Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
322 (294) |
PWM (Da): |
33856.34 (31093.9) |
Transmb domain: |
i13-35o |
PI (pH): |
6.49 (6.23) |
Peptide Signal: |
cut: 29 range:29-322 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MACENSSPRx xRPAFLLLLC FLLGTASARL SSTFYSTSCP SALHTIKSGV SSAVSSEASM DGSLLRLHFH DCFVNGCDAS ILLDDTMNFT GEKTADANDN SIHGYEVIDK IKSQLESSCP
GVVSCADILA VAARDSVVAL GGPSWTVLLG RRDSTTASLS AANSDLPAST LSLSDLITAF SNKGFTAKEM VALSGSHTIG QARCTTFRTR LYNESDINSM YATSLKANCQ SSGGDNNLSP
LDTMSPTYFD NAYFKNLQTQ KGLLHSDQQL FSGGSTDAQV NMYSSNSATF MTDFANAMVK MGNLSPLTGS SGQIRKNCRK VN
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from NGS (3 introns). |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTGCG AGAACTCTTC TCCCAGACnn nCCAGACCCG CCTTCTTATT GTTGCTGTGT TTCCTACTTG GAACAGCCTC GGCTCGGCTG TCCAGCACTT TCTACTCCAC ATCCTGTCCC
AGCGCCCTCC ACACCATTAA GTCCGGCGTG AGCTCCGCAG TGTCCAGCGA GGCCAGCATG GACGGGTCGC TGCTCCGCCT TCACTTCCAC GATTGCTTCG TCAATGCAAG TCCCTCTCCT
CCGAGTCTCT CCTCTCTTTC ACATTGATTT CTACCTTTGT TTGTCTTCTG TCGTTCAAGC TGCATGCAAG CGTGCGTGCA TGATGCATCT TTATGCCTGT GCTTGTGAAA CATTCCAGCC
ACCCTCATAG TCAAAGGCAT CATTAGATTT CGCTTCTACG CATTAATGTA CGCTCTTTTT CGCTAACCAA AACAGTAGGT ACGAGATTCG CATAATGAAT TAGTCGAGTC TGACTGACCT
TTTTGGTATA TTGTTGGGCC ATGCATTTTT GTGAGTTTAC CAAGGGTGGA CAAGAATGTT GTTGTGTATA CTCTAATTTT TTTTATTACA CAGACAATAT ATGCTATATT TTTCTCTATT
ATAAAACCAT GCAGGCGAAC GTACTTTATG CTGATCATGC TGTTGATAAG ATGTGCGTGT ATGATTAGCT ACCTGTTTTA AACCCGATGA ACTCGATGAT TTAGATCATG CAAAGGTCCT
AAACGTTGCA GCTGGAAAAA GAGAGAGAGA GACGGCCATG CTTTTTAAGT CAAATAGGCG TTTATCACGT TTGGCAAAAC CAATCAGTCT TCCTCAATAG GTTTCAATCA TATTTTGATC
ACCATCCCTT TGGTTGCCAT GCTTTTCTAA ATTTAAAATG ATATTTTATG GTAAAATATC AGTTTTAATG GAATTTCTTA ATCCAATGGT ATTCTAAAAA TCATATTAGA TCTTTGAATA
AATGAATTGC ACCTTGTGCA TGGCCTCACT AGTTTGCTTC CAACACAAAT TTAGAGTGTC AATCTAAATT AACTAATTGA TTTAGTGTAC CTTCTTTGTG TTCGTTCTAC TTTGATCTTG
ATAGTCAAAG GCTGATCGAT TTTTTAAATA ACAAATATGA CATGTTTACA ATTTTCTCGA TTAGATTTGT GGGTTGCTTT TCTTTTTCCT ATATAGGTTG GAAATCATCT AGATTTTCAT
TCTTAATTGA TACATAATTG GTCATTCGAG AAGGCCAAGC TCAGGCTAAT TCTAGTGAAT CATAAAGTCG GTTACTCCCC TCTGTTAAAT ATTAAAGAAC GTGCCATGTT GCTAACCAAA
AATCTTGATT TAGAGAACAC TTCACAGCGC AATCATTTTG TTTCTAGTCC GACGATTATT GGATGCATTG TTCCATGAGA AACAACTCGG AGTAAAGTCA AAAGGCATGA GAAAGAGTGT
CACCCCCGTC CAAACTGGTG TCTGAAGTCG TTCATAGTAG GGGACAAAAA GGGGGAATGA TAAGGGAAAC AACCAGTGTT TATGCTCTAA TTTCAGGAAA ATTTACAACA CCCAAACCTC
CTGTCTCCAA CCAACCAATG AATGAAATGA ACGCCAATCG GATCGATTTT CCAACTAGAA TGGCTGATTA ATAATGTGTG GTGCAAAATA TGAAACAGGG ATGTGACGCG TCGATTTTGT
TGGATGACAC CATGAACTTC ACCGGGGAGA AGACCGCCGA CGCGAATGAC AATTCCATAC ATGGATACGA GGTGATCGAC AAAATCAAGT CCCAACTGGA GAGCAGCTGC CCTGGGGTCG
TGTCCTGTGC TGACATCTTG GCCGTCGCCG CGCGTGATTC TGTTGTTGCC GTAAGTGCAC ATTTTCTTCT CAACACTAGC GATCAATTGG GAGGAAAAAA TCACATGCTA TGTTACCTTT
CTATATTAGC ACTAACATGT TTGGATTTAT TTGTTTATTT AATTTTCAGT TAGGTGGCCC AAGTTGGACA GTCTTATTAG GAAGAAGAGA CTCGACCACC GCAAGCCTAA GTGCTGCTAA
TAGCGACCTT CCTGCCTCAA CTTTGAGCCT TAGCGACCTC ATCACCGCCT TCTCTAACAA AGGCTTCACT GCCAAAGAAA TGGTGGCACT TTCAGGTCTn nnnnnnTTTT TTGGTTGCAT
TTTATAATAA AGAATTATAA TAAAGCTCGA CTGATTTACT AAGATCGATT TACAAAAACT GTTCAATTGT TGTCAATAGG ATCGCACACG ATAGGTCAAG CCCGATGCAC AACTTTCCGG
ACCCGACTTT ATAATGAGAG CGACATCAAC AGCATGTACG CAACGTCACT AAAAGCAAAC TGCCAGAGCT CCGGAGGTGA CAACAATCTC TCTCCTCTCG ACACCATGAG CCCGACATAC
TTTGACAACG CCTACTTCAA GAACTTGCAG ACCCAAAAGG GGCTTCTTCA CTCGGACCAG CAATTGTTCA GTGGTGGTTC CACGGACGCT CAAGTGAACA TGTACAGTAG CAATTCGGCT
ACTTTCATGA CAGATTTTGC TAACGCCATG GTGAAGATGG GTAACCTCAG CCCACTCACC GGCTCAAGCG GTCAGATTAG GAAGAACTGC AGGAAAGTCA ACTGA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTGCG AGAACTCTTC TCCCAGACnn nCCAGACCCG CCTTCTTATT GTTGCTGTGT TTCCTACTTG GAACAGCCTC GGCTCGGCTG TCCAGCACTT TCTACTCCAC ATCCTGTCCC
AGCGCCCTCC ACACCATTAA GTCCGGCGTG AGCTCCGCAG TGTCCAGCGA GGCCAGCATG GACGGGTCGC TGCTCCGCCT TCACTTCCAC GATTGCTTCG TCAATGGATG TGACGCGTCG
ATTTTGTTGG ATGACACCAT GAACTTCACC GGGGAGAAGA CCGCCGACGC GAATGACAAT TCCATACATG GATACGAGGT GATCGACAAA ATCAAGTCCC AACTGGAGAG CAGCTGCCCT
GGGGTCGTGT CCTGTGCTGA CATCTTGGCC GTCGCCGCGC GTGATTCTGT TGTTGCCTTA GGTGGCCCAA GTTGGACAGT CTTATTAGGA AGAAGAGACT CGACCACCGC AAGCCTAAGT
GCTGCTAATA GCGACCTTCC TGCCTCAACT TTGAGCCTTA GCGACCTCAT CACCGCCTTC TCTAACAAAG GCTTCACTGC CAAAGAAATG GTGGCACTTT CAGGATCGCA CACGATAGGT
CAAGCCCGAT GCACAACTTT CCGGACCCGA CTTTATAATG AGAGCGACAT CAACAGCATG TACGCAACGT CACTAAAAGC AAACTGCCAG AGCTCCGGAG GTGACAACAA TCTCTCTCCT
CTCGACACCA TGAGCCCGAC ATACTTTGAC AACGCCTACT TCAAGAACTT GCAGACCCAA AAGGGGCTTC TTCACTCGGA CCAGCAATTG TTCAGTGGTG GTTCCACGGA CGCTCAAGTG
AACATGTACA GTAGCAATTC GGCTACTTTC ATGACAGATT TTGCTAACGC CATGGTGAAG ATGGGTAACC TCAGCCCACT CACCGGCTCA AGCGGTCAGA TTAGGAAGAA CTGCAGGAAA
GTCAACTGA
|
Retrieve as FASTA
|
|