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Entry information : GsppAPx-CcP
Entry ID 10698
Creation 2012-03-05 (Christophe Dunand)
Last sequence changes 2012-03-05 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-22 (Catherine Mathe (Scipio))
Peroxidase information: GsppAPx-CcP
Name GsppAPx-CcP
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Fungi/Metazoa; Fungi; Basidiomycota; Basidiomycota
Organism Ganoderma sp. 10597 SS1    [TaxId: 767862 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GsppAPx-CcP
start..stop		 S start..stop
DsAPx-CcP 819 0 1..532 1..534
ParcAPx-CcP02 768 0 13..540 13..541
ParcAPx-CcP01 647 0 8..540 7..539
AdelAPx-CcP 405 1.37e-136 7..511 5..491
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 978484..978705 220 N° 2 978770..978856 85 N° 3 978909..978975 65 N° 4 979031..979076 44
N° 5 979139..979414 274 N° 6 979466..979579 112 N° 7 979644..979824 179 N° 8 979892..980254 361
N° 9 980313..980603 289  
join(978484..978705,978770..978856,978909..978975,979031..979076,979139..979414, 979466..979579,979644..979824,979892..980254,980313..980603)


exon

Literature and cross-references GsppAPx-CcP
DNA ref. JGI genome:   scaffold_4 (978484..980603)
Cluster/Prediction ref. JGI gene:   127620
Protein sequence: GsppAPx-CcP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   548 (528)
PWM (Da):   %s   58116.19 (56055.1)  
PI (pH):   %s   4.41 (4.37) Peptide Signal:   %s   cut: 21 range:21-548
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSLGISRLSSILLLAACASAYTWPNPQLDELESLVYDQHGFNERGILAGALAPCNAFNFGSTVNRSNAADWIRTAYHDMATHNVEDGTGGLDASIQFEQDRPENAGDGFFNSLRHLQLGI
SRYVGVADFIALGAKTAVEQCGGPHLPFRGGRVDATEAGVPGVPQPQESLDSHTAAFARQGFNQTEMITLIACGHSFGGVQNSAFPQIVPLPDGVSDVSQTFDSTPFTFDNNVAAEYIHG
TTNNPLVVGHNDTTNSDKCIFGSDGNATMSGFAADPASFRLACQSLLTRMLDTVPKTVQLTEVIEPLPVKPQAIALTYMDDGTFHLTGQARFWNMVYSASRSVKLLWADRDGKTDPAYAS
VLGTNGQMAATALYDGTVAVQWYNVGPLSTNYTVIDAATGISKVWFEVDEGDGSAPTTQDQGGAGFAVQDVVMVANSSCIVQSTGNAHIQIAVRADKTPSRVYVEYDLFNGATGDGAAWI
TVNTTDAQPEATGQKRAGEAYTFWTADLSPSAVARSLNQRVNVAADIDGAKVSTSSFGPFAFGVWASC*

