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Entry information : Egr1CysPrx[P]01
Entry ID 10184
Creation 2012-01-25 (Qiang Li)
Last sequence changes 2013-03-13 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-02-24 (Christophe Dunand)
Peroxidase information: Egr1CysPrx[P]01
Name Egr1CysPrx[P]01
Class 1-Cysteine peroxiredoxin     [Orthogroup: 1CysPrx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Egr1CysPrx[P]01
start..stop		 S start..stop
Egr1CysPrx[P]02 273 6.73e-96 5..136 60..191
Egu1CysPrx[P]01 258 5.01e-91 1..136 1..136
Ecam1CysPrx[P]02 251 1.86e-87 5..135 60..189
Egu1CysPrx[P]02 249 2.14e-86 5..136 60..191
Literature and cross-references Egr1CysPrx[P]01
DNA ref. Phytozome 12:   scaffold_7 (36613686..36613074)
Protein sequence: Egr1CysPrx[P]01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   136 (512)
PWM (Da):   %s   14993 (55350.0)  
PI (pH):   %s   10.2 (4.45) Peptide Signal:   %s   cut: 23 range:23-534
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
VGVQPGAKVT YPIIANLNRE xKIKELNLVE PEEKDASGKQ VPSRALHIVG PDKKIKLSFL YPTSMGRNMD EVARVLDSLQ RAMKHKIATP CNWKPGDAVV ISLSISNEQA KEMSPQGFKT 
ADLLSRKYYL RFTHID 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic (5' end is missing). No prediction from phytozome. No EST. complement(join(36613074..36613322,36613526..36613686)).
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTTGGGGTGC AGCCCGGGGC CAAGGTGACA TACCCGATAA TCGCCAACCT GAATAGAGAA AAnAAAATCA AAGAGCTCAA CCTGGTCGAG CCAGAGGAGA AAGACGCTTC AGGGAAGCAA  GTCCCTTCTA GAGCTCTGCA CATCGTCGGT CCTGATAAGA AGGTATACAT GCCCTTCTAC CTTTTCCTTC TCCCGTTAAT TAAACTTGTA TCAAATGAAA CAAACTGCAT AAACCAATGC  CATCTTGTGC ATGTCTGTGA TATGTGTATT ACTTAAAGTA GCATAAACCA TTTATCCCAT TTAAACAGAA CAGATGCAGC AGGACTCTGG ATCATCTATT TTCACAATAT AACATAATTT  GTTAGATCAA GCTGAGTTTC CTGTACCCCA CGAGCATGGG AAGGAACATG GACGAGGTGG CGAGGGTGCT GGACTCCCTG CAGAGGGCGA TGAAGCACAA GATCGCCACC CCATGCAACT  GGAAGCCAGG GGACGCGGTC GTCATCTCGC TGTCCATCTC CAACGAGCAG GCCAAGGAGA TGTCCCCGCA GGGCTTCAAG ACCGCCGATC TTCTGTCCAG GAAGTATTAC CTCCGCTTCA 
CTCATATCGA TTAG 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTTGGGGTGC AGCCCGGGGC CAAGGTGACA TACCCGATAA TCGCCAACCT GAATAGAGAA AAnAAAATCA AAGAGCTCAA CCTGGTCGAG CCAGAGGAGA AAGACGCTTC AGGGAAGCAA  GTCCCTTCTA GAGCTCTGCA CATCGTCGGT CCTGATAAGA AGATCAAGCT GAGTTTCCTG TACCCCACGA GCATGGGAAG GAACATGGAC GAGGTGGCGA GGGTGCTGGA CTCCCTGCAG  AGGGCGATGA AGCACAAGAT CGCCACCCCA TGCAACTGGA AGCCAGGGGA CGCGGTCGTC ATCTCGCTGT CCATCTCCAA CGAGCAGGCC AAGGAGATGT CCCCGCAGGG CTTCAAGACC 
GCCGATCTTC TGTCCAGGAA GTATTACCTC CGCTTCACTC ATATCGATTA G 

Retrieve as FASTA