Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
325 (303) |
PWM (Da): |
35548.06 (33068.8) |
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PI (pH): |
9.32 (9.29) |
Peptide Signal: |
cut: 23 range:23-325 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MEARRFLVSC LSFALLLSAV SAQLRTDFYK NTCPNVESLV RSAVTKKFQQ TFVTAPATLR LLFHDCFVRG CDASVLIASP TNNAEKDHPD DLSLAGDGFD TVIKAKAAVD SVPQCKNKVS
CADILALATR DVVSLAGGPF YSVELGRRDG RISTKLGVQH NLPQPGSKLD QLNSMFSSHG LSQTDMIALS GAHTIGFSHC GKFSKRIYNF SPRSSIDPTL NFRYALQLRQ MCPINVDPRI
AINMDPTTPQ TFDNAYYKNL QQGKGLFVSD QTLFSDPRSR ATVNLFASNN AAFQQAFVTA ITKMGRIGVK TGNQGEIRID CTRPN*
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Retrieve as FASTA
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Remarks |
Complete sequence from NGS . |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGGCTC GTAGGTTTCT CGTGTCGTGC CTGAGCTTTG CCCTTCTGTT GAGTGCAGTC TCGGCTCAGC TCAGGACGGA TTTCTACAAG AACACGTGCC CGAACGTCGA GTCCCTCGTC
CGGTCGGCCG TGACCAAGAA GTTCCAGCAG ACCTTCGTCA CCGCCCCTGC AACTCTCCGC CTCTTGTTCC ACGATTGCTT CGTCAGGGTT GGTTTTGAAA CAAAGTATTC TATACATAAT
AATnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnGCTC ATAGCGTCGC CCACCAACAA TGCCGAGAAA
GACCATCCCG ATGACCTGTC GCTCGCCGGC GACGGGTTCG ACACTGTGAT CAAAGCTAAG GCAGCAGTGG ATAGTGTTCC TCAGTGCAAA AACAAAGTCT CTTGTGCCGA TATCTTGGCT
CTTGCCACTA GAGATGTCGT TTCGTTGGTA CGATAGGGGC CCTCCACTAA ACTCCTTTCC CAACTTTTTC ATTTCACGAA ATCGAGCATC CATCTAACTT TTTCAGTCCG GTGAAAAGCG
AACCATTCAT ATTGAGCTCG AAAATTTATG AAAAATTACT TTAGAGGCAC GTAGTTTTCG AACCCTTATA GAGTGCTCGA CTACTTTCTT AGAATnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnTGACGA AATTATAATA TGCTTTTGTT TTGTATGAAA GAAAAATAAT AGTCTAATCA GATAAACTTT TTAGTACAAA TTTCTTTTCT TGTTACACTG AAAATCCATT GGGTCCCTTT
CATAATGGCT GTCCTTTTCT CCCTCCTCCA CATCAATAGC ATGTATGGAA GTTTGATGCA ACGGGTTAAC AAGAAAGTCG ACAACAAGCA CCACAACAAG CACCAACCAA CGCTACTTTT
TCCTGTCAAA CCACTCAAAA TTGCGATTAA TTTTCGTCCA TTTTATTCTT TTCATTTTAG CAAATTGATA ATGTCGCACG GTCATTTCAT AATCACTTGC TATTCTTTGC AAAATTCTGA
AATTTTGTGT AGGCAGGGGG GCCGTTCTAT AGTGTTGAAT TGGGGAGACG CGATGGAAGA ATATCAACTA AACTTGGTGT TCAACACAAT CTTCCTCAGC CTGGTTCCAA ATTGGACCAG
