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Entry information : OsPrx56(LOC_Os04g53640)
Entry ID 1066
Creation 2006-07-25 (Filippo Passardi)
Last sequence changes 2006-07-25 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2022-02-10 (Christophe Dunand)
Peroxidase information: OsPrx56(LOC_Os04g53640)
Name OsPrx56(LOC_Os04g53640)
Class Class III peroxidase    [Orthogroup: Prx017]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue type N/D
Inducer Acid treatment
Repressor N/D
Best BLASTp hits
Perox score E-value OsPrx56
start..stop		 S start..stop
BdiPrx132 598 0 1..328 1..328
TaPrx182-1B 573 0 1..328 1..331
TaPrx182-1A 568 0 1..328 1..331
SiPrx50 547 0 1..328 1..347
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1066' 'join(32004823..32005038,32005127..32005315,32005538..32005706,32006328..32006740)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 32004823..32005038 214 N° 2 32005127..32005315 187 N° 3 32005538..32005706 167 N° 4 32006328..32006740 411
join(32004823..32005038,32005127..32005315,32005538..32005706,32006328..32006740 )


exon

Literature and cross-references OsPrx56(LOC_Os04g53640)
Literature Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
Protein ref. UniProtKB:   Q5U1N7
DNA ref. GenBank:   NC_008397.1 (32004823..32006737)
Protein sequence: OsPrx56(LOC_Os04g53640)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (306)
PWM (Da):   %s   36125.29 (33601.9)  
PI (pH):   %s   8.38 (8.20) Peptide Signal:   %s   cut: 23 range:23-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPYRLLFGFVLSLVLQFSLVLSNPPGLNIGFYQYTCPKAEVIVRD
EMTKIISRVPSLAGPLLRMHFHDCFVNGCDGSILLDSTPGSPSEKESIPNLSLRGFGTIDRVKAKLEQACPGVVSCADILALVARDVVFLTKGPHWEVPTGRRDGTRSVKDDAVNNLPPPFFDATRNLYQFFIPKGLDAKDQVVLLG
GHTLGTSHCSSFASRLYNFSGMMMADPTLDKYYVPRLKSKCQPGDKTTLVEMDPGSFRTFDTSYYRHIARGRALFTSDETLMLDPFTRGYILRQAGVAGYPAEFFADFAASMVKMGNMQV
LTGAQGEIRKHCAFVN

