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Entry information : PindLDS02
Entry ID 10735
Creation 2012-03-09 (Christophe Dunand)
Last sequence changes 2012-03-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-09 (Christophe Dunand)
Peroxidase information: PindLDS02
Name PindLDS02
Class Linoleate diol synthase (PGHS like)    [Orthogroup: LDS001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Sebacinaceae Piriformospora
Organism Piriformospora indica    [TaxId: 65672 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PindLDS02
start..stop		 S start..stop
JargLDS02 872 0 61..1098 4..1041
SbreLDS02 859 0 89..1098 60..1068
SlutLDS02 852 0 89..1098 60..1067
PinvLDS02 850 0 90..1098 61..1055
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 25231..25302 70 N° 2 25023..25169 145 N° 3 24872..24979 106 N° 4 24075..24826 750
N° 5 23954..24031 76 N° 6 23753..23906 152 N° 7 23442..23703 260 N° 8 23351..23394 42
N° 9 23169..23304 134 N° 10 22725..23118 392 N° 11 22443..22674 230 N° 12 22194..22391 196
N° 13 22115..22141 25 N° 14 21919..22063 143 N° 15 21710..21871 160 N° 16 21566..21660 93
N° 17 21235..21516 280 N° 18 21172..21186 13  
complement(join(21172..21186,21235..21516,21566..21660,21710..21871,21919..22063 ,22115..22141,22194..22391,22443..22674,22725..23118,23169..23304,23351..23394,2 3442..23703,23753..23906,23954..24031,24075..24826,24872..24979,25023..25169,252 31..25302))


exon

Literature and cross-references PindLDS02
DNA ref. GenBank:   CAFZ01000028.1 (25302..21172)
Protein sequence: PindLDS02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1100
PWM (Da):   %s   123110.41 Transmb domain:   %s   o10-32i
PI (pH):   %s   6.72
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSVTPPSPTPTVTSRVGEVLYATLNDSFDTAIHAVDEIYTANATMPGARDVDEDYDNGPQSPIAKSLYGAKNELNRWRGKSPPLPSFEIVSGLVDAGLNKGSIDDRKLLLEAALSTMSSL
PKGALSDTLNRKTVALLYRDLPHPPPTFINNQYAWRQPDGSHNNPANPDLGKAGMPYARNVQSHTPMPMSEQPDPGLIFDSLLRRDRFRPHPAGNSALLFGFATLVIHTCFRTNHGDWTI
NDTSSYVDLSPLYGNSLEGQLKLRRQDGTGKMWNDVFAEDRLLFLPPISCALLVLFCRNHNYIAQKLLEINEKGRWKCPPPDDEQARMTQDDEIFNIARLINCGHFAGIVFSDYLAGILG
