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Entry information : GluxAPx-CcP04
Entry ID 10646
Creation 2012-03-02 (Christophe Dunand)
Last sequence changes 2012-03-02 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-03 (Catherine Mathe (Scipio))
Peroxidase information: GluxAPx-CcP04
Name GluxAPx-CcP04
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Tricholomataceae Gymnopus
Organism Gymnopus luxurians    [TaxId: 206324 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GluxAPx-CcP04
start..stop		 S start..stop
ShirAPx-CcP 425 3.09e-147 9..354 9..348
HanAPx-CcP04 414 8.57e-143 27..340 28..338
AmacrAPx-CcP01 411 8.56e-142 1..357 1..352
MvarAPx-CcP03 402 1.37e-138 4..358 5..352
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10646' 'join(550717..550957,551026..551172,551234..551427,551478..551538,551604..551685,551744..551781,551843..551924,551992..552226)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 550717..550957 239 N° 2 551026..551172 145 N° 3 551234..551427 192 N° 4 551478..551538 59
N° 5 551604..551685 80 N° 6 551744..551781 36 N° 7 551843..551924 80 N° 8 551992..552226 233
join(550717..550957,551026..551172,551234..551427,551478..551538,551604..551685, 551744..551781,551843..551924,551992..552226)


exon

Literature and cross-references GluxAPx-CcP04
DNA ref. JGI genome:   scaffold_4 (550717..552226)
Cluster/Prediction ref. JGI gene:   153711
Protein sequence: GluxAPx-CcP04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   359 (337)
PWM (Da):   %s   38532.96 (36304.7) Transmb domain:   %s   i7-26o
PI (pH):   %s   4.32 (4.35) Peptide Signal:   %s   cut: 23 range:23-359
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLTDTAIALVVTLLVTATSSLGAYVWPDHLYDELEHLLVDQEGFNRGAYFRRAITPCTNYVNGDQTLGRMTAAQWLRTAFHDYATANISDGTGGTDASIGWETERPENVGSAFNDSMSFF
APFVNQYVSMADMIALSVVTSVGVCSSPSIHIPFRGGRIDASEGGTFGVPEPETDIGTTLKQFAQTGFNQQDAIGLTACGHTLGNVHHGGFPQVVGPEAVTPNNTGGGVHFDSTVDVFDV
LVVNEYLEGIGQRGGPLVTTDNVTVRSDLRIYASDSNATMRELSTSPDHFISRCVALFSRMLDTVPSTTTLSDVITPLEVKPVNVTLDLVDDEDGVRIIFAGYIRVRCQPSIWPPAVPG*

