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Entry information : MlpLDS03
Entry ID 10663
Creation 2012-03-02 (Christophe Dunand)
Last sequence changes 2012-03-02 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-20 (Catherine Mathe (Scipio))
Peroxidase information: MlpLDS03
Name MlpLDS03
Class Linoleate diol synthase (PGHS like)    [Orthogroup: LDS001]
Taxonomy Eukaryota Fungi Basidiomycota Melampsoraceae Melampsora
Organism Melampsora laricis-populina    [TaxId: 203908 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MlpLDS03
start..stop		 S start..stop
MlpLDS01 1320 0 5..1083 2..1158
MlpLDS02 937 0 10..745 2..825
ScomLDS02 385 1.22e-116 110..668 70..619
GluxLDS02 377 8.78e-114 77..683 36..625
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 471111..471290 178 N° 2 470715..471041 325 N° 3 470355..470640 284 N° 4 469970..470260 289
N° 5 469723..469895 171 N° 6 469261..469303 41 N° 7 469091..469194 102 N° 8 468802..469016 213
N° 9 468628..468724 95 N° 10 468408..468552 143 N° 11 468299..468330 30 N° 12 468122..468231 108
N° 13 467693..467903 209 N° 14 467428..467618 189 N° 15 467112..467232 119 N° 16 466557..467027 469
N° 17 466420..466492 71 N° 18 466147..466328 180  
complement(join(466147..466328,466420..466492,466557..467027,467112..467232,4674 28..467618,467693..467903,468122..468231,468299..468330,468408..468552,468628..4 68724,468802..469016,469091..469194,469261..469303,469723..469895,469970..470260 ,470355..470640,470715..471041,471111..471290))


exon

Literature and cross-references MlpLDS03
DNA ref. JGI genome:   scaffold_20 (471290..466147)
EST ref. GenBank:   GR767567.1 [5' end]  GR767568.1 [3' end]
Protein sequence: MlpLDS03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1083 (271)
PWM (Da):   %s   120595.1 (30452.5)  
PI (pH):   %s   6.84 (6.25) Peptide Signal:   %s   cut: 21 range:21-291
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSQQTTANRPYHSQQSSQPKAGEALVQTRGYTHLLQIGSATDLPTSSDSGLWRRVAQFQETAGIVSHYLFSKGGQYGHLDNYEESATTDNKKSTSLAYLAVQQTLAGLVPENLAMVANLL
