N° 8 34550089..34550204 114
N° 9 34550296..34550398 101 N° 10 34550537..34550628 90 N° 11 34550712..34550871 158 N° 12 34550957..34551091 133
N° 13 34551192..34551320 127 N° 14 34551416..34551494 77 N° 15 34551648..34551757 108  
join(34547463..34547497,34548047..34548255,34548369..34548531,34548633..34548681 ,34548763..34548876,34548958..34549764,34549891..34549986,34550089..34550204,345 50296..34550398,34550537..34550628,34550712..34550871,34550957..34551091,3455119 2..34551320,34551416..34551494,34551648..34551757)


exon

Literature and cross-references EgrRboh03 ( Eucgr.F02491 / Egrandis_v1_0.045742m)
DNA ref. Phytozome 12:   scaffold_6 (34547463..34551757)
Protein sequence: EgrRboh03 ( Eucgr.F02491 / Egrandis_v1_0.045742m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   798
PWM (Da):   %s   91670.82 Transmb domain:   %s   i245-264o331-353i381-403o429-451i617-634o
PI (pH):   %s   9.95
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNMLLHKTQVIGTTRKRNVSYGGIPRMERTASSASRGLMSLRFLDRTITGKEGDAWRSIEKRFHQHATNGQLSRDKFGVCGMGDSKEFAGELFDALSRRRKVNAENGISIDQLRQFWEDM
TTRELESRLQIFFDMCDKNGDGRLTEDEVKVIVLSAASNRLSNLQQQAASHASLIMERLDPDHQGYIEMWQLKTLLREMVNPDQRSKSSVNSQNLTRTMLPKGYRNPMSRLVHKNIERIH
DNWRRIWVVGLWLVANMILFLWKFNKTRHGPAFDITGYCLCYAKGSAETLNLNMALVLLPVCRRTLTKLRSSFLGTFIPFDDNINFHKIIALAIAIGSVVHIAMHFMCNFPRITSCPKSQ
FKQVFGPYFHNRQPHYIDLVNNLSSTTGVLMFMMMAFSFTLATHWFRRNIIKLPWGLHHLAGFNAFWYAHHLLAVAYVFFILHGYFLVISRPWYTKTAWMYVMVPILLYTSERAFTSASE
LQHRVDIVKAIVYSGNVLALYMSKPPGFNYNSGMYLFVKCPDISKFEWHPFSITSAPGDAFLSVHMRALGDWTTELRNRFAVCEPPSKKPGKGGLTKMATRTSHNLEELQEKFPKIFIKG
PYGAPAQDYEKYDILLLIGLGIGATPFISIIKDILNHVKLNKLQDSDQDQSSGARKGPKRAYFYWVTREQNSFEWFKGVMDDIAERDDHNVIEMHNYLTSLYEEGDARSALIAMVQKLQH
AKNGVDIFSESQIKTHFARPNWRKVFSEIAMRHKSSRIGVFYCGSSVLTKTLRKLCQELSLESSTRFQFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_6, 14 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATATGCTTCTGCACAAAACGCAGGTTATTGGGGGTAAGTTAAATTTTTTTTTTTTAGTACAAGGTATCGTAAGTTGTCCCATGGAAATTGCCGTTTTTGTAGTATTTTTACATTGG
AAAAACATAATTTTTGTTTTCGGTTGATCTTATGAGATGTTTAAGAATCGGTTGGCTTTCCAGTTACGTGGTGCAACGGCATTACTTTCAGGGGTGGTCAAAAAACAATTCCAGGTACAA
AAAAGTGTTCCTCCATTGTAATGGTGTGCGTTGGTTACAATTGTTCTTGTTTCATTTCCTATCTTTAGGCTTTCCTCTTCCTCTTCCGCCTCTTAAAACTCACCATCTTTACTTCTCTTT
TCATCTTTCATCCTCATACTTTTCCCAGTTACCCGAACCCTCGGAGGGAATACACCCAAAACCACAAATTGTTCATAGTTGCAATGAGGGTTCATCATGACCGTAACGGGAGTTCCGCTA
GATGCTCTCTTGAAAGCATTGAGATGGACAATGCGGTGGAAACCAGTGAGAGCTCCGCCCCGCCGCATCCTAATGACATACCATTGCCATCGAGGCGGAACTCAAGCACGACGCGGAAGA
GGAATGTATCGTACGGCGGCATCCCTAGGATGGAAAGAACGGCATCCAGTGCCTCTCGAGGCCTCATGAGCTTGAGGTTTCTGGATAGGACAATTACCGGGAAGGAAGGAGATGCCTGGA
GATCAATCGAGAAGCGTTTCCATCAACACGCGACGAACGGCCAACTCTCGAGAGACAAATTTGGAGTCTGCATTGTGGTTGATCCTTAGAAAGTCTTGCTGCTATCTGAATCATGATTTT
CCAGATAATAATAATAATAATAATTGCACAATTTGATTGAGAAGTGACATTGTTTTATTCTGCGTGGAAGGAATGGGAGATTCCAAGGAATTTGCAGGAGAGTTATTCGACGCCTTATCA
AGACGGAGGAAAGTGAATGCCGAGAATGGAATATCAATAGACCAATTGAGACAATTTTGGGAAGACATGACGACTCGAGAACTCGAATCCCGACTGCAGATATTCTTTGATATATGTAAA
GCAACTCTCGTCCATCTCCTATTATCGTTCGCAACCTAAAGCGTACATTGCGTTGCTGGTAATACATGTGATGAAGTTTCGCGACGAATGCTGCAGGTGTGACAAGAATGGTGATGGGAG
GCTAACTGAGGATGAGGTAAAAGAGAGGTGAGGCAAAAGGAGACTTACTAATCACTCGTTTAGCGTGTCCTTTGGGCTCTTTTATGATGGACTGGAAATTTTTCAAAGGTGATAGTGTTG
AGCGCCGCCTCGAATAGGCTGTCAAATCTCCAGCAGCAAGCGGCATCTCACGCATCTCTGATCATGGAAAGACTTGATCCCGACCATCAAGGATACATCGAGAGGTACCGAGTCAGATAG
TCCATCATGTCCTGTTCGAGTTCGTGTTCCTCCCATGTTGTTGTTCATCGCTTCTTTGTTTTCAGATGTGGCAATTAAAGACTCTCCTGAGAGAAATGGTGAACCCTGATCAAAGGAGCA
AGTCGTCAGTGAATTCTCAAAACCTGACCAGAACCATGCTTCCCAAAGGATACAGAAACCCAATGAGTCGGCTCGTGCACAAGAACATCGAAAGGATCCATGACAATTGGAGGCGAATAT
GGGTCGTCGGGCTGTGGCTGGTCGCAAACATGATCCTCTTCCTTTGGAAGTTTAACAAAACGAGGCACGGCCCCGCCTTTGACATCACGGGCTATTGTCTTTGCTACGCCAAGGGCTCTG
CCGAGACACTCAATCTCAACATGGCTCTCGTCCTCCTCCCCGTATGCAGAAGAACTCTCACGAAGCTACGCTCGTCCTTCCTTGGTACCTTCATACCATTCGACGACAACATAAACTTCC
ACAAGATAATCGCGCTGGCCATAGCTATAGGATCTGTCGTTCACATTGCAATGCATTTTATGTGCAACTTCCCCAGGATAACTTCCTGCCCAAAATCACAATTCAAGCAAGTGTTTGGCC
CGTACTTCCATAATAGGCAACCTCATTACATCGACTTGGTCAATAACTTGTCCAGCACCACCGGGGTTCTCATGTTCATGATGATGGCCTTCTCTTTCACACTGGCGACTCATTGGTTCA
GGAGAAACATCATCAAGCTACCGTGGGGGCTCCATCATTTAGCAGGATTTAATGCCTTCTGGTACGCACATCATTTGCTAGCCGTTGCCTATGTCTTCTTCATACTTCACGGCTACTTCC
TCGTGATCAGTCGACCTTGGTACACGAAAACGCGGTAAGTACACAATGGTCTAATTCCTTATTCTGTTCACCATTAATTCATAAGGCCTGAATTCTCCGGTCGTACCATCATTCCTCTGA
AAACACGGCAAGAATCATTATACGGTTGGACTTTATGCAGGCATGGATGTATGTGATGGTCCCAATCCTACTCTACACAAGCGAGAGAGCATTCACATCTGCTTCTGAACTCCAACATCG
