View Redoxidase 10516

Entry information : PoVP01_PC9 (VP1)

Entry ID	10516
Creation	2012-02-21 (Christophe Dunand)
Last sequence changes	2017-04-28 (Catherine Mathe)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-04-28 (Catherine Mathe)

Peroxidase information: PoVP01_PC9 (VP1)

Name (synonym)

PoVP01_PC9 (VP1)

Class

Versatile peroxidase [Orthogroup: VP001]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Pleurotaceae Pleurotus

Organism

Pleurotus ostreatus (Oyster mushroom) [TaxId: 5322 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PoVP01_PC9 start..stop	S start..stop
PoVP01_PC15	729	0	1..358	1..358
PoVP01_IFO30160	725	0	1..358	1..358
PpulVP01	702	0	1..358	1..359
PoVP03_PC9	578	0	1..348	1..347

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10516' 'complement(join(3291892..3291920,3291979..3292018,3292076..3292248,3292310..3292345,3292405..3292414,3292484..3292553,3292608..3292688,3292740..3292747,3292804..3292840,3292891..3292966,3293019..3293140,3293198..3293335,3293390..3293448,3293500..3293633,3293685..3293748))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	3293685..3293748	62	N° 2	3293500..3293633	132	N° 3	3293390..3293448	57	N° 4	3293198..3293335	136
N° 5	3293019..3293140	120	N° 6	3292891..3292966	74	N° 7	3292804..3292840	35	N° 8	3292740..3292747	6
N° 9	3292608..3292688	79	N° 10	3292484..3292553	68	N° 11	3292405..3292414	8	N° 12	3292310..3292345	34
N° 13	3292076..3292248	171	N° 14	3291979..3292018	38	N° 15	3291892..3291920	27
complement(join(3291892..3291920,3291979..3292018,3292076..3292248,3292310..3292 345,3292405..3292414,3292484..3292553,3292608..3292688,3292740..3292747,3292804. .3292840,3292891..3292966,3293019..3293140,3293198..3293335,3293390..3293448,329 3500..3293633,3293685..3293748))

Literature and cross-references PoVP01_PC9 (VP1)

DNA ref.	JGI genome: scaffold_2 (3293748..3291892)
Cluster/Prediction ref.	JGI gene: 137760 115087 [Incorrect prediction]

Protein sequence: PoVP01_PC9 (VP1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	358 (336)
PWM (Da):	37869.74 (35579.5)
PI (pH):	4.44 (4.39)	Peptide Signal:	cut: 23 range:23-358

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MTFASLSALVLAFAATVQVAQAVSLPQKRATCAGGQVTANAACCVLFPLMEDLQKNLFDDGACGEDAHEALRLTFHDAIGFSPSRGVMGGADGSVITFSDTEVNFPANLGIDEIVEAEKP
FLARHNISAGDLVHFAGTLAVTNCPGAPRIPFFLGRPPAKAASPIGLVPEPFDTITDILARMDDAGFVSVEVVWLLSAHSVAAADHVDETIPGTPFDSTPNLFDSQIFIETQLRGISFPG
TGGNHGEVQSPLKGEMRLQSDHLFARDDRTSCEWQSMTNDQQKIQDRFSDTLFKMSMLGQNQDAMIDCSDVIPVPAALVTKPHLPAGKSKTDVEQACATGAFPALGADPGPVTSVPRV*

