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Entry information : HsubCIIBB02
Entry ID 10565
Creation 2012-02-28 (Christophe Dunand)
Last sequence changes 2012-02-28 (Christophe Dunand)
Sequence status complete
Reviewer Catherine
Last annotation changes 2019-05-10 (Catherine )
Peroxidase information: HsubCIIBB02
Name HsubCIIBB02
Class Other class II peroxidase type B    [Orthogroup: CIIBB002]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Strophariaceae Hypholoma
Organism Hypholoma sublateritium    [TaxId: 71945 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HsubCIIBB02
start..stop		 S start..stop
HsubCIIBB03 721 0 1..371 1..371
HsubCIIBB10 720 0 1..371 1..371
HsubCIIBB09 680 0 1..371 1..371
HsubCIIBB05 607 0 1..366 1..366
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10565' 'complement(join(47802..47838,47894..47958,48012..48110,48171..48247,48304..48349,48403..48472,48531..48579,48630..48664,48713..48958,49017..49157,49218..49404,49455..49515))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 49455..49515 59 N° 2 49218..49404 185 N° 3 49017..49157 139 N° 4 48713..48958 244
N° 5 48630..48664 33 N° 6 48531..48579 47 N° 7 48403..48472 68 N° 8 48304..48349 44
N° 9 48171..48247 75 N° 10 48012..48110 97 N° 11 47894..47958 63 N° 12 47802..47838 35
complement(join(47802..47838,47894..47958,48012..48110,48171..48247,48304..48349 ,48403..48472,48531..48579,48630..48664,48713..48958,49017..49157,49218..49404,4 9455..49515))


exon

Literature and cross-references HsubCIIBB02
DNA ref. JGI genome:   scaffold_107 (49515..47802)
Cluster/Prediction ref. JGI gene:   47480
Protein sequence: HsubCIIBB02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   370 (349)
PWM (Da):   %s   38410.32 (36208.1) Transmb domain:   %s   i225-244o303-325i358-380o406-428i
PI (pH):   %s   4.25 (4.29) Peptide Signal:   %s   cut: 22 range:22-370
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVFSAALSAFVLALPLLSVNAARTKRALCPDGKNTAVNKACCALFPVVDDIVDNLFTNECGDSAHGALRLVFHDAIGISPTVGGGGADGSIATFNETELTFPANLGIDDVLDDIGPFILK
HANTVSPGDFIQLAGAVSLVQCPGAPRIPFFMGRALPKAASPPNLVPQPTDDITTILERFGSVGFSPAEVVAVVGGSHSVAGADDVVPNFQGIPFDQTPSQFDTQIFVDVLLHGTNFTDG
GGPQSGELETAVAGTVRLQSDGLLARDPRTACTWQSFVNEQSKMAAAFGAGVLKLSFLGQNERELTDCSEVIPAAKAVNFGPATFPPTKSIRDIDLSCDEARFPDLRTQPGPAVTIAPIP
QAVTSSGDDS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (11 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTTTCAGCGCTGCCCTCTCCGCATTTGTGCTCGCACTGCCCCTTCTCTCGGTAAATGGTAAGGGCAACGCTTTCATCTTGGAGGAGTGTTCTCATCATTATTTCCAGCTCTGCCAG
GACCAAGCGCGCTTTGTGCCCCGACGGTAAAAACACCGCAGTCAACAAGGCGTGCTGTGCCCTGTTCCCTGTCGTCGATGACATAGTGGACAACCTTTTCACCAACGAATGTGGTGACTC
GGCCCACGGTGCTCTCCGTCTGGTTTTCCACGACGCCATTGGTATTTCCCCGACGGTCGGGTTCGTCTAATCATAAATCTGGCGTCGCATCAGTAATATGCTAATCCTTAAATACCATAG
CGCGGTGGAGGTGCTGATGGATCCATCGCAACCTTCAACGAGACGGAATTGACCTTCCCTGCCAACCTTGGCATCGACGATGTTCTCGACGACATTGGCCCGTTCATTCTTAAGCACGCC
AACACCGTCTCTCCTGGAGACTTGTAAGTAACAAATTTATTATTTGAACCACAGCTTCCGTTAACAGTGTCTCCATTGCAGCACATCCAGCTCGCTGGAGCCGTGAGTCTGGTCCAGTGC
CCGGGTGCTCCCCGCATTCCGTTCTTCATGGGACGTGCCCTACCCAAGGCCGCATCGCCGCCCAACCTCGTTCCTCAGCCAACTGACGACATCACCACCATCCTTGAGCGCTTCGGTTCA
GTCGGTTTCTCCCCCGCCGAGGTCGTCGCCGTTGTCGGCGGATCTCACAGTGTCGCCGGTGCTGACGACGTTGTTCCGAACTTCCAGGGGTACGCCAGCCCTTATTTTCTATTTCGATCT
TACTGACCTTCTTCAAGAAAATCCCCTTCGATCAAACGCCCTCTCAGTTTGACAGTATGTCTATTTCTGTACTCGCCTCGATATTTTGCTAACATATCGTTTAGCTCTCAGATCTTCGTT
GACGTTCTCCTGCACGGAACCAACTTCACTGACGGGTATGCATTGATATTATTGCTGCGGTCTGGATTTCTACTAAATCTGACATACCTGCAGAGAGGAGGCCCCCAGTCCGGCGAACTC
GAGACTGCTGTTGCCGGCACGGTACGCTTGCAGTCAGACGGACTTGTAAGTTATTCAGATGATATTTCACGATAACTTTGCTGATCACATATGTACAGCTCTCGCCCGTGACCCAAGGAC
CGCCTGCACATGGCAATCTTTCGTCAGTAAGTAGCAACTCCATCTTTTCTAGGACACGAACCTCATATAGCATGTATTACAGACACGAGCAGTCCAAGATGGCCGCGGCCTTCGGAGCCG
GCGTGCTCAAGCTTTCCTTCTTGGGCCAGAATGAGCGCGAGGTAATCAATAAGCTGCATATTTCCAATATCCCAGCGCTAATATCCGCGATGTGCCTTTAGTTTTGACCGACTGCAGTGA
AGTAATCCCTGCGGCCAAGGCCGTCAACTTTGGACCCGCTACTTTCCCACCTACCAAGAGCATCCGCGATATCGACCTCTCTGTGAGCTACACTTTTATACGGTATATACCTGAATTCTC
ACAAGTGTTCGATAGTGTGCGACGAGGCCAGGTTCCCCGACCTCCGCACTCAGCCAGGCCCGGCGGTTACCATCGCTCCCATGTGCGTCGACTCATAATCCCTATTTATGCATTGATTTC
TGACCTGTATCCTTTAGTCTCCCCAAGCTGTTACCAGCAGCGGCGACGACTCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTTTCAGCGCTGCCCTCTCCGCATTTGTGCTCGCACTGCCCCTTCTCTCGGTAAATGCTGCCAGGACCAAGCGCGCTTTGTGCCCCGACGGTAAAAACACCGCAGTCAACAAGGCG
TGCTGTGCCCTGTTCCCTGTCGTCGATGACATAGTGGACAACCTTTTCACCAACGAATGTGGTGACTCGGCCCACGGTGCTCTCCGTCTGGTTTTCCACGACGCCATTGGTATTTCCCCG
ACGGTCGGCGGTGGAGGTGCTGATGGATCCATCGCAACCTTCAACGAGACGGAATTGACCTTCCCTGCCAACCTTGGCATCGACGATGTTCTCGACGACATTGGCCCGTTCATTCTTAAG
CACGCCAACACCGTCTCTCCTGGAGACTTCATCCAGCTCGCTGGAGCCGTGAGTCTGGTCCAGTGCCCGGGTGCTCCCCGCATTCCGTTCTTCATGGGACGTGCCCTACCCAAGGCCGCA
TCGCCGCCCAACCTCGTTCCTCAGCCAACTGACGACATCACCACCATCCTTGAGCGCTTCGGTTCAGTCGGTTTCTCCCCCGCCGAGGTCGTCGCCGTTGTCGGCGGATCTCACAGTGTC
GCCGGTGCTGACGACGTTGTTCCGAACTTCCAGGGAATCCCCTTCGATCAAACGCCCTCTCAGTTTGACACTCAGATCTTCGTTGACGTTCTCCTGCACGGAACCAACTTCACTGACGGA
GGAGGCCCCCAGTCCGGCGAACTCGAGACTGCTGTTGCCGGCACGGTACGCTTGCAGTCAGACGGACTTCTCGCCCGTGACCCAAGGACCGCCTGCACATGGCAATCTTTCGTCAACGAG
CAGTCCAAGATGGCCGCGGCCTTCGGAGCCGGCGTGCTCAAGCTTTCCTTCTTGGGCCAGAATGAGCGCGAGTTGACCGACTGCAGTGAAGTAATCCCTGCGGCCAAGGCCGTCAACTTT
GGACCCGCTACTTTCCCACCTACCAAGAGCATCCGCGATATCGACCTCTCTTGCGACGAGGCCAGGTTCCCCGACCTCCGCACTCAGCCAGGCCCGGCGGTTACCATCGCTCCCATTCCC
CAAGCTGTTACCAGCAGCGGCGACGACTCTTAA

Retrieve as FASTA