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Entry information : GluxAPx-CcP03
Entry ID 10645
Creation 2012-03-02 (Christophe Dunand)
Last sequence changes 2012-03-02 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-03 (Catherine Mathe (Scipio))
Peroxidase information: GluxAPx-CcP03
Name GluxAPx-CcP03
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP003]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Tricholomataceae Gymnopus
Organism Gymnopus luxurians    [TaxId: 206324 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GluxAPx-CcP03
start..stop		 S start..stop
GluxAPx-CcP08 571 0 17..461 12..428
GluxAPx-CcP07 553 0 18..454 11..422
GluxAPx-CcP06 546 0 19..459 14..426
GluxAPx-CcP[P]09 533 0 12..461 7..428
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10645' 'complement(join(1018830..1019240,1019292..1019469,1019522..1019635,1019694..1020003,1020071..1020143,1020206..1020292,1020354..1020578))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1020354..1020578 223 N° 2 1020206..1020292 85 N° 3 1020071..1020143 71 N° 4 1019694..1020003 308
N° 5 1019522..1019635 112 N° 6 1019292..1019469 176 N° 7 1018830..1019240 409  
complement(join(1018830..1019240,1019292..1019469,1019522..1019635,1019694..1020 003,1020071..1020143,1020206..1020292,1020354..1020578))