TSVGKPLDDRKLQLEEVVAFLSRAGKRRHNAPNKYVDAAQNQFITLLWNDLSHPPTVDLNPKHRFRKADGSDNNLTGDPLLGAANQPYSRSVRPVHPVPTHIAEPEDMFDAILRRPTGYE
GFTPHPARISSLFFGFANIVIHDIFWTNNREEVKVPNKYHESDQNTEQADDKPKKPSPWQNLTSSYASLDPLYGVSDKEQASIRDKEQLGRGLLYNDTFASDRLLMMPPASCALLVLFSR
NHNRIAKKLLELNERGSWKSDLSKLSEEELKQQDDEIFGTARHVNCGYYAGIILGDYLQQWLESTFEKALPSRKWDEMNMSTLMDAIKILKTKLNAADENAHNPKVWKLSKREVRIPVEG
PPVVESEGVYERDSQSSKFRDEDLARILKDSTYEVAGAFGARHVPAVMRWIECQGMRTARDVWKLCTLNEFRAFIGLKEFQTFQEWNSDPEIASAMEDLVGHPANIPLHVGLHGEEAKKP
RLGSGVCLPYTISRAILSDAIALVRGDRFYTDNATADVMTNWGLADCQPDPQNGAPGGMLEKLIRENLHQKALNYAIDPPVQPIIGYKQIQSGERTLVYELSGMHGIQVISRLIADTILS
SKDTPRVEAQRMGMIVGLDHMNSNIKLVYKAVEKVMYHQDVKQYHDFIHSRIQECSTRRSPVSSDETVDVLRDVTNPLVSGCYCYLTESPQRSFKARAAARIAASGLTWQIKSHIQGCAP
SHSVGDTFKKGASMAMMGALGALEETVKFVSGQDPGFKGGHGDTLAFYKTLTAENNAQVDPLSPDELAADCLRAISTLAFTIVNGTANALDYLLPEVTKPDEVPRIRETLETIIKGNNEP
GLHEAFSRHALEATRLGHWNESLRGMVFKSEYQNRNSRSLPIGIIDSDFRLDRDTSSYLRLLDVEGYCLSVFENIVPIVISQVLSLPQVRRAPGGQGKLEKLKIAGSNSGIPTMHIRYDG
TKS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (17 introns) and 3 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCACAACAAACCACTGCCAACAGACCTTATCACTCTCAACAGTCTTCCCAGCCTAAAGCTGGTGAAGCTTTAGTTCAGACTAGAGGATATACTCATCTATTACAGATTGGTTCAGCT
ACTGATTTACCTACTTCAAGCGATTCTGGATTATGGCGTAGAGTTGCTCAATTCCAAGAGGTACGTTCTTGTGATCAATTGAGTTTTAGTTTTCTAGAGGATGATTCTGACATCCTTTGA
ATTTTTCAGACACCGCTGGAATTGTCTCGCATTACCTGTTCTCCAAGGGTGGTCAATACGGTCATTTGGATAACTATGAAGAATCAGCTACCACTGATAATAAAAAATCAACTTCATTGG
CTTACCTCGCTGTTCAACAAACCTTGGCGGGTTTGGTACCAGAGAACCTTGCTATGGTCGCGAACTTATTGACTAGCGTTGGAAAACCATTGGATGACCGAAAACTTCAACTTGAAGAAG
TCGTCGCTTTTCTCTCTCGTGCTGGAAAGAGAAGACATAACGCTCCTAATAAATATGTTGATGCGGCTCAGAATCAATTTATCACTTTGCTTTGGAATGTGAGTGTTTCTGAACTTTGTC
CTTTTTTAAATGTATTGAAACCCAATATTTGCCTCGCATGAAAAATAAACAGGAGATCTCTCTCATCCTCCAACAGTGGATTTGAATCCCAAGCATCGCTTCAGGAAAGCTGATGGAAGT
