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Entry information : TvCcP (CCP1)
Entry ID 10686
Creation 2012-03-05 (Christophe Dunand)
Last sequence changes 2012-03-05 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-27 (Catherine Mathe (Scipio))
Peroxidase information: TvCcP (CCP1)
Name (synonym) TvCcP (CCP1)
Class Cytochrome C peroxidase    [Orthogroup: CcP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Coriolaceae Trametes
Organism Trametes versicolor (Coriolus versicolor )    [TaxId: 5325 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TvCcP
start..stop		 S start..stop
ParcCcP01 645 0 1..380 1..379
DsCcP 617 0 25..381 23..375
CsuCcP 593 0 1..381 1..379
CuniCcP01 587 0 5..380 2..375
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10686' 'join(2690070..2690387,2690455..2690509,2690579..2690660,2690799..2691069,2691127..2691443,2691500..2691599)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2690070..2690387 316 N° 2 2690455..2690509 53 N° 3 2690579..2690660 80 N° 4 2690799..2691069 269
N° 5 2691127..2691443 315 N° 6 2691500..2691599 98  
join(2690070..2690387,2690455..2690509,2690579..2690660,2690799..2691069,2691127 ..2691443,2691500..2691599)


exon

Literature and cross-references TvCcP (CCP1)
DNA ref. JGI genome:   scaffold_2 (2690070..2691599)
Cluster/Prediction ref. JGI gene:   26601
Protein sequence: TvCcP (CCP1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   380
PWM (Da):   %s   41654.87 Transmb domain:   %s   i7-29o
PI (pH):   %s   8.85
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSFAALRASARRAGAAAPAARASRTALRNPAFRKFSTEVPPPPTPKKSSNAALLGALGAAAVGGVGFWIYTSSSDSAREAGTAVKSGVQAAKVAANYVPTQEDYQKVYNRVAEILDSAGD
KGYDDGSYGPVLVRLAWHASGTYDKDSNTGGSNYATMRFEPEAKHGANNGLNVARELLEPVKQEFPWISYGDLWTLAGVASIQEMGGPKVPWRPGRIDGFSTQCTPDGRLPDAAQGADHI
RNIFYRMGFNDQEIVALSGAHALGRCHTDRSGFEGPWTFSPTSVTNEYYKLLLNEKWAWKKWDGPKQLEDKKTRSLMMLPTDYALVQDKSFKKWTKAYADDEQLWFKDFSSVVARLFELG
VPTQQFVSSEPWILKSSDEK*

Retrieve as FASTA  
Remarks Complete sequence from genomic (5 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTTCGCAGCACTCAGAGCATCTGCACGCCGCGCTGGCGCCGCCGCTCCTGCAGCCCGTGCGTCCCGCACCGCCCTGCGCAACCCCGCCTTCCGTAAGTTCTCTACGGAGGTTCCC
CCTCCCCCCACCCCGAAGAAGAGCAGCAACGCAGCTCTTCTTGGTGCTCTCGGCGCCGCCGCTGTGGGTGGTGTCGGCTTCTGGATCTACACCTCCAGCTCCGACTCTGCGAGGGAAGCC
GGCACCGCGGTGAAGTCGGGCGTCCAGGCTGCCAAGGTTGCCGCCAACTACGTCCCCACTCAGGAGGACTACCAGAAGAGGTCGGTCGTTGCTCCGTGCAGCCTAGGCATGTAGAGGGCG
TTGGCGTTGACGTTGAGCTGCTCGCAGGTGTACAACCGCGTTGCCGAAATTCTTGACTCCGCCGGTGATAAGGGGTACGACGCGGTACGTGTCCTTCCGGAGGCGTGTGAGCAGCGCGGT
TCAGGGCTCACGTATCCCGTCCCCGCCCTGCAGATGGCTCCTACGGTCCCGTCCTCGTCCGTCTGGCATGGCATGCGTCGGGTACCTACGATAAGGACTCGAACACTGGCGGCAGAGGTG
AGTTTCGTTCTGTCGAGGCTTCCGGGCGATAAACCGGTATATCGGAGCGCTCGCTGATGCTCTTCTTCCCCGTTATTGCGTATCTGTCTCCGCTCGTCAACCATCATGTCTCCGTCGATG
CGTGTGACCGTAAAGCAACTATGCCACTATGCGCTTCGAGCCTGAGGCCAAGCACGGCGCGAACAACGGTCTGAACGTTGCTCGCGAGCTGCTTGAGCCCGTCAAGCAGGAATTCCCGTG
GATTTCCTACGGCGATCTCTGGACGCTGGCTGGTGTGGCCAGTATCCAGGAGATGGGCGGCCCCAAGGTCCCCTGGCGTCCGGGCCGCATTGACGGCTTCTCCACTCAGTGCACCCCCGA
CGGCCGTCTGCCTGACGCCGCACAGGGTGCCGACCACATCCGCAATATGTAAGCGCTGTATTTGCATCCGTCAAGGCAGACGAACTAACGCCGGGTGTCCCATAGATCTTCTACCGCATG
GGCTTCAACGACCAGGAGATCGTTGCGCTGAGCGGTGCGCACGCGCTCGGGCGCTGCCACACGGACCGCTCCGGATTTGAGGGTCCGTGGACGTTCTCGCCGACGAGCGTAACGAACGAG
TACTACAAGCTGCTCCTTAATGAGAAGTGGGCGTGGAAGAAGTGGGACGGCCCGAAGCAGCTCGAGGACAAGAAGACGCGCTCGCTGATGATGCTACCGACCGACTACGCGCTCGTCCAG
GACAAGTCGTTCAAGAAGTGGACGAAGGCGTACGCGGACGACGAGCAGCTGTGGTTCAAGGAGAGTACGTGTACACACCTTCGCTTGTGGTGTCAGCGGTACTGACTGTTGTGTGTACAG