AGTTGATATCGTTAAGAGGTATCACTCACTTTACCGAACTGCCGTGTTCCACATTCCTTTTTGGTTTACACGAATCTTAGTGCTACGATAAATTCATGCTCGGCTCAAAAAACTTTTCAG

GCCATTGTTTATTCTGGAAACGTCCTTGCATTGTACATGAGCAAGCCTCCAGGTTTCAACTACAACAGCGGAATGTACCTTTTCGTCAAATGCCCTGATATATCAAAGTTCGAATGTGGT
GTATAGAACATAATCGCTGAAACCTATTTACTCGTCATACCCCTATGGCTTTTATTGCTGAAACTCATCGGTGTTTTTGCTCGGGACAGGCATCCTTTCTCCATTACTTCCGCACCGGGA
GATGCCTTCTTGAGTGTTCACATGCGAGCCTTGGGCGATTGGACTACAGAGCTCAGGAATAGATTCGCCGAGAGGTATATTCTATTGATTTTCTCATTCGTTTTTAGATTGCACAACCCA
TGGACTCTAGTCGAAAGATATAAAAAAATCACCACATTTTCCATGTTGAGTATCGAACTCAATGTTCATCTTCTTCAATGAGAAATTGTTAGGTTTGTGAGCCACCAAGTAAAAAACCAG
GGAAGGGAGGTCTAACGAAGATGGCCACGAGAACATCCCACAACTTGGAAGAGTTACAAGAGAAAAGTGAGTGAAAATTATGGCTAAATTCTGTCCCACCCCTTCCATGCAAATGCTTTC
GCTCTAACAGATATTCATTGTTGTCCAAGGTTTCCAAAGATTTTCATCAAGGGGCCATACGGTGCTCCGGCTCAGGACTACGAGAAGTATGACATCCTCCTACTCATCGGTCTTGGCATC
GGAGCGACTCCTTTCATCAGCATCATAAAAGATATCCTGAATCACGTCAAGTTGAATAAGCTCCAAGCACAGTAAGTAGAAAAGGGAAAAACACTCGCACAAGCAATTTCAAATTCAGTT
AGCACGACCATTTGCCAAAACTATTGATGCATGCAGGATTCGGATCAAGATCAATCATCAGGGGCAAGAAAAGGTCCTAAAAGAGCATACTTTTACTGGGTTACGAGGGAACAAAACTCT
TTCGAGTGGTTCAAGGGCGTCATGGATGATATTGCAGAAAGAGACGATCATATGTCGGTTCGCCATTTCCAAAACTACCAAGTGTGATGAATCCTCCAATTAATTATAGTTTTTCAACTA
AAATGTCGCTTTGGGTACTGGTGATTGTTGTAGAATGTAATAGAGATGCACAACTACCTGACCTCTCTATATGAGGAAGGAGATGCGAGATCAGCACTCATTGCCATGGTCCAAAAGTTG
CAGCACGCGAAGAATGGTGTCGACATCTTCTCGGAAAGTCAGAGGTAACTCTTGATCAGTCACACAAAAGAAAAACAAAGAAACATTCACAGCACAATGCACCTATTTAGGCTGTCCTTT
AACGTTGCTTGTTCGACAGATAAAAACTCACTTTGCGAGGCCTAATTGGAGAAAGGTGTTCTCTGAAATTGCAATGCGGCACAAGTCGTCTCGTATAGAGGTACGACATCACGTCCGATG
AACGTGTCAACATAATGGCACTTGATTTGGTTGTTCTAGCCAGTTTGGAACATGAACCTGTGATTTTCTAACTGTTGGAACTTGAACATTCTACCAATTCGGGTCTGATATGTCGGTAAT
AATTTTCCTGCAGGTGTTTTCTATTGTGGGAGTTCGGTGCTCACCAAAACACTGAGGAAGCTATGTCAAGAACTCAGCCTAGAGTCGTCAACTCGCTTCCAATTCCACAAGGAAAACTTT
TAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATATGCTTCTGCACAAAACGCAGGTTATTGGCACGACGCGGAAGAGGAATGTATCGTACGGCGGCATCCCTAGGATGGAAAGAACGGCATCCAGTGCCTCTCGAGGCCTCATGAGC
TTGAGGTTTCTGGATAGGACAATTACCGGGAAGGAAGGAGATGCCTGGAGATCAATCGAGAAGCGTTTCCATCAACACGCGACGAACGGCCAACTCTCGAGAGACAAATTTGGAGTCTGC
