View Redoxidase 10643

Entry information : GluxAPx-CcP02

Entry ID	10643
Creation	2012-03-02 (Christophe Dunand)
Last sequence changes	2012-03-02 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-04-03 (Catherine Mathe (Scipio))

Peroxidase information: GluxAPx-CcP02

Name

GluxAPx-CcP02

Class

Hybrid Ascorbate-Cytochrome C peroxidase [Orthogroup: APx-CcP003]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Tricholomataceae Gymnopus

Organism

Gymnopus luxurians [TaxId: 206324 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GluxAPx-CcP02 start..stop	S start..stop
GluxAPx-CcP[P]09	498	3.03e-176	1..327	133..453
GluxAPx-CcP07	480	1.78e-169	1..341	131..463
GluxAPx-CcP05	476	9.84e-169	1..316	60..387
GluxAPx-CcP08	471	8.12e-166	1..332	133..457

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10643' 'join(374551..374831,374893..374958,375074..375251,375309..375680,375735..375863)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	374551..374831	279	N° 2	374893..374958	64	N° 3	375074..375251	176	N° 4	375309..375680	370
N° 5	375735..375863	127
join(374551..374831,374893..374958,375074..375251,375309..375680,375735..375863)

Literature and cross-references GluxAPx-CcP02

DNA ref.	JGI genome: scaffold_46 (374551..375863)
Cluster/Prediction ref.	JGI gene: 247481

Protein sequence: GluxAPx-CcP02

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	341
PWM (Da):	36438.7
PI (pH):	4

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAVAGCGGPFIPFSAGRVDATEAGPPTVPEPQQDLASHTESFHHQGFTPTEMIALIVCGHTLGGVRQVDFPLVVTDSATVLQTFDMTPAFDTAVVPEYLQNTAQNPLVVGPNVTTSLLSP
ANFNQTCSSLFERMLNTIPSNVNLTNPITEPFNYVVADPQFAYRDGSLSMATALRVMNDNPSCTVTLQWTDQQGSFCPPNGCSQQSNGTQNVLFTIIGKMQGVTALRYPFNATINATSSI
SKFWFEVNENDGSELIVIDNGGAGFVIEQDSVFIDVGRSAIFSVESGGIFDEFVNLVVAVQGDGASTSASVTSFIPTLLNTTNPSFTDPFSTLMMRRLPSD*

Retrieve as FASTA

Remarks

Complete sequence from genomic (4 introns). Check prediction!!!

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCGTTGCTGGATGCGGAGGCCCCTTCATTCCTTTCAGTGCTGGTCGTGTTGATGCTACAGAGGCCGGACCACCAACTGTCCCAGAGCCACAACAGGATCTTGCTAGCCACACAGAG
TCATTCCATCATCAGGGATTTACCCCCACTGAAATGATAGCTCTCATTGTGTGTGGACATACTCTGGGTGGAGTCAGACAAGTGGACTTTCCTTTGGTTGTTACAGATAGTGCGACAGTT
TTGCAAACTTTTGATATGACACCTGCCTTTGACACCGCCGTGTGTAAGTGAAATCTTGGCATATCGATAGTTGTCCACCTGATGAAACTTTGCTTTCTTTGTAGTGTCCCTGAATATCTG
CAAAACACCGCCCAAAATCCGCTTGTTGTAGGCCCGAATGTCACAACCAGAGGTCAGGTTTCCATATTTTTTCTAGCAATGGTAATGCCACAATGCAAAGGTATGGCTTGTGCCTCTTCA
AGTAGATTCATCTCCATTAACTGAATTATCTCTTCAATTGGCTCCAGTCTGCTATCTCCGGCCAACTTCAATCAAACATGTTCCAGCCTTTTTGAGCGAATGCTCAACACCATCCCCAGT
AATGTGAATCTTACCAACCCTATCACAGAACCATTCAACTATGTTGTTGCTGACCCTCAGTTTGCCTACCGGGATGGGTCATTGTCCATGGCCACTGCTCTACGCGCGTGCGTGTCATCA
AGGTTATGATCAGTTTGCTCTAAGTTGAGTAACTGTATTGATAGGTTATGAATGACAATCCAAGCTGCACGGTGACTCTGCAGTGGACTGATCAACAGGGATCATTTTGCCCCCCTAATG
GTTGCTCGCAGCAGTCAAACGGTACACAAAATGTATTATTCACCATAATTGGCAAAATGCAAGGCGTTACTGCACTAAGATACCCATTCAATGCAACTATTAATGCGACTTCTTCCATCT
CAAAGTTCTGGTTTGAGGTCAATGAGAATGATGGATCCGAGCTGATTGTTATTGACAATGGAGGCGCTGGATTTGTGATTGAACAAGATTCTGTATTTATTGATGTTGGTCGAAGTGCAA
TTTTTTCAGTAGAATCAGGGGGGATATTTGATGAATTTGTGAACCTTGTTGTGGCGCGGTATGTGTGCCCTTTTGATATCCTATTTCCCATGAGTGCTTAGAATGCGCATAGGTCCAGGG
TGATGGTGCTTCAACTAGCGCATCAGTAACTTCATTCATTCCCACCCTCTTGAACACTACTAATCCTTCGTTCACAGACCCCTTCTCAACCTTGATGATGCGCAGGCTTCCAAGTGATTG
A

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCGTTGCTGGATGCGGAGGCCCCTTCATTCCTTTCAGTGCTGGTCGTGTTGATGCTACAGAGGCCGGACCACCAACTGTCCCAGAGCCACAACAGGATCTTGCTAGCCACACAGAG
TCATTCCATCATCAGGGATTTACCCCCACTGAAATGATAGCTCTCATTGTGTGTGGACATACTCTGGGTGGAGTCAGACAAGTGGACTTTCCTTTGGTTGTTACAGATAGTGCGACAGTT
TTGCAAACTTTTGATATGACACCTGCCTTTGACACCGCCGTTGTCCCTGAATATCTGCAAAACACCGCCCAAAATCCGCTTGTTGTAGGCCCGAATGTCACAACCAGTCTGCTATCTCCG
GCCAACTTCAATCAAACATGTTCCAGCCTTTTTGAGCGAATGCTCAACACCATCCCCAGTAATGTGAATCTTACCAACCCTATCACAGAACCATTCAACTATGTTGTTGCTGACCCTCAG
TTTGCCTACCGGGATGGGTCATTGTCCATGGCCACTGCTCTACGCGTTATGAATGACAATCCAAGCTGCACGGTGACTCTGCAGTGGACTGATCAACAGGGATCATTTTGCCCCCCTAAT
GGTTGCTCGCAGCAGTCAAACGGTACACAAAATGTATTATTCACCATAATTGGCAAAATGCAAGGCGTTACTGCACTAAGATACCCATTCAATGCAACTATTAATGCGACTTCTTCCATC
TCAAAGTTCTGGTTTGAGGTCAATGAGAATGATGGATCCGAGCTGATTGTTATTGACAATGGAGGCGCTGGATTTGTGATTGAACAAGATTCTGTATTTATTGATGTTGGTCGAAGTGCA
ATTTTTTCAGTAGAATCAGGGGGGATATTTGATGAATTTGTGAACCTTGTTGTGGCGGTCCAGGGTGATGGTGCTTCAACTAGCGCATCAGTAACTTCATTCATTCCCACCCTCTTGAAC
ACTACTAATCCTTCGTTCACAGACCCCTTCTCAACCTTGATGATGCGCAGGCTTCCAAGTGATTGA

Retrieve as FASTA