Retrieve as FASTA  
Remarks Complete sequence from genomic (7 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTGACTGACACTGCTATTGCTCTGGTCGTAACTCTCCTTGTAACAGCAACTTCCAGCTTAGGTGCATACGTGTGGCCCGACCATCTCTACGACGAGCTAGAGCACCTCCTCGTAGAT
CAGGAAGGGTTCAACCGTGGCGCGTATTTCAGACGCGCCATTACACCATGCACCAATTATGTGAATGGGGATCAGACATTGGGACGGATGACGGCTGCACAATGGTTACGGACGGCTTTT
CTCGTGAGCCCCATTCTCTTCCTCCGTGTAGTCAATCGTCCGTTTACTCGGTGGTTATGGTTCGTACACAGATGACTATGCTACAGCCAACATTAGCGACGGCACGGGCGGAACGGATGC
TTCAATTGGCTGGGAAACTGAAAGACCGGAGAATGTGGGATCTGCTTTTAACGATTCAATGAGCTTTTTTGCTCCGTTTGTGAACCAATATGTTTCTATAGTAAGTTCTCTATCATTGCG
GTCAAAATGAATACTCCCTGACAATCCTTTGAATCTTTGAGTGGCTGACATGATCGCCTTGAGTGTCGTCACTTCTGTCGGGGTATGTTCTTCTCCGAGCATACACATACCTTTTCGTGG
AGGGCGCATCGACGCAAGCGAAGGAGGAACTTTTGGCGTTCCGGAACCGGAGACGGATATCGGGACTACTCTGAAGCAGTTTGCGCAAACAGGGTTCAACCAGCAGGATGCTATTTTGTA
TAAATTTTTGCGCTTGCTTTAGAAATTTGCTAAGATACGTTTTGCAGGGTCTAACGGCGTGCGGCCATACTCTTGGGAACGTGCACCATGGTGGGTTTCCTCAAGTCGCGGTGAGCATCC
GTATTCGCTGCATACTAAAGTTTTCTCCCTGATTGCAACCTTTTTTTCGGTTCAGTCGGACCAGAAGCTGTAACACCTAACAATACTGGCGGAGGTGTTCATTTCGATTCCACGGTCGAT
GTTTTCGACGTTCTCGTGTGTATGTGTCTGTTCTATGCTCGCCCATTATTATTCACGTAGTATTTTCTCCTTCACAGTGTCAATGAATATTTGGAAGGTATTGGACAACGAGGAGAGGTA
CAATCCGCAATTACTTCGGATGTATAACACTCACTTACGAGCCGTGGCTCTTTTGCAGGTCCCTTGGTGACTACTGACAACGTCACCGTTCGTTCTGACCTTCGCATCTATGCATCGGAT
AGCAATGCGACTATGAGAGAGAGTAGGTCAATTATAGACACCCGTGATACCAGACTAATGCATTTGCTTTTACCTCGTTTCCTGAGCAGGTTATCAACTTCACCAGACCACTTTATCTCC
AGATGCGTCGCTCTATTCTCTCGAATGCTCGACACCGTACCTAGCACGACCACTCTGTCGGACGTCATCACACCGTTAGAGGTCAAACCTGTGAATGTTACTTTGGACCTCGTAGACGAT
GAAGATGGAGTCCGAATCATATTTGCTGGTTATATCCGGGTAAGATGCCAGCCCTCTATCTGGCCTCCTGCTGTGCCTGGTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTGACTGACACTGCTATTGCTCTGGTCGTAACTCTCCTTGTAACAGCAACTTCCAGCTTAGGTGCATACGTGTGGCCCGACCATCTCTACGACGAGCTAGAGCACCTCCTCGTAGAT
CAGGAAGGGTTCAACCGTGGCGCGTATTTCAGACGCGCCATTACACCATGCACCAATTATGTGAATGGGGATCAGACATTGGGACGGATGACGGCTGCACAATGGTTACGGACGGCTTTT
CATGACTATGCTACAGCCAACATTAGCGACGGCACGGGCGGAACGGATGCTTCAATTGGCTGGGAAACTGAAAGACCGGAGAATGTGGGATCTGCTTTTAACGATTCAATGAGCTTTTTT
GCTCCGTTTGTGAACCAATATGTTTCTATGGCTGACATGATCGCCTTGAGTGTCGTCACTTCTGTCGGGGTATGTTCTTCTCCGAGCATACACATACCTTTTCGTGGAGGGCGCATCGAC
GCAAGCGAAGGAGGAACTTTTGGCGTTCCGGAACCGGAGACGGATATCGGGACTACTCTGAAGCAGTTTGCGCAAACAGGGTTCAACCAGCAGGATGCTATTGGTCTAACGGCGTGCGGC
CATACTCTTGGGAACGTGCACCATGGTGGGTTTCCTCAAGTCGTCGGACCAGAAGCTGTAACACCTAACAATACTGGCGGAGGTGTTCATTTCGATTCCACGGTCGATGTTTTCGACGTT
CTCGTTGTCAATGAATATTTGGAAGGTATTGGACAACGAGGAGGTCCCTTGGTGACTACTGACAACGTCACCGTTCGTTCTGACCTTCGCATCTATGCATCGGATAGCAATGCGACTATG
AGAGAGTTATCAACTTCACCAGACCACTTTATCTCCAGATGCGTCGCTCTATTCTCTCGAATGCTCGACACCGTACCTAGCACGACCACTCTGTCGGACGTCATCACACCGTTAGAGGTC
AAACCTGTGAATGTTACTTTGGACCTCGTAGACGATGAAGATGGAGTCCGAATCATATTTGCTGGTTATATCCGGGTAAGATGCCAGCCCTCTATCTGGCCTCCTGCTGTGCCTGGTTGA

Retrieve as FASTA