Retrieve as FASTA  
Remarks Complete sequence from genomic (8 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCATTGGGCATCTCGCGCCTCTCGAGCATCCTCCTACTCGCGGCCTGCGCCTCTGCGTACACCTGGCCGAACCCTCAGCTCGACGAGCTCGAGAGCTTGGTGTACGACCAGCATGGC
TTCAACGAGCGCGGCATCCTCGCGGGCGCACTTGCCCCTTGCAACGCGTTCAACTTCGGCAGCACAGTCAACCGGTCGAACGCAGCCGACTGGATTCGGACGCGGTGCGTGCCACGTCGG
CTCGTTTTTGCATGCCTGGAGATGGAGACTGACATGGCTCGAGTGCAGGCCTACCATGACATGGCTACTCACAATGTAGAAGATGGCACTGGTGGTCTTGATGCCTCGATCCAGTTCGAG
CAGGACAGGCCCGAGAGGTAAATAAGTGGATAAGATCCTCGCGAACCATCCTGCTGACTTGTGGTGTAGAACGCTGGGGACGGTTTCTTTAACTCCCTGAGACACCTCCAGTTGGGTATC
AGTCGCTATGTGGGAGAGGTAGATTTTCAGATGTGCGGTCAATGCCTGAATCTATGGCTTACGAACTGTGCAGTTGCGGACTTCATCGCCCTTGGAGCAAAGACTGCCGTCGAGCAATGT
GGTAGGTCCATTCCGGTCTTCGTCCATTGACCAGTCTTCCGCAGCTGATAAAATACACTATAGCGGTGGTCCCCATCTCCCCTTCCGCGGCGGGCGTGTGGATGCCACTGAGGCCGGGGT
CCCCGGTGTTCCCCAGCCGCAAGAGAGTCTTGATAGCCACACCGCTGCATTTGCCCGTCAGGGCTTCAACCAGACCGAGATGATCACTCTCATCGCATGTGGACACTCCTTCGGTGGCGT
ACAGAATAGCGCATTCCCGCAGATTGTGCCGCTTCCAGACGGGGTTAGCGACGTGTCCCAGACGTTTGACAGCACGCCGTTCACTTTCGACAACAATGTGTGTATGTGTTGCCCGTCCGT
TGATGGCGTTCATCTACTGACGGTTAGCGCAGTGCGGCCGAGTACATCCACGGCACGACGAACAACCCTCTCGTGGTGGGCCACAACGATACCACCAACTCTGACAAGTGCATCTTTGGG
AGTGACGGCAATGCGACCATGAGCGGGGGTGCGTACAACTTGTAATGTCGCTGCATACTGGTTGGGATTGAGCGGAGAGGTTTGGCGACAAGGTTCGCCGCAGACCCTGCTTCATTTCGG
TTGGCGTGCCAGTCGCTGCTCACCCGAATGCTGGACACCGTCCCGAAGACTGTACAGCTCACCGAGGTCATCGAGCCGCTCCCCGTGAAGCCACAGGCCATTGCACTCACGTACATGGAT
GATGGTACCTTCCATCTCACAGGACAAGCTCGCGCGTACGTGCTCTACGAATAACAGTCCATTGTAACAGCTCCGTGAACTCGCCGTCCTTGAATCGCACAGTTCTGGAACATGGTCTAT
AGCGCCTCACGCTCCGTCAAGCTCCTCTGGGCCGACCGCGACGGGAAGACCGACCCCGCATACGCCAGCGTCCTGGGCACCAACGGGCAGATGGCTGCGACTGCGCTCTACGATGGCACG
GTCGCCGTCCAGTGGTACAACGTCGGCCCGCTCTCGACTAACTACACGGTCATCGACGCCGCGACCGGGATCTCGAAGGTCTGGTTCGAGGTCGACGAGGGCGATGGGAGCGCCCCGACA
ACGCAGGACCAGGGCGGCGCGGGCTTCGCCGTGCAGGACGTGGTCATGGTCGCCAATTCGTCGTGCATCGTGCAGTCCACTGGCAATGCCCACATTCAGATTGCCCCGTGAGTTCCGACT
GCGCTCGTAATCGGGTTGAGACTAAACAACCCTTGGGGGGTACAGGTGCGTGCAGACAAGACGCCGTCGCGGGTATACGTGGAGTACGACCTTTTCAACGGGGCGACCGGCGATGGCGCC
GCGTGGATCACCGTCAACACGACCGACGCGCAACCGGAGGCTACTGGCCAGAAGAGGGCTGGGGAGGCATACACATTCTGGACGGCGGACCTGTCGCCCTCGGCGGTAGCACGTTCGCTT
AACCAGAGGGTCAACGTCGCCGCGGACATCGATGGCGCGAAGGTCTCGACGTCGAGCTTCGGGCCGTTCGCCTTCGGCGTGTGGGCAAGCTGCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCATTGGGCATCTCGCGCCTCTCGAGCATCCTCCTACTCGCGGCCTGCGCCTCTGCGTACACCTGGCCGAACCCTCAGCTCGACGAGCTCGAGAGCTTGGTGTACGACCAGCATGGC
TTCAACGAGCGCGGCATCCTCGCGGGCGCACTTGCCCCTTGCAACGCGTTCAACTTCGGCAGCACAGTCAACCGGTCGAACGCAGCCGACTGGATTCGGACGGCCTACCATGACATGGCT
ACTCACAATGTAGAAGATGGCACTGGTGGTCTTGATGCCTCGATCCAGTTCGAGCAGGACAGGCCCGAGAACGCTGGGGACGGTTTCTTTAACTCCCTGAGACACCTCCAGTTGGGTATC
AGTCGCTATGTGGGAGTTGCGGACTTCATCGCCCTTGGAGCAAAGACTGCCGTCGAGCAATGCGGTGGTCCCCATCTCCCCTTCCGCGGCGGGCGTGTGGATGCCACTGAGGCCGGGGTC
CCCGGTGTTCCCCAGCCGCAAGAGAGTCTTGATAGCCACACCGCTGCATTTGCCCGTCAGGGCTTCAACCAGACCGAGATGATCACTCTCATCGCATGTGGACACTCCTTCGGTGGCGTA
CAGAATAGCGCATTCCCGCAGATTGTGCCGCTTCCAGACGGGGTTAGCGACGTGTCCCAGACGTTTGACAGCACGCCGTTCACTTTCGACAACAATGTTGCGGCCGAGTACATCCACGGC
ACGACGAACAACCCTCTCGTGGTGGGCCACAACGATACCACCAACTCTGACAAGTGCATCTTTGGGAGTGACGGCAATGCGACCATGAGCGGGTTCGCCGCAGACCCTGCTTCATTTCGG
TTGGCGTGCCAGTCGCTGCTCACCCGAATGCTGGACACCGTCCCGAAGACTGTACAGCTCACCGAGGTCATCGAGCCGCTCCCCGTGAAGCCACAGGCCATTGCACTCACGTACATGGAT
GATGGTACCTTCCATCTCACAGGACAAGCTCGCTTCTGGAACATGGTCTATAGCGCCTCACGCTCCGTCAAGCTCCTCTGGGCCGACCGCGACGGGAAGACCGACCCCGCATACGCCAGC
GTCCTGGGCACCAACGGGCAGATGGCTGCGACTGCGCTCTACGATGGCACGGTCGCCGTCCAGTGGTACAACGTCGGCCCGCTCTCGACTAACTACACGGTCATCGACGCCGCGACCGGG
ATCTCGAAGGTCTGGTTCGAGGTCGACGAGGGCGATGGGAGCGCCCCGACAACGCAGGACCAGGGCGGCGCGGGCTTCGCCGTGCAGGACGTGGTCATGGTCGCCAATTCGTCGTGCATC
GTGCAGTCCACTGGCAATGCCCACATTCAGATTGCCGTGCGTGCAGACAAGACGCCGTCGCGGGTATACGTGGAGTACGACCTTTTCAACGGGGCGACCGGCGATGGCGCCGCGTGGATC
ACCGTCAACACGACCGACGCGCAACCGGAGGCTACTGGCCAGAAGAGGGCTGGGGAGGCATACACATTCTGGACGGCGGACCTGTCGCCCTCGGCGGTAGCACGTTCGCTTAACCAGAGG
GTCAACGTCGCCGCGGACATCGATGGCGCGAAGGTCTCGACGTCGAGCTTCGGGCCGTTCGCCTTCGGCGTGTGGGCAAGCTGCTGA

Retrieve as FASTA