CTCAATTCTA TGTTCTCTTC TCATGGTCTC TCCCAAACTG AYATGATCGC CTTATCAGGT AATTAATTAC ATCTTATTAT GAGATTTGGT GGATTACTAA GCAAATAGAT CAAGAGGCCA
TATAATTACA TGCTAAnnnn nnnnnnnnnn nnTTTACTTA ATCATTTTGA ACCCTCAAAG CCATTCTTTT CGAAGAATTG TTTCAAAGCG TGACACAGAA TTCTAAATnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn ATCATAGCTC AGATGATTGT AGTCTAATGT TAATCATAGT CCAATCATAC TCTCTTTCAT GATAGAATAG CATATGTAAC TATTAAGCCG GTAGTCATCG
ACAAGTTCAC AAAATTATTC AATTTCAAAC Gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnACC ACTGCGTTTG TAGGCGCGCA CACGATTGGA TTCTCTCACT GCGGCAAATT
CTCCAAGCGG ATCTACAACT TCAGCCCGAG AAGCTCGATC GATCCGACCC TGAACTTCCG CTACGCCTTG CAGCTGAGGC AGATGTGCCC GATCAACGTG GACCCCCGGA TCGCCATCAA
CATGGACCCC ACAACGCCTC AGACGTTCGA CAACGCCTAC TACAAGAACC TCCAACAAGG AAAGGGCCTC TTCGTCTCCG ACCAGACATT GTTCTCCGAC CCGAGGTCGA GGGCCACGGT
CAACCTGTTC GCATCAAACA ACGCGGCGTT CCAACAGGCC TTCGTCRCTG CGATCACAAA GATGGGTCGG ATCGGGGTCA AGACTGGGAA CCAGGGCGAG ATTAGGATTG ATTGCACTCG
CCCTAACTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGGCTC GTAGGTTTCT CGTGTCGTGC CTGAGCTTTG CCCTTCTGTT GAGTGCAGTC TCGGCTCAGC TCAGGACGGA TTTCTACAAG AACACGTGCC CGAACGTCGA GTCCCTCGTC
CGGTCGGCCG TGACCAAGAA GTTCCAGCAG ACCTTCGTCA CCGCCCCTGC AACTCTCCGC CTCTTGTTCC ACGATTGCTT CGTCAGGnnn nnnnnnnnnn nnnnnCTCAT AGCGTCGCCC
ACCAACAATG CCGAGAAAGA CCATCCCGAT GACCTGTCGC TCGCCGGCGA CGGGTTCGAC ACTGTGATCA AAGCTAAGGC AGCAGTGGAT AGTGTTCCTC AGTGCAAAAA CAAAGTCTCT
TGTGCCGATA TCTTGGCTCT TGCCACTAGA GATGTCGTTT CGTTGGCAGG GGGGCCGTTC TATAGTGTTG AATTGGGGAG ACGCGATGGA AGAATATCAA CTAAACTTGG TGTTCAACAC
AATCTTCCTC AGCCTGGTTC CAAATTGGAC CAGCTCAATT CTATGTTCTC TTCTCATGGT CTCTCCCAAA CTGACATGAT CGCCTTATCA GGCGCGCACA CGATTGGATT CTCTCACTGC
GGCAAATTCT CCAAGCGGAT CTACAACTTC AGCCCGAGAA GCTCGATCGA TCCGACCCTG AACTTCCGCT ACGCCTTGCA GCTGAGGCAG ATGTGCCCGA TCAACGTGGA CCCCCGGATC
GCCATCAACA TGGACCCCAC AACGCCTCAG ACGTTCGACA ACGCCTACTA CAAGAACCTC CAACAAGGAA AGGGCCTCTT CGTCTCCGAC CAGACATTGT TCTCCGACCC GAGGTCGAGG
GCCACGGTCA ACCTGTTCGC ATCAAACAAC GCGGCGTTCC AACAGGCCTT CGTCCCTGCG ATCACAAAGA TGGGTCGGAT CGGGGTCAAG ACTGGGAACC AGGGCGAGAT TAGGATTGAT
TGCACTCGCC CTAACTAG
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Retrieve as FASTA
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