View Redoxidase 10317

Entry information : EcamPrx[P]80 ( EcC054530.50)

Entry ID	10317
Creation	2012-01-30 (Qiang Li)
Last sequence changes	2013-02-06 (Qiang Li)
Sequence status	theoretical translation / pseudogene
Reviewer	Christophe Dunand
Last annotation changes	2016-03-12 (Christophe Dunand)

Peroxidase information: EcamPrx[P]80 ( EcC054530.50)

Name (synonym)

EcamPrx[P]80 ( EcC054530.50)

Class

Class III peroxidase [Orthogroup: Prx034]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus camaldulensis [TaxId: 34316 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EcamPrx[P]80 start..stop	S start..stop
EcamPrx78	293	2.94e-101	1..156	1..156
EguPrx287	292	6.04e-101	1..156	1..156
EgrPrx81	292	6.23e-101	1..156	1..156
EguPrx78	292	6.45e-101	1..156	1..156

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10317' 'join(1..273,785..922,1527..1583)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1..273	271	N° 2	785..922	136	N° 3	1527..1583	55
join(1..273,785..922,1527..1583)

Literature and cross-references EcamPrx[P]80 ( EcC054530.50)

Protein sequence: EcamPrx[P]80 ( EcC054530.50)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	156 (125)
PWM (Da):	16744.36 (13374.7)
PI (pH):	8.06 (7.85)	Peptide Signal:	cut: 32 range:32-156

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MPHLTSHSSPLTCSSTLFIALILFCSQPNRSTTAAAANATGRHRQ
TSFNYYTKSCPQVEQLIGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILISSKPGSKELAEKDAIDNKDLRAEGFKTIAKTKSFVENKCPGFVSCADILAIAARDFV

Retrieve as FASTA

Remarks

Pseudogene sequence from genomic. Incorrect prediction from kazusa (3' end is missing).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCCCCATCTCACTTCTCATTCTTCCCCTCTAACTTGCTCATCGACCCTTTTCATCGCCCTCATCCTCTTCTGCAGCCAACCGAACCGATCCACCACAGCTGCTGCCGCCAATGCCACA
GGCCGCCACCGCCAGACGTCGTTCAACTACTACACCAAGTCGTGCCCCCAGGTCGAGCAACTCATTGGGTCGGTCACGAGCCAGCAGTTCAAGGAAGCGCCGGTCTCTGGGCCGGCCACC
ATCCGGCTCTTCTTCCATGACTGCTTCGTTGAGAGGTAAAATCTCTCTCTCTCTCTCTCTGCACTTACTTTCACGTGCATGCAATAGCAGCAGAGGAAGTCAATATTCAGGCAGATGCTA
CTAGCAGTTGAGCAACTCCCCACATTTTGAGCGTCTTTTGTTATCTATGGTGACCGAATCCTTGCATATTCTTGTTTCTACACGAATGAGTCCGTATACAACATCACTAAAAGAAATTAC
AATTTTCATCGGCTAATCTTACCAAAAATTCAATTCAACCCTCCGGTGAGTGTTTCGTGTTTTGTTATTATTGCATTCCCCGAACCTGCCATAACTGTCAATCAAAGTCGGCCACGCATG
GATCCCGAGTCGATAATTCTCTTCATTTTCTTAGCAAGCGAGAGAATCTACCATGAAAAACATGGAGAATCATCAACTAGCGAGATTACTATCGGTAAACGCCGTTCATTTGTTAATCAA
TCGAGTAGGGCGATAATCCTAGCATAGAAACTACTGACTCTGCATGAGTTATGACCGATGTGGAAGGGATGTGACGGGTCGATATTGATATCGAGCAAGCCCGGAAGCAAGGAGCTGGCT
GAGAAGGACGCGATTGACAACAAAGATTTGAGGGCGGAGGGATTCAAGACAATCGCGAAAACCAAGTCCTTCGTGGAGAATAAGAGGTGCTGCATGAGAACATTTCTCATTCTCACAATT
TTTGTTCTTTAGTCCCCCGGAACAAAAAAAAAAAAAAAAAACAGAAACCCGTTTGGTAACGCCAAATTGTTTTTCTATTCCCCGGAATAGAAAGTTAGCCCGGGAATAGATTTAAAGCAG
AAATGAGAAGCAAAAAAAAAAAAATTGCTTCTGTTCCCGGGAACAATTTCTAGAAATAAGCTACTTTTCTTTTTTATTTTTCTTTTATTCCTCTCTCTTGCCGCAGCCACCTCCGACCGC
CCAGAGCCACCGCCGACCGCCGCCGGTCACCGGCACCGCCGGTTGCCGTCGCCGTCATCAGCCGCCGTTGCTGGTCGCCGCCGCCGAGCGGCTCGGCAGCGGCAATCCGTGAGCAAGAAT
AAAAAAACGAATAAATACAAAAAAGAAATTATTGCGTTACCAAACACATTTCTATTCTTTTTCTATTCCAATAGTAGAAATTTTGTGTAGTTACCAAACGGGTTATTTTACTTAGAAATT
GTTCCCCAAAATAGAAATAGAAAAGAATTATTTCTGAAAAAAAAAAAAAACTCTTCCCCAGCTAAAAAGTGTTACCATTCGCACCCTAAATGCCCCGGCTTCGTTTCTTGTGCTGACATT
CTCGCCATCGCTGCCAGAGACTTTGTT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA