Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
267 (562) |
| PWM (Da): |
27667.47 (61586.6) |
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| PI (pH): |
5.62 (4.73) |
Peptide Signal: |
cut: 30 range:30-591 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
VSSAVKSEAR MGASLLRLHF HDCFxNGCDA SVLLDDTANF TGEKTATPxA NSLRGFDVID TIKSQLESAC PGVVSCADLL TVAARDSVVA VSGPSWTVPL GRRDSTTASQ SAANSNIPAP
TLNLSGLITA FSNKGFTTKE MVALSGSHTI GQARCTTFRA RLYNENNINT TFATSLKANC PSSGGDNNLS PLDTTSPTSF DNAYFKNLQI QEGLLHSDQQ LFSGGSTDAQ VNAYSSNSAT
FMTDFANAMV KMGNLSPLTG SSGQIRK
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Retrieve as FASTA
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| Remarks |
Partial sequence from NGS. Two ends and PS are missing due to NNNN. No EST. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTGAGCTCTG CGGTCAAAAG TGAGGCCCGC ATGGGCGCAT CGCTGCTCCG CCTTCATTTC CACGATTGCT TCGnTAATGC AAGTCCCTCT GCCCGGAGTC TCTCCTCTCT TTCCGATTGA
TTGCTACCTT TGTTTCTCTG TGAAACGTTC CAACCGACCT CATAATCAAA AAGAATGATn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn AACAGCAATA AAAAGCATGG CCCTTAGAAT AAAAGCATTT CTTTTTGGTG ATTCAAAGAA AAAAATTTCA TGAGTAATTC TAGTATACAC CGCTAGTGTA AAAATCTCAT
TCCGTAAGTG GTCTTATCCA CTAAATATTn nnnnnnnnnn nnnnnGATTT GGTAATTAGA ATCCTCAAAT CAAGATGGAC AAGACTGTTG TTGTGCGTGC TCTAATTTTT TTTTTTCATT
TATTAAATTG ATAATGTATT CTATAACTTC ATTACAAAAG CCATGCAGGC GAGCGTATTT TATGGCGAGT ATGTTGTGGT TGTGGATAAG ACGTGTGTAT GTATCATTAG CTACATGATT
TTAATTCGAT GAATTAGATC ACGCAAAAGT CCCAAACGTT GGAGATGGCC AAAAGAGAGA GCGACAGCCT TGCTTTTATG ACGGTGGTTG ACTTTACGCG TTTATCATGT TTGGCAAATC
AATCAGTTGT TTTCAATAGG TTTTGGTAAT ATTTTGATCA CCGTCACTTT GGTTGCCATA CTTTTCTACA TTAAAAATGA TATTTTGCCA TAAAATATCT TTTTTTAATG AAATTTGTTA
GTCCAATGGT GTTCTAAAAA TTGTATTAGA TCTTTTGAAC AAAACAAAAA GTGCCTTGTG CATGGCCTCA CTACTTTGCT TCCAACACAA ATTTAGAGTG TCAATCTAAA TTAACTAATA
AATTTGAAGT ACCTTCACTA TTATCCACTT CGTGTTCTTT GTGCATAATT CAAGAGTTGT CCATATCCTA ACGGGCCTTT CTCCATCAAA CATGTCGTCT CTATTTTGAG CTTGATATTT
AAAGCCTGAT TCTTTTTTTA CTAACAAATG TGACATGTTT ATAACTTTCT CGATTAGATG CATTTCTCTT TTCCTGTATG GATTATTGAT TGTCTAGATC TTCGAGGTCA TTCAAGTAGA
CATAATTCAG GTTAATTTTA GTAAATCAAA AAGTCGGTGA CTCCCCTCTG TTAAATATTA AAGGACACGG CATGTTGCTG ACCAAAAGCC TTGATTTAGA GAACACTTGA GAGCACAATC
ATTTTGTTTC TAGTCCGACA ATTATTGGAT GCATTGTTCC TAGAGAGACA ACACAAATTA AAGTCAAAAG GCATGAGAAA GAGTGTCATT TCCGTCCAAA CTGGTGTCTG TGGGCGTTCA