Retrieve as FASTA

Remarks

Complete sequence from genomic (14 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGACTTTCGCTTCGCTTTCTGCGCTCGTCCTTGCCTTCGCTGCGACTGTCCAAGTCGCTCAAGGTGAGCCACCGCGGCCCTTTCTACTGATTAGGCTAACACGACGTGCTTCAGCTCTG
TGTCTTTGCCTCAGAAACGCGCAACTTGTGCTGGCGGACAAGTTACCGCCAACGCGGCCTGTTGTGTCCTCTTCCCGCTCATGGAAGACCTACAGAAGAACTTGTTCGACGACGGCGCAT
GCGGCGAAGATGTACGCTCACTCAATTTACTACGACCCCTTACTTATTGCTATCTATGCCAGGCGCGCATGAAGCCCTTCGCCTGACGTTCCACGACGCCATTGGATTCTCTCCTTCTAG
GGGGTAGGTCTTCGCCCATTTTGTATTGCGTGCCTGTTATTGATTTGTCGAGGACAGCGCGTTATGGGAGGTGCCGACGGCTCTGTCATCACATTCTCTGATACTGAGGTTAACTTCCCT
GCCAACCTTGGTATCGATGAGATCGTCGAAGCTGAGAAACCGTTCCTTGCAAGGCACAACATCTCCGCAGGCGATTTGTACGCTATTCACTGGCATATTTGAGACTGAGGATCGACACTC
ACTACTTTCCGCAGGGGGTTCACTTCGCCGGCACCCTCGCCGTTACCAACTGTCCTGGTGCTCCGCGAATCCCGTTCTTCTTAGGTCGCCCTCCAGCCAAGGCCGCATCACCCATTGGAT
TAGTTCCGGAACCATTCGGTAAGCCGCTGTTTTCGTGACTTTGCCGCAGACTGCTAACGACTTTGAATAGATATACCATCACAGATATCCTGGCCCGAATGGATGACGCTGGATTCGTCT
CTGTCGAGGTTGTCTGGCTCCTTTCCGCGTACGCTAGACACCATTCGATCCCGAAACTATGGCTGACATAGCGTACAGGCGCACTCTGTCGCTGCAGCTGATCATGTTGACGAAACTGTA
AGCATTACCCCAAAAATTAACGATGTTCGAAGCTGACTTCACTTTTTGTAAAGATATTCCTGGGTAAATTGTGCATACTAGCTTATTATTCTCTTGTGGCTCACACGCACTCAGAAAACG
CCGTTCGACTCAACGCCAAACCTTTTCGATTCACAAATCTTCATCGAGACGCAACTCCGCGGAATTTCCTTCCCAGGGTAATCAATTCTCCTAATGCCCAATCCACGTACATATTGCTTA
CTTGTTGATAGCACACTGGTGGGAATCACGGCGAAGTACAATCCCCACTCAAGGGTGAAATGAGACTCCAGTCAGATCACTTGGTTAGTCTTTACATTGCCCTCTTGCACTGAGAAGCGA
TCTCTAACATGACATGCGTACCGATTTGACAGTTTTCGCTCGAGGTACTTGAAACTATTCATTCATAATAATATTTCCCCATTGAAACATCCAAATGTATCAGACACGATAGGACATCCT
GCGAATGGCAGTCCATGACTAGTAAGTATCATGTTCTATCGCTTCCATTTCTCCTCCTAAGCTCACTATCAACGATAATTAGACACGATCAACAGAAGATTCAAGACCGCTTCTCCGACA
CGCTGTTCAAGATGTCGATGCTTGGACAAAACCAGGACGCCATGATCGATTGCTCCGATGTCATCCCCGTCCCCGCTGCCCTTGTAACCAAACCCCATCTCCCCGCCGGGAAGAGCAAGA
CCGACGTTGAACAAGCCGTACGTCGCGCACTGTATCAGAGATCTCGCAACGTCGCTGAATTGTTTCCTCTCCAGTGTGTGCCACTGGCGCCTTCCCTGCTCTCGGTGCTGACCCTGGTGA
GTAAGCAGGCGATGTAGACACCAGAAAACCTCTTACCCTTTGATTCTTCTTTAGGCGCCCAGTCACTTCTGTTCCTCGTGTGTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGACTTTCGCTTCGCTTTCTGCGCTCGTCCTTGCCTTCGCTGCGACTGTCCAAGTCGCTCAAGCTGTGTCTTTGCCTCAGAAACGCGCAACTTGTGCTGGCGGACAAGTTACCGCCAAC
GCGGCCTGTTGTGTCCTCTTCCCGCTCATGGAAGACCTACAGAAGAACTTGTTCGACGACGGCGCATGCGGCGAAGATGCGCATGAAGCCCTTCGCCTGACGTTCCACGACGCCATTGGA
TTCTCTCCTTCTAGGGGCGTTATGGGAGGTGCCGACGGCTCTGTCATCACATTCTCTGATACTGAGGTTAACTTCCCTGCCAACCTTGGTATCGATGAGATCGTCGAAGCTGAGAAACCG
TTCCTTGCAAGGCACAACATCTCCGCAGGCGATTTGGTTCACTTCGCCGGCACCCTCGCCGTTACCAACTGTCCTGGTGCTCCGCGAATCCCGTTCTTCTTAGGTCGCCCTCCAGCCAAG
GCCGCATCACCCATTGGATTAGTTCCGGAACCATTCGATACCATCACAGATATCCTGGCCCGAATGGATGACGCTGGATTCGTCTCTGTCGAGGTTGTCTGGCTCCTTTCCGCGCACTCT
GTCGCTGCAGCTGATCATGTTGACGAAACTATTCCTGGAACGCCGTTCGACTCAACGCCAAACCTTTTCGATTCACAAATCTTCATCGAGACGCAACTCCGCGGAATTTCCTTCCCAGGC
ACTGGTGGGAATCACGGCGAAGTACAATCCCCACTCAAGGGTGAAATGAGACTCCAGTCAGATCACTTGTTCGCTCGAGACGATAGGACATCCTGCGAATGGCAGTCCATGACTAACGAT
CAACAGAAGATTCAAGACCGCTTCTCCGACACGCTGTTCAAGATGTCGATGCTTGGACAAAACCAGGACGCCATGATCGATTGCTCCGATGTCATCCCCGTCCCCGCTGCCCTTGTAACC
AAACCCCATCTCCCCGCCGGGAAGAGCAAGACCGACGTTGAACAAGCCTGTGCCACTGGCGCCTTCCCTGCTCTCGGTGCTGACCCTGGCCCAGTCACTTCTGTTCCTCGTGTGTAA

Retrieve as FASTA