LSHDANPWSLDPFSEIRNEDHTIVERGCGNANSVEFNLLYRWHATLSEPDVAWVERIFASSFAGKSAEEITIRDFNQVTENLREASRRDIKTWTFAGLHRGEDGKFHDSDIAKILMDATS
HPAGAFGARHTPGIMRTIEIMTIQMARKWGVCTLNEFRKSLGLPYTTFQEWNPDPAIWMPAQALYEQVDRLELYVGLQAEDTKKPGPGAGLCPGYTISRAILDAIALTRGDRFYTYDFTP
STYTSWGYKDCQRDPTNPGAGSVLGPLFLRTLPNNYRPDSVFTWFPMLTPEATRKNLTRLGKADKYTFERPGELSMIKSVEDVGAVMDYTTGRGSRVVRSVYGPKAREIMDGGGYFVLLD
DVRADMHRRAIQQAIFHNVEHTGPIARAIESKMRALIHHKSFELVKGKTKCIDIVKDVVNLAPIHWIADAGLPLKTHDHMKGTIFEQQADQIFKDIYSYIFHEIDPSLLVNFRGIVKKHV
SFMMRYIEPQVQDSNGIIPSVAAIKDAIVGIWVDRRGDCGRFYDSMVANGFSRTDVMNDVLALAVLATVELSHLLVHVINFYLEEENKEYRDRITAAAFGDETVTAAELEGYVREAIRLD
PVTVGVMREITTGTLSQASGQPLQANERIFVSLKKAMVEDLYPHPKSVDLHRSKEQKLLLGDGTSKLLGEDYILDVGAHVLKAVFSLKNLRRAPGPSGTLRRYVQDHNGTKQYFYLDQKQ
KISPWPTSMLLQYDQV*

Retrieve as FASTA  
Remarks Complete sequence from genomic (17 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGGTGACCCCGCCTTCACCAACCCCGACCGTGACCTCGCGCGTCGGAGAGGTCCTCTACGCGACTCTGGTTAGTAATATCCACATTTGCGTTTCCAGACTGCATTCTGAACTCTTC
CTTTGTTATGTAGAAAACGACTCGTTTGACACTGCCATTCATGCTGTCGACGAGATTTATACCGCAAACGCTACCATGCCCGGCGCCAGAGACGTGGATGAAGATTACGACAATGGTCCC
CAAAGTCCTATTGCAAAGAGCTTGTATGGCGCCAAAAACGAAGTACGCTCCATGTTTTCCCCCTGGTCTGCTCTGACGTTCGCAGCTCTCAACAGGTGGCGGGGCAAAAGTCCCCCTCTC
CCAAGCTTCGAAATCGTCAGTGGACTCGTCGACGCAGGCCTCAACAAGGGTAGCATAGATGACCGGAAACTCTTGGTGTGTGCTCTTGCCCTGCTCAGGCCACCTTCTGACCCTCCCTAG
CTCTCGAAGCTGCCCTGTCAACAATGTCTTCGCTCCCCAAAGGTGCTCTCTCAGATACGCTTAACAGAAAGACGGTCGCCCTTCTCTATCGTGATTTACCTCACCCGCCGCCGACGTTTA
TAAACAACCAATACGCATGGCGACAACCCGATGGTTCGCACAACAATCCGGCGAACCCCGACCTCGGCAAGGCAGGGATGCCCTATGCACGCAACGTGCAGTCCCATACCCCAATGCCCA
TGAGCGAGCAGCCCGATCCTGGCCTCATCTTCGATTCGCTCCTCAGGAGGGACCGTTTCAGGCCCCATCCAGCCGGCAACTCTGCCCTTCTTTTCGGTTTCGCGACGCTTGTCATTCATA
CTTGCTTCCGCACCAATCACGGTGACTGGACGATCAACGATACCTCGTCCTACGTCGATCTCTCGCCACTCTACGGCAACTCCCTCGAGGGTCAGTTGAAGCTTCGTAGACAAGATGGTA
CCGGAAAGATGTGGAACGACGTCTTCGCCGAGGATAGGCTCCTTTTCCTCCCGCCTATCAGCTGTGCACTTCTCGTTCTCTTCTGCAGAAACCACAACTATATCGCCCAGAAGCTCCTCG
AGATCAATGAGAAGGGTCGTTGGAAGTGCCCGCCACCCGACGATGAGCAGGCTCGCATGACCCAAGACGACGAAATCTTCAATATTGCCCGTCTCATCAATTGTGGACACTTTGCTGGCA