GACAACAACCTGACTGGTGATCCGCTCCTTGGAGCTGCCAATCAACCGTATTCCAGATCTGTTCGACCGGTTCATCCTGTTCCGACTCACATAGCTGAGCCCGAAGACATGTTCGATGCT
ATTCTACGTCGTCCTACGGGGTACGAAGGTTTTACCCCTCACCCAGCTCGCATTTCCAGTTTATTCTTTGGTTTTGCGAATATCGTCATTCACGACATATGTCAGTTCATTTCTTTTGTG
ATTGATCTTGGTCTACGAGGAATTTTGGAAATATAAGCTGACATATGATTGTTCATGGTTGCCATTGCCATCAGTCTCTGGACCAACAATCGCGAAGAAGTCAAAGTCCCGAACAAATAT
CACGAATCGGATCAGAACACAGAACAAGCCGACGACAAACCCAAGAAGCCCAGCCCGTGGCAGAATTTGACGTCATCTTATGCTTCTTTGGATCCTTTATATGGCGTCAGCGATAAGGAA
CAAGCAAGTATACGCGACAAAGAACAGCTTGGTCGTGGCTTGTTGTATAACGATACCTTTGCCTCGGATCGATTGCTCATGATGCCGCCAGCTTCATGTGCTTTGCTTGTTCTCTTCTCC
AGGAATCGTAAGTGAGGATTAAAGACGGGACTTGAACTCTTCACCCGAAACTCACTCTTGATCTGTCTTTTTCCAAAATAGACACAACCGCATCGCCAAGAAGTTACTAGAACTCAATGA
ACGCGGTAGTTGGAAATCAGACCTGAGCAAACTGAGCGAAGAAGAATTGAAACAACAAGACGATGAGATCTTTGGTACGGCACGACACGTTAATTGCGGTTATTACGCTGGCATCATCCT
TGGAGATTATCTACAGGTGGGCCCTTTGCTTGTAAATTTCCATAGATTTACGCGTAAAGAAACTCATCGGCCCCTTGATCATCACTCGCTTCGCACTCCCCAAGGCCATTTTGAACACCA
CGCAAGCTGATAGCGATTGGAGTCTCAACCCTAGACTTCCGATCAAAAGCATTTTAGGTACCACTCCGAAGGCTACTGGAAATTCGACTAGCGTCGAGTTCAATACCCTTTGTGGGTTTA
ATCCGTTCCACACACAGCCTATAATTTGTGAATGAAAGAACTGAATAGCGCCTCGAGTTTTTTGTTCCCAGATCGATGGCACGCCCCGATCTCGTGGTCTCAGACCGTAAGTTGAATCAA
GATGCTTATTTATATGATAGAAGACTGTTCTTAGTATAAGCTCATCATTCTTTCTGCCTCATTATATTTGTTTAGCACAATGGCTTGAGTCAACTTTTGAAAAAGCTCTACCAAGTCGGA
GTGAGTGCGAGAGCCTTTGTCCTGAGAAATATTCACGACCTATTGATAACAGAGGGTTTTAACTAGAAAATGGGACGAGATGAATATGTCGACTTTGATGGATGCGATTAAAATCTTGAA
AACCAAGTTGAATGCTGCCGATGAAAATGCTCATAATCCCAAAGTTTGGAAGGTTAGTGCTGACAATTTTGAGATTTGAGATTTGCTTCCGCATCTAGCTTGCTGATAGATATTTGATTT
TATCAGTTTTATCGAAACGAGAAGTCAGAATACCTGTGGAGGGTCCACCCGTGGTGGAGTCCGAAGGTGTTTATGAGAGGGACTCGCAAAGTAGTAAATTCCGCGATGAGGATTTGGCGA
GGATCTTGAAGGATTCTACATATGAAGTTGCAGGTGCCTTCGGAGCCAGACATGTACCAGCAGTAATGCGCTGGATTGAATGCCAAGGGATGCGGACGGCGAGGTGTGCATCAAAGGAAT
AGGTCTACCAAGTGGATCTCTCTTAAGATTTGACATGCTTGCGCTTTTTGATTTCTGCAGAGAGATGTTTGGAAATTATGTACGCTAAACGAATTCAGGGCGTTTATTGGCTTGAAGGAA