Retrieve as FASTA  
Remarks chromosome 4. No ESTs. TC284038
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTACAGACTCCTCTTCGGATTTGTCCTTTCTCTTGTCCTACAGTTCTCCTTAGTATTATCCAATCCACCAGGGCTAAACATTGGCTTTTACCAATACACATGTCCAAAAGCAGAG
GTCATTGTTCGTGATGAGATGACCAAGATCATATCCCGAGTTCCAAGTCTCGCAGGCCCTCTACTTCGCATGCATTTCCATGATTGTTTTGTGAATATGTATGCATACTGCTTACCATGC
TCTGAGCTGTTTTGATTTTGAATTGAGTTTATCCTACTAAGCTATGTGCCTCTATGTGTTTTGCAGGGTTGCGATGGCTCTATACTTCTGGATAGCACACCAGGATCACCATCTGAGAAG
GAATCAATACCAAACCTCAGTCTGCGAGGTTTTGGCACAATAGACCGTGTCAAAGCTAAGCTGGAGCAAGCCTGCCCTGGAGTTGTGTCCTGTGCTGATATCCTTGCTCTGGTAGCCAGA
GATGTTGTCTTCTTGTGGTAAGAACTAGCTTCCATGTTCATTAATCTTAGTTCATTCTTTAGTTAGAAAAGTTAGTATAGTTTGGCTAAGTGGTGAGAATTGGCTGTTTTAGGCCGACAA
TAGTGGAAAACCACACAGTTTGATTTTCACCATATTCTACGTGGCTATTGGATTTCTTGCTGCTTACAGTAACTAGAACTATAGTTGAGAAAAGTCCCTATTCTTCCCTTGTGCAACAGA
CCAAAGGGCCTCACTGGGAAGTTCCAACTGGGCGGAGGGATGGGACAAGATCAGTGAAGGATGATGCTGTGAACAACCTCCCTCCCCCCTTCTTCGATGCCACGCGGAACTTGTATCAAT
TCTTCATCCCAAAGGGCCTTGACGCAAAGGATCAGGTGGTTCTGCTAGAGGTATATACTATTCTTCACTAACTTCAATGTTTAATCTTCATAGACTAGCTCCCTAGATGATTTATACTGT
ACTTACTGAAAGTTGCAACTCTCGGTTCTGTTGCCTGTGCTCCTTTTAAACACTCTGCTGATCCCGATATATCCCAGTAGCATTCTCCAATAAAGGTGATCACTTATTTAATTACTATAC
AACTTGTTAATAAAGGAAGGTATCATATGCGCATACCAAGTCAACAAAATGGGAAGTACAAAACTATGTGGTTCTTAGTTCTAATCACATGGCACAGTACAGAACCAAGCCAGGAGACCA
AGACCACTTTATCCTCAAACACAGCATAGCTCTTTATTCGAGTGGTCAAAACATCGTTTCCTGTTCAGCACCATACTCATTTGTGCACTTGCAAAATTCATGGTTTTAAATAGCGGGTTA
AGATATTTAGCGATTGACCTTCTCAAACAGCTATAGCGAACTTAATGGAGCTATAGTGGCTAAGACTCTTCTCAAACAGCTATAGCCAGAGATTCAAAACCATGGCAAAATTGCAATCCA
AACTTGTTTAATTACCAAGAACTCATCACAAATGTGCATATGCAATTTGAGAAGTGACACATTGTTCACAGGTGGGCACACTCTTGGAACCTCCCATTGTTCATCCTTCGCCAGCCGGCT
GTACAACTTCAGCGGCATGATGATGGCCGACCCGACGCTGGACAAGTACTACGTGCCGAGGCTGAAGAGCAAGTGCCAGCCCGGCGACAAGACGACGCTGGTGGAGATGGACCCGGGGAG
CTTCAGGACGTTCGACACCAGCTACTACAGGCACATCGCCAGGGGCAGGGCGCTCTTCACCTCCGACGAGACGCTCATGCTCGACCCTTTCACCAGGGGCTACATCCTCCGCCAGGCCGG
CGTCGCCGGCTACCCGGCGGAGTTCTTCGCCGACTTCGCGGCGTCCATGGTGAAGATGGGGAACATGCAGGTGCTCACCGGCGCCCAGGGGGAGATCAGGAAGCACTGTGCCTTTGTGAA
TTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTACAGACTCCTCTTCGGATTTGTCCTTTCTCTTGTCCTACAGTTCTCCTTAGTATTATCCAATCCACCAGGGCTAAACATTGGCTTTTACCAATACACATGTCCAAAAGCAGAG
GTCATTGTTCGTGATGAGATGACCAAGATCATATCCCGAGTTCCAAGTCTCGCAGGCCCTCTACTTCGCATGCATTTCCATGATTGTTTTGTGAATGGTTGCGATGGCTCTATACTTCTG
GATAGCACACCAGGATCACCATCTGAGAAGGAATCAATACCAAACCTCAGTCTGCGAGGTTTTGGCACAATAGACCGTGTCAAAGCTAAGCTGGAGCAAGCCTGCCCTGGAGTTGTGTCC
TGTGCTGATATCCTTGCTCTGGTAGCCAGAGATGTTGTCTTCTTGACCAAAGGGCCTCACTGGGAAGTTCCAACTGGGCGGAGGGATGGGACAAGATCAGTGAAGGATGATGCTGTGAAC
AACCTCCCTCCCCCCTTCTTCGATGCCACGCGGAACTTGTATCAATTCTTCATCCCAAAGGGCCTTGACGCAAAGGATCAGGTGGTTCTGCTAGGTGGGCACACTCTTGGAACCTCCCAT
TGTTCATCCTTCGCCAGCCGGCTGTACAACTTCAGCGGCATGATGATGGCCGACCCGACGCTGGACAAGTACTACGTGCCGAGGCTGAAGAGCAAGTGCCAGCCCGGCGACAAGACGACG
CTGGTGGAGATGGACCCGGGGAGCTTCAGGACGTTCGACACCAGCTACTACAGGCACATCGCCAGGGGCAGGGCGCTCTTCACCTCCGACGAGACGCTCATGCTCGACCCTTTCACCAGG
GGCTACATCCTCCGCCAGGCCGGCGTCGCCGGCTACCCGGCGGAGTTCTTCGCCGACTTCGCGGCGTCCATGGTGAAGATGGGGAACATGCAGGTGCTCACCGGCGCCCAGGGGGAGATC
AGGAAGCACTGTGCCTTTGTGAATTAG

Retrieve as FASTA