TTGTCTTCAGCGACTATCTTGCAGGCATTCTCGGGTATGTGTACCTTGTCCTTGTGGATGTTGCTCATTCATATTAGGCGCTATCCCACGATGCTAATCCCTGGTCCCTGGATCCCTTCT
CCGAGATTCGTAATGAGGACCACACCATTGTCGAGCGGTAGGCCCTTCATTGATTACGTAGATCTGTTACTGATTATTGACCAGTGTGGTTGCGGTAACGCGAACAGCGTCGAGTTCAAC
CTTCTCTATCGCTGGCACGCCACCCTTTCCGAGCCAGACGTCGCTTGGGTTGAGCGCATATTCGCGTCGAGCTTTGCTGGAAAGTCTGCCGAGGAAATCACCATCCGTGATTTCAACCAG
GTAGGTTGGAATCTGACGCGCTTTATAGTTGGCTGAAAGTTGGTGATAGGTGTCACAGAAAATCTTAGAGAGGCCTCTAGGAGAGACATCAAGACGTGGACGTTTGCTGGTCTGCACCGC
GGGGAAGATGGGAAATTCCACGACTCTGATATTGCCAAAATCCTCATGGATGCCACCTCCCACCCAGCAGGCGCGTTTGGTGCTCGCCATACACCAGGTATCATGCGCACGATTGAGATC
ATGACTATCCAAATGGCTCGAAAGTGGGGTGTATGCACGCTCAACGAGTTCAGGAAGAGTCTTGGCTTGAAGCGTGGGTGCTAAGTTTTTCTCATTGACGGTTCCGTTGACACCCCTAAG
CGCGTACACTACGTTCCAGGAGTGGAATCCAGATCCAGCCATCTGGGTGAGTGCAAATTCACTCTTACGAACCGAGGTTGAACATGTTTTAGATATGCCCGCTCAGGCTCTCTATGAGCA
AGTGGACAGGCTCGAGCTCTATGTCGGTCTTCAGGCAGAGGATACTAAGAAGCCTGGGCCTGGTGCCGGTTTGTGCCCAGGATACACAATCTCTAGGGCTATTCTCGCGGGTACGAAAGT
CCCTTTGATTATTCTGACGATTCTTTGACGGTCATAACAGATATGCCATCGCGTTGACTCGTGGAGATCGATTCTACACTTACGATTTCACCCCATCGACCTATACTTCTTGGGGTTACA
AGGATTGCCAGCGCGATCCCACGAACCCTGGTGCTGGATCTGTTCTTGGTCCGCTCTTCCTTCGCACGCTGCCGAACAACTACCGCCCAGACTCCGTCTTCACGTGGTTCCCGATGCTTA
CCCCCGAAGCTACGCGAAAGAACCTCACCCGCCTTGGCAAGGCGGACAAGTATACTTTTGAGCGACCCGGAGAATTGAGCATGATCAAATCCGTCGAAGACGTCGGCGCAGTTATGGACT
ACACTACCGGTCGCGGATCAAGGGTTGTCAGGAGCGTGTATGGACCCAAGGCGCGCGAGATCATGGATGGTGGCGGGTAAGGCTACGTCCCAGTTGTGGGAAGAATGAGGCCAACGCTTT
CTCTAGGTGTACTTTGTACTTTTGGATGACGTCCGAGCAGACATGCACCGTCGCGCAATTCAGCAAGCCATTTTCCACAATGTCGAGCACACTGGTCCGATCGCCCGCGCAATCGAGTCC
AAGATGCGTGCTCTTATTCACCACAAGAGTTTCGAGCTCGTCAAGGGCAAGACAAAATGCATCGACATTGTCAAGGACGTTGTCAACCTGGCACCCATTCATTGGATCGCCGACGCCCTC
GTGAGCTCCTAGCTGACTCCAGAGCTGAATATGCAACTCATATCGTCGCAGGGGGTCTTCCTCTCAAGACACATGATCACATGAAGGGAACCATCTTCGAGCAGCAAGCTGATCAAATCT
TCAAGGATATTTACTCGTACATCTTCCACGAGATTGACCCCTCGCTCTTGGTCAACTTCCGTGGGATTGTCAAGAAGCATGTCAGCTTTATGATGCGCTACATCGAGCCTCAAGTACAGG
ATTCGAATGGCGTACGTGGAGCTTAATGTGTGCTATGCTTCCTTTGTTGACATAAGGCTATAGATATCATCCCCAGCGTTGCGGCAATCAAGGTATGGCATGCGAAGTCTTTGGAACATG
TAAGATTGAACACCCCTTCGTAGGAGACGCTATCGTTGGCATCTGGGTCGACCGTCGTGGAGACTGCGGTCGCTTCTACGATTCCATGGTAGCCAATGGCTTCTCTAGGACCGACGTCAT