TTCCAGACATTCCAAGAGTGGAATTCGGACCCAGAAATTGTCAGTAAGACCTTCTTGCATCCAAGCCCACGAAACTAGACCAACTGATCACAAGACATAAATTTGAATCCACAGGCGCTT
CTGCAATGGAGGATCTTGTCGGACACCCAGCCAACATTCCGCTTCATGTTGGTCTGCACGGAGAGGAAGCCAAAAAACCAAGATTGGGATCGGGTGTTTGTCTTCCTTATACCATCAGTC
GAGCTATACTAAGTGACGCAAGTTAGTATCGTTCTTGTGTAACCTTTGCTTTTAAAAAAACACTCATCTTTACCGTATCCTGCTTTTGCTATTCATAGTTTTGCATTGGTTCGAGGAGAT
CGCTTCTATACGGTATTTAGGAACTTGACTCTATCACCCTATCTGACCTCCACGATCCTGAGATATGTTTTTTTCTTAGGAGATAATGCAACTGCAGATGTTATGACCAATTGGGGACTC
GCTGACTGCCAGCCTGATCCTCAAAACGGCGCACCTGGAGGAATGCTCGAAAAACTGATACGCGAGAATCTGTGAGCTTTTTGAGCCGCAGTCCTGTCTTGCATTATGGCCAACTGATTT
CCTCCATTGAGACTCTCAGACCCAACCAATACGCGTTTAATGATGTTGCACTACTATGTAAGTAAAACTTCAAATATTTTACAAGATGTCGCTTCCTCTGATATGATCGCTTGTTATCAG
TTCCCTTCATACTACCTCAGCACTCATATTCCGTCATGCAGAAGATTAGCCCCACCAAAAGGCACTCAACTATGCGATCGATCCTCCCGTACAACCTATCATTGGTTATAAACAGATCCA
GAGCGGTGAAAGAACGCTGGTTTATGAGCTTTCAGGTATGCATGGCATCCAAGTCATCTCGAGGTTGATTGCTGATACTATCCTATCATCTAAAGATACTCCCAGGGTAGAAGCTCAGAG
GATGGGCATGATCGTCGGTTTGGTAAGTTGGTATTGAGTACTCGATTGTGTTTTTCGCGTGTGATGCTTAGACCACCCGTAATTTATCTTTCTCAGGAGACCACATGAATTCCAACATCA
AGCTCGTCTATAAGGCAGTGGAGAAAGTGATGTATCATCAAGATGTAAAACAATACCATGATTTCATTCACAGCCGCATTCAAGAATGCTCCACGAGGCGAAGCCCAGTTTCATCTGATG
AGACAGTTGATGTTCTTCGGGATGTCACAAACCCTTTGGTTTCGGGATGGTGAGTGATCTCACTCAGATACACTTCAACAATTTGCGCTGATGTATCCTCTTAAGGCTCGCTCATGTGTT
CGGCCTTGTCGAGACTGGCATTCACTCGCAACAGCTTCTTCTATCTACCTTGAGTGATGTGTAAGTTCGAACCAAAGCATAAAACCCTCCAGCCTACATCCTGAAGTAAATTCTGTACCC
CTAGTTTTATTGCTATCTAACCGAGTCACCTCAGCGATCTTTCAAAGCTCGTGCAGCTGCGCGAATAGCTGCCTCTGGGTTGACCTGGCAGATCAAATCTCACATTCAAGGATGCGCCCC
TTCTCACGTAAGAGAAAACCCCGAACTGATCTCTACAAGCCTTATACTTTTCCAAGACTTACCCCCTCTGCTTTCGAATTTCGGGATACAGTCTCAGTTGGAGATACGTTCAAGAAGGGC
GCATCTATGGCAATGATGGGGGCTTTGGGAGCGCTTGAAGAGACTGTCAAATTCGTGTCTGGTCAAGATCCTGGATTTAAAGGCGGACATGGCGATACCTTGGCATTTTATAAGACCTTG
ACGGCTGAGAACAATGCTCAGGTTGACCCATTGTCGCCCGATGAACTAGCAGCTGACTGTTTGAGAGCAATTTCCACCTTGGCCTTTACCATCGTAAATGGTACGGCAAATGCGCTGGAC
TATCTTTTGCCCGAAGTTACCAAGCCGGATGAAGTTCCCAGAATTCGAGAAACTTTGGAAACGATCATCAAGGGAAACAACGAACCTGGACTACATGAGGCATTTTCTAGGCATGCATTG