exon

Literature and cross-references GluxAPx-CcP03
DNA ref. JGI genome:   scaffold_10 (1020578..1018830)
Cluster/Prediction ref. JGI gene:   39276
Protein sequence: GluxAPx-CcP03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   465 (274)
PWM (Da):   %s   50679.35 (29439.6) Transmb domain:   %s   i13-35o
PI (pH):   %s   4.8 (5.03) Peptide Signal:   %s   cut: 0 range:Ymax-273
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MARPAPNLHCLPFQIIIVIACIFAGFVNGFATFQWPNTLLSYADFQLYEAARFSSLAEECAPRQSTTVAAQWLRIAYHDMSTHNKFDGTGGLDASIQFELERTQNVGIGMAQSLADFATL
LVTTPFFGTADLIALGAVFGVASCGGPIIPYRAGRVDATRAGPPTVPLPQQDLASHIESFRRQGFSQTEMIALVACGHTLGGVRQVDFPTIVTNPTTIMANFDTTPTFDNTVVSQYLQNT
TQNVLVVGPNITTRSDFRIFSSDGNATMQSLLSPTTFDDTCANLIERLINTVPNGVTLSEPIAEPFDYLVTNPLFSYRSGLFSMTTALRVLNLSNNPRRTVTMFWLDRQGSSCPPVGCSV
RSSSNQTNILNSFGHLISSVTSSNRFFFNATINATTSISKFWFEISENDGSEPVLVDNNGPGYVIEQDEVFVDVQRSEIVTVIQPQSLPSFFTFKKLVLAVSTSA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCACGTCCTGCGCCGAATCTTCACTGCTTGCCATTCCAAATAATCATAGTGATAGCCTGTATTTTTGCTGGCTTCGTAAACGGTTTTGCCACATTCCAATGGCCCAACACGTTGCTG
AGCTATGCAGATTTTCAGCTTTACGAGGCCGCTAGATTCAGCTCCTTAGCAGAAGAATGCGCGCCAAGGCAAAGTACCACTGTAGCCGCACAATGGCTTCGTATTGTGAGCTTTCGACCC
AATGAATGAATGAGCACGTACGCTAAACCGTTGCAAATCGACGTAGGCGCTTACCATGACATGTCGACTCACAACAAATTCGACGGCACCGGTGGACTCGATGCTTCCATCCAGTTCGAA
CTGGAAAGGACTCAGGTATGAGATTGTCATAGCAGCCCTGCTTATATTGCGGCTGACACCTTATCGACTTGGAACAGAAAATGTCGGGATCGGAATGGCTCAGTCTTTGGCTGACTTTGC
CACCCTTCTGGTAACCACTCCGTTTTTTGGAAGTACGTTCACAGAGTTTCCCATGAAACTGGTAGCTAATGCCTCGCGTGGATTCGCTGCTATGTATAGCGCGGCAGACCTGATCGCTTT
AGGCGCAGTGTTCGGCGTAGCATCATGTGGAGGTCCAATAATCCCCTATCGCGCTGGTCGGGTCGATGCTACCAGAGCTGGCCCGCCTACCGTCCCGCTACCACAACAGGATCTTGCATC
ACATATTGAGTCCTTCCGCCGTCAAGGATTCAGTCAAACTGAGATGATAGCGCTGGTTGCATGCGGGCATACCCTCGGTGGAGTCAGACAAGTAGATTTTCCAACAATAGTAACAAATCC
TACCACGATTATGGCCAACTTCGACACCACACCGACTTTTGATAACACAGTGTACGAGAGGTCCATTTCTTGAGCTTTCCTCCTTCTTATGGCAAGACTTTTTGATCAGGGGGTTTCGCA
ATATCTCCAAAACACCACCCAAAATGTCCTCGTCGTGGGCCCCAATATAACGACAAGATCGGATTTCCGAATCTTTTCAAGTGATGGCAATGCAACTATGCAAAGGTGCTCTTTCATCCA
TTGGACAGAATATATTTTTCCTTAATGTATACGACAGTCTCTACTATCACCCACGACGTTCGACGACACATGCGCAAACCTGATCGAAAGGCTGATCAATACCGTTCCAAACGGCGTAAC
TCTTTCTGAGCCCATAGCTGAACCGTTCGACTACCTCGTCACCAATCCTTTATTCTCTTATCGGAGTGGTTTGTTCAGTATGACGACCGCTCTCCGAGTAAGTAGGATCCCTTTCCCAAT
ATGATCAGTACAGAGCTTCGCATCGTAGGTGTTCTCAATCTCAGCAATAATCCACGTCGAACAGTGACCATGTTCTGGCTTGATCGACAAGGTTCTTCCTGTCCACCCGTTGGATGCTCC
GTTCGGTCTTCAAGCAACCAAACCAACATTCTAAATAGCTTCGGACACCTTATTTCTAGTGTCACTTCCTCCAACAGGTTTTTCTTCAATGCGACTATCAATGCGACTACGTCTATCTCC
AAATTCTGGTTCGAAATTAGCGAAAATGACGGATCTGAACCAGTATTAGTAGACAACAACGGCCCGGGATATGTAATTGAACAAGATGAAGTGTTTGTGGACGTCCAACGAAGCGAAATT
GTCACTGTCATTCAACCTCAAAGTTTACCAAGTTTCTTCACGTTCAAAAAGCTCGTATTGGCCGTGAGTACTTCTGCGTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCACGTCCTGCGCCGAATCTTCACTGCTTGCCATTCCAAATAATCATAGTGATAGCCTGTATTTTTGCTGGCTTCGTAAACGGTTTTGCCACATTCCAATGGCCCAACACGTTGCTG
AGCTATGCAGATTTTCAGCTTTACGAGGCCGCTAGATTCAGCTCCTTAGCAGAAGAATGCGCGCCAAGGCAAAGTACCACTGTAGCCGCACAATGGCTTCGTATTGCTTACCATGACATG
TCGACTCACAACAAATTCGACGGCACCGGTGGACTCGATGCTTCCATCCAGTTCGAACTGGAAAGGACTCAGAATGTCGGGATCGGAATGGCTCAGTCTTTGGCTGACTTTGCCACCCTT
CTGGTAACCACTCCGTTTTTTGGAACGGCAGACCTGATCGCTTTAGGCGCAGTGTTCGGCGTAGCATCATGTGGAGGTCCAATAATCCCCTATCGCGCTGGTCGGGTCGATGCTACCAGA
GCTGGCCCGCCTACCGTCCCGCTACCACAACAGGATCTTGCATCACATATTGAGTCCTTCCGCCGTCAAGGATTCAGTCAAACTGAGATGATAGCGCTGGTTGCATGCGGGCATACCCTC
GGTGGAGTCAGACAAGTAGATTTTCCAACAATAGTAACAAATCCTACCACGATTATGGCCAACTTCGACACCACACCGACTTTTGATAACACAGTGGTTTCGCAATATCTCCAAAACACC
ACCCAAAATGTCCTCGTCGTGGGCCCCAATATAACGACAAGATCGGATTTCCGAATCTTTTCAAGTGATGGCAATGCAACTATGCAAAGTCTACTATCACCCACGACGTTCGACGACACA
TGCGCAAACCTGATCGAAAGGCTGATCAATACCGTTCCAAACGGCGTAACTCTTTCTGAGCCCATAGCTGAACCGTTCGACTACCTCGTCACCAATCCTTTATTCTCTTATCGGAGTGGT
TTGTTCAGTATGACGACCGCTCTCCGAGTTCTCAATCTCAGCAATAATCCACGTCGAACAGTGACCATGTTCTGGCTTGATCGACAAGGTTCTTCCTGTCCACCCGTTGGATGCTCCGTT
CGGTCTTCAAGCAACCAAACCAACATTCTAAATAGCTTCGGACACCTTATTTCTAGTGTCACTTCCTCCAACAGGTTTTTCTTCAATGCGACTATCAATGCGACTACGTCTATCTCCAAA
TTCTGGTTCGAAATTAGCGAAAATGACGGATCTGAACCAGTATTAGTAGACAACAACGGCCCGGGATATGTAATTGAACAAGATGAAGTGTTTGTGGACGTCCAACGAAGCGAAATTGTC
ACTGTCATTCAACCTCAAAGTTTACCAAGTTTCTTCACGTTCAAAAAGCTCGTATTGGCCGTGAGTACTTCTGCGTAG

Retrieve as FASTA