GAACGATGTGCTTGCGCTTGCCGTTCTGGCCACAGTCGAACTTTCTCACTGTGAGTCTTTCATTTACAAATATATACAGGTTCATGACGGGGTATAGTGTGCTCGTTCATGTGATCAACT
TCTATCTCGAAGAGGAGAACAAGGAATATCGTGATCGCATCACTGCCGCCGCCTTTGGCGACGAGACTGTCACAGCTGCAGAGCTCGAGGGATATGTGCGCGAAGCGATTCGCTTGGATC
CTGTCACTGTTGGCGTCATGCGTGAGTCACTACTTGACTTTTTCGTCACCTAGTCTGACGGGGAACCCAGGCGCGAGATTACGACGGGTACTTTATCTCAGGCCAGTGGGCAACCATTGC
AAGCCAACGAGCGCATATTTGTCAGCTTGAAGAAGGCCATGGTCAACGTGAGTGCAGATGCGAAGTCAAGGGTCGTGCAGCGCTGACTCTAAGCAGGAGAGGACCTCTACCCTCATCCCA
AGTCCGTTGATCTCCATAGGTCCAAGGAGCAAAAACTTCTGCTGGGTGACGGAACCTCCAAGCTGCTCGGCGAGGATTATATCCTCGACGTCGGTGCTCACGTCCTCAAGGCCGTCTTCA
GTCTCAAGAACCTCCGCCGTGCGCCCGGACCGTCTGGAACACTTCGTCGATATGTCCAAGATCACAATGGTACGAAGCAGTACTTCTATCTCGACCAAAAGCAAAAGATCAGCCCATGGC
CTACGTCCATGTTACTCCAGGTATGCCACTACCTCTCATAGGGAATTGATGTTCTAACACGACAACAGTATACGACCAAGTTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGGTGACCCCGCCTTCACCAACCCCGACCGTGACCTCGCGCGTCGGAGAGGTCCTCTACGCGACTCTGAACGACTCGTTTGACACTGCCATTCATGCTGTCGACGAGATTTATACC
GCAAACGCTACCATGCCCGGCGCCAGAGACGTGGATGAAGATTACGACAATGGTCCCCAAAGTCCTATTGCAAAGAGCTTGTATGGCGCCAAAAACGAACTCAACAGGTGGCGGGGCAAA
AGTCCCCCTCTCCCAAGCTTCGAAATCGTCAGTGGACTCGTCGACGCAGGCCTCAACAAGGGTAGCATAGATGACCGGAAACTCTTGCTCGAAGCTGCCCTGTCAACAATGTCTTCGCTC
CCCAAAGGTGCTCTCTCAGATACGCTTAACAGAAAGACGGTCGCCCTTCTCTATCGTGATTTACCTCACCCGCCGCCGACGTTTATAAACAACCAATACGCATGGCGACAACCCGATGGT
TCGCACAACAATCCGGCGAACCCCGACCTCGGCAAGGCAGGGATGCCCTATGCACGCAACGTGCAGTCCCATACCCCAATGCCCATGAGCGAGCAGCCCGATCCTGGCCTCATCTTCGAT
TCGCTCCTCAGGAGGGACCGTTTCAGGCCCCATCCAGCCGGCAACTCTGCCCTTCTTTTCGGTTTCGCGACGCTTGTCATTCATACTTGCTTCCGCACCAATCACGGTGACTGGACGATC
AACGATACCTCGTCCTACGTCGATCTCTCGCCACTCTACGGCAACTCCCTCGAGGGTCAGTTGAAGCTTCGTAGACAAGATGGTACCGGAAAGATGTGGAACGACGTCTTCGCCGAGGAT
AGGCTCCTTTTCCTCCCGCCTATCAGCTGTGCACTTCTCGTTCTCTTCTGCAGAAACCACAACTATATCGCCCAGAAGCTCCTCGAGATCAATGAGAAGGGTCGTTGGAAGTGCCCGCCA
CCCGACGATGAGCAGGCTCGCATGACCCAAGACGACGAAATCTTCAATATTGCCCGTCTCATCAATTGTGGACACTTTGCTGGCATTGTCTTCAGCGACTATCTTGCAGGCATTCTCGGG
CTATCCCACGATGCTAATCCCTGGTCCCTGGATCCCTTCTCCGAGATTCGTAATGAGGACCACACCATTGTCGAGCGTGGTTGCGGTAACGCGAACAGCGTCGAGTTCAACCTTCTCTAT