TAACGGGGGA CAAAAAGGGG GAATATGATA AGGGAAATTA ATCAGTGTTC ATACTTTATG TTCAGGAAAA AGTTACAGCA CTTGTTCTGT TTATATTTTG ACCGTCGAAT CTAATGAAGG
CAGTAGGATT GATTTGACTG ATTAACGATG TGTGGCACAA AACATAATAT AGGGATGCGA CGCATCTGTT TTGTTGGATG ACACCGCGAA CTTCACTGGG GAGAAGACTG CTACCCCAnA
TGCCAATTCC TTACGGGGAT TTGATGTGAT TGACACGATC AAGTCCCAAT TGGAGAGCGC ATGCCCCGGT GTTGTGTCCT GCGCTGATCT CTTGACTGTG GCTGCCCGAG ATTCCGTCGT
CGCTGTAAGC GCACACTTTC TTCTTAATTC TAGTGATCAA TTGTGATGAG AAAAAATCAC TCGTTATGAT CTCGATGCTG CATCAATACT CACACGTGTG GATTTGTTTA ACTATTTAAT
TCTTAGTTAG GTGGCCCAAG TTGGACAGTC CCGCTAGGAA GAAGAGACTC AACCACTGCA AGCCAAAGTG CTGCTAATAG CAACATCCCT GCCCCGACTT TGAACCTTAG CGGCCTCATC
ACTGCCTTCT CTAACAAAGG TTTCACCACC AAAGAAATGG TGGCACTCTC AGGTCATTGT TTTTCCTTTT TTGTGGCACC TTTTAATAAC GAATTTACAA TAATGTTTGA TCGATATACT
AAGATTAATA TTAAGAAGTT GTTCGATTGT TGTTAATAGG GTCGCACACG ATAGGTCAAG CCCGATGCAC AACTTTCCGG GCCCGTCTTT ACAACGAGAA CAACATCAAC ACCACGTTCG
CAACCTCGCT CAAGGCGAAC TGCCCAAGCT CCGGAGGTGA CAACAATCTC TCTCCTCTAG ACACCACGAG CCCGACGTCC TTTGACAATG CCTACTTTAA GAACTTGCAA ATCCAAGAAG
GTCTTCTTCA CTCGGACCAG CAATTGTTTA GTGGTGGTTC CACGGACGCT CAAGTGAACG CTTATAGCAG CAATTCAGCT ACTTTCATGA CAGATTTTGC TAACGCCATG GTGAAGATGG
GTAACCTCAG CCCGCTCACC GGCTCAAGCG GTCAGATTAG GAAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTGAGCTCTG CGGTCAAAAG TGAGGCCCGC ATGGGCGCAT CGCTGCTCCG CCTTCATTTC CACGATTGCT TCGnTAATGG ATGCGACGCA TCTGTTTTGT TGGATGACAC CGCGAACTTC
ACTGGGGAGA AGACTGCTAC CCCAnATGCC AATTCCTTAC GGGGATTTGA TGTGATTGAC ACGATCAAGT CCCAATTGGA GAGCGCATGC CCCGGTGTTG TGTCCTGCGC TGATCTCTTG
ACTGTGGCTG CCCGAGATTC CGTCGTCGCT GTAAGTGGCC CAAGTTGGAC AGTCCCGCTA GGAAGAAGAG ACTCAACCAC TGCAAGCCAA AGTGCTGCTA ATAGCAACAT CCCTGCCCCG
ACTTTGAACC TTAGCGGCCT CATCACTGCC TTCTCTAACA AAGGTTTCAC CACCAAAGAA ATGGTGGCAC TCTCAGGGTC GCACACGATA GGTCAAGCCC GATGCACAAC TTTCCGGGCC
CGTCTTTACA ACGAGAACAA CATCAACACC ACGTTCGCAA CCTCGCTCAA GGCGAACTGC CCAAGCTCCG GAGGTGACAA CAATCTCTCT CCTCTAGACA CCACGAGCCC GACGTCCTTT
GACAATGCCT ACTTTAAGAA CTTGCAAATC CAAGAAGGTC TTCTTCACTC GGACCAGCAA TTGTTTAGTG GTGGTTCCAC GGACGCTCAA GTGAACGCTT ATAGCAGCAA TTCAGCTACT
TTCATGACAG ATTTTGCTAA CGCCATGGTG AAGATGGGTA ACCTCAGCCC GCTCACCGGC TCAAGCGGTC AGATTAGGAA G
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Retrieve as FASTA
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