View Redoxidase 10695

Entry information : PoCcP_PC9

Entry ID	10695
Creation	2012-03-05 (Christophe Dunand)
Last sequence changes	2012-03-05 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2012-04-06 (Catherine Mathe (Scipio))

Peroxidase information: PoCcP_PC9

Name

PoCcP_PC9

Class

Cytochrome C peroxidase [Orthogroup: CcP001]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Pleurotaceae Pleurotus

Organism

Pleurotus ostreatus (Oyster mushroom) [TaxId: 5322 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PoCcP_PC9 start..stop	S start..stop
PoCcP_PC15	776	0	1..375	1..375
AthiCcP01	586	0	1..372	1..370
SlacCcP01	579	0	6..373	6..372
SnivCcP01	577	0	6..372	4..366

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	585074..585370	295	N° 2	584967..585015	47	N° 3	584833..584914	80	N° 4	584620..584773	152
N° 5	584453..584569	115	N° 6	584384..584400	15	N° 7	584190..584333	142	N° 8	584066..584137	70
N° 9	583931..584014	82	N° 10	583762..583870	107
complement(join(583762..583870,583931..584014,584066..584137,584190..584333,5843 84..584400,584453..584569,584620..584773,584833..584914,584967..585015,585074..5 85370))

Literature and cross-references PoCcP_PC9

DNA ref.	JGI genome: scaffold_3 (585370..583762)
Cluster/Prediction ref.	JGI gene: 77045

Protein sequence: PoCcP_PC9

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	375
PWM (Da):	41854.86
PI (pH):	7.6

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MLSTFLRAPARRAVFTASIPKAPVRRQAAFRRFSTAPPSEPAKSNTALYAALGAATVAGLGYWFYASDAGREAVTAAKSGVQSGKVALNFTPTKEDYQKVYNKIVEFVEDAGDYDDGSYG
PVLVRLAWHSSGTYDKETKTGGSNYATMRFEPESTHGANAGLNVARDLMEKVKQEFPWISYGDLWTLGGVCAIQEMSGPKIPWRPGRIDGFAANATPDGRLPDATQGADHLRNIFYRMGF
NDQEIVALSGAHALGRCHADRSGFEGPWTFSPTTLTNDYYKLLFDEKWVWKKWNGPKQLEDKKTRSLMMLPTDYVLITDKSYKKFARAYADNQDLFFKDFSAAVSRLFELGVPESQWVTS
EPWEMKTKEEQEAEK*

Retrieve as FASTA

Remarks

Complete sequence from genomic (9 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCTCTCGACGTTCCTCCGTGCGCCAGCTCGCAGAGCAGTATTTACCGCCTCGATCCCAAAAGCACCGGTGCGCAGGCAGGCTGCTTTCCGCAGATTCTCGACCGCACCGCCCAGCGAA
CCAGCGAAGTCAAATACTGCTTTGTACGCTGCTTTGGGCGCCGCGACCGTTGCTGGTCTCGGTTATTGGTTCTACGCCTCCGATGCTGGCCGCGAGGCTGTTACGGCTGCAAAATCTGGC
GTTCAGTCCGGCAAGGTGGCCTTGAACTTTACCCCTACGAAAGAGGATTATCAAAAGGTCGGTGAAAGGTTGGGAATATGGGTTAGGAGGTGTCTGACCCTCCGACGGTGGATAGGTGTG
TACAACAAAATTGTCGAATTTGTTGAGGACGCCGGCGATTACGACGGTAAACGTTATCGCTCGCTTGTTGTATTTACTCACACTGATAAGCATCGCAGACACGGTTCGTATGGCCCTGTT
CTCGTCCGCCTCGCATGGCACAGCTCGGGTACTTATGATAAAGAGACAAAAACCGGCGGCAGGTGAGAATCCATTTGAAAGCAGCGATGCGCGGCCTCTGATCACGACACGGGATTCATA
GCACAACTATGCCACCATGCGCTTCGAGCCCGAGTCTACTCACGGCGCCAACGCCGGGCTTAATGTAGCCCGTGATCTCATGGAGAAGGTTAAGCAGGAATTCCCGTGGATTAGTTACGG
TGACTTGTGGACTCTTGGTGGTGTTTGCGCAATTCAGGTGAGTTCTCATCCGACCGCCCCTCTGCGGCATAGTAAATCCCTCGGCAGGAGAAATGTCTGGTCCCAAGATTCCCTGGCGTC
CTGGGCGTATCGACGGCTTCGCTGCCAACGCTACTCCTGACGGTCGCCTCCCGGATGCTACGCAAGGTGCTGACCATCTCCGCAACGTGAGTTATGCTCGTGTCTTGTACTCGTACAACA
TTCTGATTCACCCCCCAGATATCTTCTACCGTATGGGGTGTGTCCATCGGCTTTGCATGTTCTCCCATTCATGCTAAATTAATTTAGATATTCAATGACCAAGAAATTGTCGCTCTCTCT
GGTGCCCACGCTCTTGGACGCTGCCACGCCGACCGCTCCGGATTCGAGGGCCCCTGGACATTCTCGCCTACTACTCTGACCAATGATTACTACAAGCTTCTGTTCGACGAGAAGTATGTG
CATAATTTTCCATCATCAACGACTTATTACTGATTGATCTACTAGATATGGGTATGGAAGAAGTGGAACGGCCCTAAACAGCTCGAGGATAAGAAGACACGTTCTTTGATGATGCTTCCG
TAATGCCAGTTGTTGATCTCGAAGTTTTTTCTACTAACGCCGCACTACAGCACACGGATTATGTTCTCATCACCGACAAGAGCTACAAGAAATTCGCTAGGGCCTACGCTGATAACCAGG
ACCTATTCTTCAAGGAGTACGTACCTCTCATCAATCTCTATCTATCTGTCAACATCTGACCTGACCGTTACTCCAGCTCTTCTCCGCTGCTGTCTCTAGGCTCTTCGAACTTGGTGTCCC
TGAGTCTCAGTGGGTGACTTCTGAGCCCTGGGAGATGAAGACCAAGGAGGAGCAAGAGGCTGAGAAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA