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Entry information : PgrCcP01
Entry ID 10710
Creation 2012-03-07 (Christophe Dunand)
Last sequence changes 2012-03-07 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-03 (Catherine Mathe (Scipio))
Peroxidase information: PgrCcP01
Name PgrCcP01
Class Cytochrome C peroxidase    [Orthogroup: CcP002]
Taxonomy Fungi/Metazoa; Fungi; Basidiomycota; Basidiomycota
Organism Puccinia graminis f. sp. tritici    [TaxId: 56615 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PgrCcP01
start..stop		 S start..stop
PUtriCcP01 616 0 1..314 1..314
CqueCcP01 538 0 1..314 1..314
MlpCcP01 504 0 1..314 1..314
MvioCcP01 422 5.05e-150 1..290 1..283
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10710' 'join(1455155..1455305,1455379..1455540,1455606..1455808,1455913..1455960,1456056..1456178,1456267..1456524)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1455155..1455305 149 N° 2 1455379..1455540 160 N° 3 1455606..1455808 201 N° 4 1455913..1455960 46
N° 5 1456056..1456178 121 N° 6 1456267..1456524 256  
join(1455155..1455305,1455379..1455540,1455606..1455808,1455913..1455960,1456056 ..1456178,1456267..1456524)


exon

Literature and cross-references PgrCcP01
DNA ref. JGI genome:   supercontig_2_8 (1455155..1456524)
Cluster/Prediction ref. JGI gene:   24715
Protein sequence: PgrCcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   314
PWM (Da):   %s   35029.2  
PI (pH):   %s   6.35
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPSREFDYDAVCDSIRRILNQPGYDNYDEDVKHTAGPVLVRLAWHAAGTYDKETDTGGSDGAGMRYEAEGGDPANAGLQHARVFLEPVKKEHPWITYADLWTLAGVVAVKEMGGPQVHWK
PGRTDFMDDSKCPPRGRLPDASLAHDHLRQVFYRMGFNDREIVALSGAHNLKCHTDRSGYEGPWVNNPTRFSNQYFKLLKKLEWKPKKWGGPLQFVNSDFGEELMMLPTDRALVSDPSFS
QWVDKYAEDRDLFFSDFADAFSKLLELGVKRDQHSYKPAGKKSDQPGAPGSSAQDAEAEPVRRGNIATGKTKL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCTCTAGAGAATTCGACTACGACGCTGTTTGCGACTCTATCCGCCGTATTCTTAACCAACCTGGCTACGATAATTACGACGAGGATGTCAAACATACCGCTGGCCCAGTGCTCGTT
CGATTAGCCTGGCATGCTGCCGGGACCTATGTGGTAAGTTGATTCAAGACCAATTCTCAATTCTTAAGCAGCAGACCTGACTGATACTTTTTTCGTAATTTACCAGATAAGGAGACTGAT
ACGGGTGGCTCAGATGGTGCCGGAATGAGATACGAGGCCGAAGGTGGGGACCCCGCTAACGCAGGACTTCAACATGCCCGAGTATTTCTAGAACCTGTCAAGAAGGAACACCCTTGGATT
ACCTACGCTGATCTGTGGACACTAGCCGCGGTATGTCCAACTTACTCTCACCTGACTCAATCTCACATCCAACTCATCCATCGTTGAATCCATAGGTGTGGTAGCGGTAAAGGAGATGGG
CGGGCCCCAAGTACACTGGAAGCCTGGCCGAACGGACTTCATGGATGACTCCAAGTGCCCACCTAGAGGTCGACTTCCTGATGCCTCCTTGGCACATGACCATCTTCGCCAAGTCTTTTA
TCGTATGGGGTTCAATGATCGCGAGATTGTCGCCTTGTCCGGAGCCCATAACTTGGGCGCGTAAGTCTTGGATACCTAAATATTTCTTCGTTACAATCAAACGATTTCCATCACACTCAG
GCTCATCTTTCGATTTCGATTTTTTTGTTTTTGCTTTTCATCAGAAATGCCACACGGACCGATCAGGCTACGAAGGCCCTTGGGTGAACAATATGTAAGTCGAAACTCTGAACGTCGGGA
ATCCGCGGAAACTCATCCTGCCTGTTATTTTTTGTGGGTGTCTCCAATAATCCTCTCGCTGCTCACTAGCCCACAAGATTCAGCAACCAATACTTCAAGCTCCTCAAGAAATTAGAGTGG
AAGCCCAAGAAGTGGGGTGGACCACTGCAATTTGTGAATTCGGACTTTGGCGAAGAGTTGATGATGCTACCTCTGTAGGTTCCATTGATGCATGATGTTTCTTGACTGTCGATATCGTGA
TACTGATCACATTTCCTCAAAAAAATTCAATGATACCTCCAGACCGATCGCGCTTTGGTTTCCGATCCGTCGTTCAGTCAGTGGGTCGACAAATACGCCGAGGATCGAGACCTCTTTTTC
TCCGACTTTGCCGATGCCTTTTCCAAGCTGCTTGAGCTTGGTGTCAAGAGAGATCAGCACTCTTACAAACCAGCCGGCAAGAAATCCGATCAGCCTGGGGCCCCCGGTTCCAGTGCTCAG
GATGCTGAAGCCGAGCCCGTCAGACGGGGTAATATCGCCACGGGCAAGACCAAGTTGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCTCTAGAGAATTCGACTACGACGCTGTTTGCGACTCTATCCGCCGTATTCTTAACCAACCTGGCTACGATAATTACGACGAGGATGTCAAACATACCGCTGGCCCAGTGCTCGTT
CGATTAGCCTGGCATGCTGCCGGGACCTATGATAAGGAGACTGATACGGGTGGCTCAGATGGTGCCGGAATGAGATACGAGGCCGAAGGTGGGGACCCCGCTAACGCAGGACTTCAACAT
GCCCGAGTATTTCTAGAACCTGTCAAGAAGGAACACCCTTGGATTACCTACGCTGATCTGTGGACACTAGCCGGTGTGGTAGCGGTAAAGGAGATGGGCGGGCCCCAAGTACACTGGAAG
CCTGGCCGAACGGACTTCATGGATGACTCCAAGTGCCCACCTAGAGGTCGACTTCCTGATGCCTCCTTGGCACATGACCATCTTCGCCAAGTCTTTTATCGTATGGGGTTCAATGATCGC
GAGATTGTCGCCTTGTCCGGAGCCCATAACTTGGGCAAATGCCACACGGACCGATCAGGCTACGAAGGCCCTTGGGTGAACAATCCCACAAGATTCAGCAACCAATACTTCAAGCTCCTC
AAGAAATTAGAGTGGAAGCCCAAGAAGTGGGGTGGACCACTGCAATTTGTGAATTCGGACTTTGGCGAAGAGTTGATGATGCTACCTACCGATCGCGCTTTGGTTTCCGATCCGTCGTTC
AGTCAGTGGGTCGACAAATACGCCGAGGATCGAGACCTCTTTTTCTCCGACTTTGCCGATGCCTTTTCCAAGCTGCTTGAGCTTGGTGTCAAGAGAGATCAGCACTCTTACAAACCAGCC
GGCAAGAAATCCGATCAGCCTGGGGCCCCCGGTTCCAGTGCTCAGGATGCTGAAGCCGAGCCCGTCAGACGGGGTAATATCGCCACGGGCAAGACCAAGTTGTGA

Retrieve as FASTA