GAAGCCACACGTCTTGGTCACTGGAATGAATCTTTGCGTGGTATGGTATTCAAATCCGAATATCAAAATAGGAATTCTCGCTCTGTGAGGATCACTCGACTTATCTTTCTTTGAAACAAG
AGACTGAATAACGTGATACTCCTTTTAGCTCTACCTATTGGAATCATTGACAGCGATTTTCGACTTGATCGAGATACCTCTTCCTACTTGCGCTTGTTAGATGGTAAGCTCGTCTATGTA
TGGTGCCAATCTAATCAAACGATCAAATTCTGATTCGAGACCGTTTCCTATCTGTCTTTCTCATTTGATTACAGTTTTGAGGGATATTGTCTCTCGGTCTTTGAAAACATTGTGCCTATC
GTAATCAGCCAGGTTTTATCACTTCCTCAAGTCAGACGGGCGCCCGGTGGTCAAGGGAAGTTGGAAAAACTCAAGATTGCGGGTTCGAATTCAGGTATCCCTACGATGCATATTAGATAT
GATGGTACCAAATCATGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCACAACAAACCACTGCCAACAGACCTTATCACTCTCAACAGTCTTCCCAGCCTAAAGCTGGTGAAGCTTTAGTTCAGACTAGAGGATATACTCATCTATTACAGATTGGTTCAGCT
ACTGATTTACCTACTTCAAGCGATTCTGGATTATGGCGTAGAGTTGCTCAATTCCAAGAGACCGCTGGAATTGTCTCGCATTACCTGTTCTCCAAGGGTGGTCAATACGGTCATTTGGAT
AACTATGAAGAATCAGCTACCACTGATAATAAAAAATCAACTTCATTGGCTTACCTCGCTGTTCAACAAACCTTGGCGGGTTTGGTACCAGAGAACCTTGCTATGGTCGCGAACTTATTG
ACTAGCGTTGGAAAACCATTGGATGACCGAAAACTTCAACTTGAAGAAGTCGTCGCTTTTCTCTCTCGTGCTGGAAAGAGAAGACATAACGCTCCTAATAAATATGTTGATGCGGCTCAG
AATCAATTTATCACTTTGCTTTGGAATGATCTCTCTCATCCTCCAACAGTGGATTTGAATCCCAAGCATCGCTTCAGGAAAGCTGATGGAAGTGACAACAACCTGACTGGTGATCCGCTC
CTTGGAGCTGCCAATCAACCGTATTCCAGATCTGTTCGACCGGTTCATCCTGTTCCGACTCACATAGCTGAGCCCGAAGACATGTTCGATGCTATTCTACGTCGTCCTACGGGGTACGAA
GGTTTTACCCCTCACCCAGCTCGCATTTCCAGTTTATTCTTTGGTTTTGCGAATATCGTCATTCACGACATATTCTGGACCAACAATCGCGAAGAAGTCAAAGTCCCGAACAAATATCAC
GAATCGGATCAGAACACAGAACAAGCCGACGACAAACCCAAGAAGCCCAGCCCGTGGCAGAATTTGACGTCATCTTATGCTTCTTTGGATCCTTTATATGGCGTCAGCGATAAGGAACAA
GCAAGTATACGCGACAAAGAACAGCTTGGTCGTGGCTTGTTGTATAACGATACCTTTGCCTCGGATCGATTGCTCATGATGCCGCCAGCTTCATGTGCTTTGCTTGTTCTCTTCTCCAGG
AATCACAACCGCATCGCCAAGAAGTTACTAGAACTCAATGAACGCGGTAGTTGGAAATCAGACCTGAGCAAACTGAGCGAAGAAGAATTGAAACAACAAGACGATGAGATCTTTGGTACG
GCACGACACGTTAATTGCGGTTATTACGCTGGCATCATCCTTGGAGATTATCTACAGCAATGGCTTGAGTCAACTTTTGAAAAAGCTCTACCAAGTCGGAAATGGGACGAGATGAATATG