ATTGGAATGGGAGATTCCAAGGAATTTGCAGGAGAGTTATTCGACGCCTTATCAAGACGGAGGAAAGTGAATGCCGAGAATGGAATATCAATAGACCAATTGAGACAATTTTGGGAAGAC
ATGACGACTCGAGAACTCGAATCCCGACTGCAGATATTCTTTGATATGTGTGACAAGAATGGTGATGGGAGGCTAACTGAGGATGAGGTAAAAGAGGTGATAGTGTTGAGCGCCGCCTCG
AATAGGCTGTCAAATCTCCAGCAGCAAGCGGCATCTCACGCATCTCTGATCATGGAAAGACTTGATCCCGACCATCAAGGATACATCGAGATGTGGCAATTAAAGACTCTCCTGAGAGAA
ATGGTGAACCCTGATCAAAGGAGCAAGTCGTCAGTGAATTCTCAAAACCTGACCAGAACCATGCTTCCCAAAGGATACAGAAACCCAATGAGTCGGCTCGTGCACAAGAACATCGAAAGG
ATCCATGACAATTGGAGGCGAATATGGGTCGTCGGGCTGTGGCTGGTCGCAAACATGATCCTCTTCCTTTGGAAGTTTAACAAAACGAGGCACGGCCCCGCCTTTGACATCACGGGCTAT
TGTCTTTGCTACGCCAAGGGCTCTGCCGAGACACTCAATCTCAACATGGCTCTCGTCCTCCTCCCCGTATGCAGAAGAACTCTCACGAAGCTACGCTCGTCCTTCCTTGGTACCTTCATA
CCATTCGACGACAACATAAACTTCCACAAGATAATCGCGCTGGCCATAGCTATAGGATCTGTCGTTCACATTGCAATGCATTTTATGTGCAACTTCCCCAGGATAACTTCCTGCCCAAAA
TCACAATTCAAGCAAGTGTTTGGCCCGTACTTCCATAATAGGCAACCTCATTACATCGACTTGGTCAATAACTTGTCCAGCACCACCGGGGTTCTCATGTTCATGATGATGGCCTTCTCT
TTCACACTGGCGACTCATTGGTTCAGGAGAAACATCATCAAGCTACCGTGGGGGCTCCATCATTTAGCAGGATTTAATGCCTTCTGGTACGCACATCATTTGCTAGCCGTTGCCTATGTC
TTCTTCATACTTCACGGCTACTTCCTCGTGATCAGTCGACCTTGGTACACGAAAACGGCATGGATGTATGTGATGGTCCCAATCCTACTCTACACAAGCGAGAGAGCATTCACATCTGCT
TCTGAACTCCAACATCGAGTTGATATCGTTAAGGCCATTGTTTATTCTGGAAACGTCCTTGCATTGTACATGAGCAAGCCTCCAGGTTTCAACTACAACAGCGGAATGTACCTTTTCGTC
AAATGCCCTGATATATCAAAGTTCGAATGGCATCCTTTCTCCATTACTTCCGCACCGGGAGATGCCTTCTTGAGTGTTCACATGCGAGCCTTGGGCGATTGGACTACAGAGCTCAGGAAT
AGATTCGCCGAGGTTTGTGAGCCACCAAGTAAAAAACCAGGGAAGGGAGGTCTAACGAAGATGGCCACGAGAACATCCCACAACTTGGAAGAGTTACAAGAGAAGTTTCCAAAGATTTTC
ATCAAGGGGCCATACGGTGCTCCGGCTCAGGACTACGAGAAGTATGACATCCTCCTACTCATCGGTCTTGGCATCGGAGCGACTCCTTTCATCAGCATCATAAAAGATATCCTGAATCAC
GTCAAGTTGAATAAGCTCCAAGCAGATTCGGATCAAGATCAATCATCAGGGGCAAGAAAAGGTCCTAAAAGAGCATACTTTTACTGGGTTACGAGGGAACAAAACTCTTTCGAGTGGTTC
AAGGGCGTCATGGATGATATTGCAGAAAGAGACGATCATAATGTAATAGAGATGCACAACTACCTGACCTCTCTATATGAGGAAGGAGATGCGAGATCAGCACTCATTGCCATGGTCCAA
AAGTTGCAGCACGCGAAGAATGGTGTCGACATCTTCTCGGAAAGTCAGATAAAAACTCACTTTGCGAGGCCTAATTGGAGAAAGGTGTTCTCTGAAATTGCAATGCGGCACAAGTCGTCT
CGTATAGGTGTTTTCTATTGTGGGAGTTCGGTGCTCACCAAAACACTGAGGAAGCTATGTCAAGAACTCAGCCTAGAGTCGTCAACTCGCTTCCAATTCCACAAGGAAAACTTTTAG

Retrieve as FASTA