CGCTGGCACGCCACCCTTTCCGAGCCAGACGTCGCTTGGGTTGAGCGCATATTCGCGTCGAGCTTTGCTGGAAAGTCTGCCGAGGAAATCACCATCCGTGATTTCAACCAGGTCACAGAA
AATCTTAGAGAGGCCTCTAGGAGAGACATCAAGACGTGGACGTTTGCTGGTCTGCACCGCGGGGAAGATGGGAAATTCCACGACTCTGATATTGCCAAAATCCTCATGGATGCCACCTCC
CACCCAGCAGGCGCGTTTGGTGCTCGCCATACACCAGGTATCATGCGCACGATTGAGATCATGACTATCCAAATGGCTCGAAAGTGGGGTGTATGCACGCTCAACGAGTTCAGGAAGAGT
CTTGGCTTGAAGCCGTACACTACGTTCCAGGAGTGGAATCCAGATCCAGCCATCTGGATGCCCGCTCAGGCTCTCTATGAGCAAGTGGACAGGCTCGAGCTCTATGTCGGTCTTCAGGCA
GAGGATACTAAGAAGCCTGGGCCTGGTGCCGGTTTGTGCCCAGGATACACAATCTCTAGGGCTATTCTCGCGGATGCCATCGCGTTGACTCGTGGAGATCGATTCTACACTTACGATTTC
ACCCCATCGACCTATACTTCTTGGGGTTACAAGGATTGCCAGCGCGATCCCACGAACCCTGGTGCTGGATCTGTTCTTGGTCCGCTCTTCCTTCGCACGCTGCCGAACAACTACCGCCCA
GACTCCGTCTTCACGTGGTTCCCGATGCTTACCCCCGAAGCTACGCGAAAGAACCTCACCCGCCTTGGCAAGGCGGACAAGTATACTTTTGAGCGACCCGGAGAATTGAGCATGATCAAA
TCCGTCGAAGACGTCGGCGCAGTTATGGACTACACTACCGGTCGCGGATCAAGGGTTGTCAGGAGCGTGTATGGACCCAAGGCGCGCGAGATCATGGATGGTGGCGGGTACTTTGTACTT
TTGGATGACGTCCGAGCAGACATGCACCGTCGCGCAATTCAGCAAGCCATTTTCCACAATGTCGAGCACACTGGTCCGATCGCCCGCGCAATCGAGTCCAAGATGCGTGCTCTTATTCAC
CACAAGAGTTTCGAGCTCGTCAAGGGCAAGACAAAATGCATCGACATTGTCAAGGACGTTGTCAACCTGGCACCCATTCATTGGATCGCCGACGCCCTCGGTCTTCCTCTCAAGACACAT
GATCACATGAAGGGAACCATCTTCGAGCAGCAAGCTGATCAAATCTTCAAGGATATTTACTCGTACATCTTCCACGAGATTGACCCCTCGCTCTTGGTCAACTTCCGTGGGATTGTCAAG
AAGCATGTCAGCTTTATGATGCGCTACATCGAGCCTCAAGTACAGGATTCGAATGGCATCATCCCCAGCGTTGCGGCAATCAAGGACGCTATCGTTGGCATCTGGGTCGACCGTCGTGGA
GACTGCGGTCGCTTCTACGATTCCATGGTAGCCAATGGCTTCTCTAGGACCGACGTCATGAACGATGTGCTTGCGCTTGCCGTTCTGGCCACAGTCGAACTTTCTCACTTGCTCGTTCAT
GTGATCAACTTCTATCTCGAAGAGGAGAACAAGGAATATCGTGATCGCATCACTGCCGCCGCCTTTGGCGACGAGACTGTCACAGCTGCAGAGCTCGAGGGATATGTGCGCGAAGCGATT
CGCTTGGATCCTGTCACTGTTGGCGTCATGCGCGAGATTACGACGGGTACTTTATCTCAGGCCAGTGGGCAACCATTGCAAGCCAACGAGCGCATATTTGTCAGCTTGAAGAAGGCCATG
GTCAACGAGGACCTCTACCCTCATCCCAAGTCCGTTGATCTCCATAGGTCCAAGGAGCAAAAACTTCTGCTGGGTGACGGAACCTCCAAGCTGCTCGGCGAGGATTATATCCTCGACGTC
GGTGCTCACGTCCTCAAGGCCGTCTTCAGTCTCAAGAACCTCCGCCGTGCGCCCGGACCGTCTGGAACACTTCGTCGATATGTCCAAGATCACAATGGTACGAAGCAGTACTTCTATCTC
GACCAAAAGCAAAAGATCAGCCCATGGCCTACGTCCATGTTACTCCAGTACGACCAAGTTTGA

Retrieve as FASTA