TCGACTTTGATGGATGCGATTAAAATCTTGAAAACCAAGTTGAATGCTGCCGATGAAAATGCTCATAATCCCAAAGTTTGGAAGTTATCGAAACGAGAAGTCAGAATACCTGTGGAGGGT
CCACCCGTGGTGGAGTCCGAAGGTGTTTATGAGAGGGACTCGCAAAGTAGTAAATTCCGCGATGAGGATTTGGCGAGGATCTTGAAGGATTCTACATATGAAGTTGCAGGTGCCTTCGGA
GCCAGACATGTACCAGCAGTAATGCGCTGGATTGAATGCCAAGGGATGCGGACGGCGAGAGATGTTTGGAAATTATGTACGCTAAACGAATTCAGGGCGTTTATTGGCTTGAAGGAATTC
CAGACATTCCAAGAGTGGAATTCGGACCCAGAAATTGCTTCTGCAATGGAGGATCTTGTCGGACACCCAGCCAACATTCCGCTTCATGTTGGTCTGCACGGAGAGGAAGCCAAAAAACCA
AGATTGGGATCGGGTGTTTGTCTTCCTTATACCATCAGTCGAGCTATACTAAGTGACGCAATTGCATTGGTTCGAGGAGATCGCTTCTATACGGATAATGCAACTGCAGATGTTATGACC
AATTGGGGACTCGCTGACTGCCAGCCTGATCCTCAAAACGGCGCACCTGGAGGAATGCTCGAAAAACTGATACGCGAGAATCTCCACCAAAAGGCACTCAACTATGCGATCGATCCTCCC
GTACAACCTATCATTGGTTATAAACAGATCCAGAGCGGTGAAAGAACGCTGGTTTATGAGCTTTCAGGTATGCATGGCATCCAAGTCATCTCGAGGTTGATTGCTGATACTATCCTATCA
TCTAAAGATACTCCCAGGGTAGAAGCTCAGAGGATGGGCATGATCGTCGGTTTGGACCACATGAATTCCAACATCAAGCTCGTCTATAAGGCAGTGGAGAAAGTGATGTATCATCAAGAT
GTAAAACAATACCATGATTTCATTCACAGCCGCATTCAAGAATGCTCCACGAGGCGAAGCCCAGTTTCATCTGATGAGACAGTTGATGTTCTTCGGGATGTCACAAACCCTTTGGTTTCG
GGATGTTATTGCTATCTAACCGAGTCACCTCAGCGATCTTTCAAAGCTCGTGCAGCTGCGCGAATAGCTGCCTCTGGGTTGACCTGGCAGATCAAATCTCACATTCAAGGATGCGCCCCT
TCTCACTCAGTTGGAGATACGTTCAAGAAGGGCGCATCTATGGCAATGATGGGGGCTTTGGGAGCGCTTGAAGAGACTGTCAAATTCGTGTCTGGTCAAGATCCTGGATTTAAAGGCGGA
CATGGCGATACCTTGGCATTTTATAAGACCTTGACGGCTGAGAACAATGCTCAGGTTGACCCATTGTCGCCCGATGAACTAGCAGCTGACTGTTTGAGAGCAATTTCCACCTTGGCCTTT
ACCATCGTAAATGGTACGGCAAATGCGCTGGACTATCTTTTGCCCGAAGTTACCAAGCCGGATGAAGTTCCCAGAATTCGAGAAACTTTGGAAACGATCATCAAGGGAAACAACGAACCT
GGACTACATGAGGCATTTTCTAGGCATGCATTGGAAGCCACACGTCTTGGTCACTGGAATGAATCTTTGCGTGGTATGGTATTCAAATCCGAATATCAAAATAGGAATTCTCGCTCTCTA
CCTATTGGAATCATTGACAGCGATTTTCGACTTGATCGAGATACCTCTTCCTACTTGCGCTTGTTAGATGTTGAGGGATATTGTCTCTCGGTCTTTGAAAACATTGTGCCTATCGTAATC
AGCCAGGTTTTATCACTTCCTCAAGTCAGACGGGCGCCCGGTGGTCAAGGGAAGTTGGAAAAACTCAAGATTGCGGGTTCGAATTCAGGTATCCCTACGATGCATATTAGATATGATGGT
ACCAAATCATGA

Retrieve as FASTA