CTTCTCGTCCGTGGTCGCGCGGCTCTTCGAGCTCGGCGTGCCGACGCAGCAGTTCGTCTCTTCTGAGCCCTGGATTCTCAAGAGCTCGGACGAGAAGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTTCGCAGCACTCAGAGCATCTGCACGCCGCGCTGGCGCCGCCGCTCCTGCAGCCCGTGCGTCCCGCACCGCCCTGCGCAACCCCGCCTTCCGTAAGTTCTCTACGGAGGTTCCC
CCTCCCCCCACCCCGAAGAAGAGCAGCAACGCAGCTCTTCTTGGTGCTCTCGGCGCCGCCGCTGTGGGTGGTGTCGGCTTCTGGATCTACACCTCCAGCTCCGACTCTGCGAGGGAAGCC
GGCACCGCGGTGAAGTCGGGCGTCCAGGCTGCCAAGGTTGCCGCCAACTACGTCCCCACTCAGGAGGACTACCAGAAGGTGTACAACCGCGTTGCCGAAATTCTTGACTCCGCCGGTGAT
AAGGGGTACGACGATGGCTCCTACGGTCCCGTCCTCGTCCGTCTGGCATGGCATGCGTCGGGTACCTACGATAAGGACTCGAACACTGGCGGCAGCAACTATGCCACTATGCGCTTCGAG
CCTGAGGCCAAGCACGGCGCGAACAACGGTCTGAACGTTGCTCGCGAGCTGCTTGAGCCCGTCAAGCAGGAATTCCCGTGGATTTCCTACGGCGATCTCTGGACGCTGGCTGGTGTGGCC
AGTATCCAGGAGATGGGCGGCCCCAAGGTCCCCTGGCGTCCGGGCCGCATTGACGGCTTCTCCACTCAGTGCACCCCCGACGGCCGTCTGCCTGACGCCGCACAGGGTGCCGACCACATC
CGCAATATCTTCTACCGCATGGGCTTCAACGACCAGGAGATCGTTGCGCTGAGCGGTGCGCACGCGCTCGGGCGCTGCCACACGGACCGCTCCGGATTTGAGGGTCCGTGGACGTTCTCG
CCGACGAGCGTAACGAACGAGTACTACAAGCTGCTCCTTAATGAGAAGTGGGCGTGGAAGAAGTGGGACGGCCCGAAGCAGCTCGAGGACAAGAAGACGCGCTCGCTGATGATGCTACCG
ACCGACTACGCGCTCGTCCAGGACAAGTCGTTCAAGAAGTGGACGAAGGCGTACGCGGACGACGAGCAGCTGTGGTTCAAGGACTTCTCGTCCGTGGTCGCGCGGCTCTTCGAGCTCGGC
GTGCCGACGCAGCAGTTCGTCTCTTCTGAGCCCTGGATTCTCAAGAGCTCGGACGAGAAGTAA

Retrieve as FASTA