Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
326 (299) |
PWM (Da): |
35330.11 (32315.5) |
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PI (pH): |
8.47 (8.65) |
Peptide Signal: |
cut: 28 range:28-326 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MACPKLFLSC LLLQLMFLFL VPEVAHGQGL KVGFYQKTCP NAEAIVKKVM DQVMSVAPSL SGPLLRMHFH DCFVRGCEGS ILLNSSTNQA EKDAPPNFSL RGYQVIDRVK TALEKACPGT
VSCADVLAIV ARDVVVATGA LSYDVETGRR DGNVSSLNEA LNNLVPPNAN ITTLKADFAM KGLSVKDLVV LSGNFTGKGD TDPKLDSNYI ARLKLKCKPN DQTTLVEMDP GSVRTFDIKY
FDLIPKRRGL FTSDAALLDD SETKAYIDLQ IKTGGSTFFK DFGVSMVNMG RIGVLTGTAG EVRKVCAKVN xKSTRRMHDE AWNNWK
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Retrieve as FASTA
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Remarks |
Partial sequence from NGS. PS is missing due to NNNN. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTGTC CGAAGCTCTT CTTGTCTTGT TTGTTGCTTC AGTTGATGTT CTTGTTCCTT GTCCCTGAGG TCGCTCATGG TCAGGGTCTC AAAGTAGGGT TTTACCAGAA GACATGCCCA
AATGCAGAGG CCATCGTGAA GAAGGTCATG GATCAAGTCA TGTCCGTCGC CCCGAGTCTC TCTGGCCCTC TCTTGAGGAT GCATTTTCAC GACTGTTTCG TTAGGGTAAG TGAATGAATG
AGTGCACGTA CTTCTCTTCC TACTTGTGCT TGGGAAGAGT ACTATCTTAT GAGCACCTGT ATAATGACTG AAGAGAATGG TTTTTACTTT CGTCGAACCA TCTGCTAAAC ATCAATTAGA
ACAGGTTATA ATCTAACGAA TGGTGTTTAG CCCCTCAACR TACTTTCCTA GATTCATCCG TGGATACGAA CTGTTTTCTG CATGAACTCA CAGTCGAATA GTGTTTCTTT CTGGGTTTTT
CCACAGGGTT GCGAAGGTTC AATACTCTTG AACTCTTCGA CCAATCAAGC CGAGAAGGAC GCGCCACCGA ATTTCAGCCT TCGCGGTTAC CAGGTGATCG ATAGAGTCAA AACGGCGTTG
GAGAAGGCAT GTCCCGGCAC CGTTTCRTGT GCTGACGTCT TGGCCATCGT CGCAAGAGAT GTCGTCGTCG CGGTGCGYAT ATGCATATGT CACTTGCATT ATTTATTCAT TCTAATTTTA
ATGTTCCTCA TTTACATATG ACATCAGTAG AAATCTCGAT TTTCACAAAC AATCCATCCC CTCTCATTGG AAAAAAAATT CCGCCCATAC GTATCTTCGG ATCTAATTAC TGCTTGTCAA
AACCGAGATT ATTTTTGCAT CGTGCATCAT GAAACTCAAT GATTTTTCCA TCAGAGAAAA ACATATTTAT ATAGGAATTG GGTTTCTTTT TGTTGTCACT TTAGACCGGA GCACTTTCCT
ATGATGTGGA AACTGGACGA AGAGATGGGA ACGTCTCTAG TTTAAACGAG GCGCTTAACA ACTTAGTACC ACCTAATGCC AACATTACAA CTCTGAAAGC AGATTTTGCA ATGAAGGGCC
TCAGTGTGAA GGACCTTGTC GTCCTATCAG GTAACACTTA ATCTTCAATT GCTTCATATG CTTTATCGAT TATTTTGTGG AAATTGACAT AGATTAATAG GAAGAAACTA TAATTTGAGC
ACGAGATTCA TAAACAGTCT GCACTGCAAG GAGAAAACGT AATTTGTAAA GTCAGATCAT GCTAATTCTG ATTTCTGTTG ACTAGGTGGC nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnACAA CTTCACCGGA AAGGGCGACA CCGACCCCAA GCTCGACTCT AACTACATAG CAAGACTGAA GCTCAAGTGC AAGCCGAATG ACCAAACCAC CCTCGTTGAG
ATGGACCCAG GAAGCGTGAG GACGTTCGAC ATCAAATACT TCGATCTGAT CCCGAAGAGA AGAGGACTCT TCACTTCGGA CGCCGCACTT CTTGATGATA GCGAAACCAA GGCGTACATT
GACCTCCAGA TCAAGACCGG TGGATCCACC TTCTTCAAGG ACTTTGGAGT GTCAATGGTG AACATGGGTC GGATCGGCGT GCTCACCGGA ACGGCTGGTG AAGTCAGGAA AGTGTGTGCA
AAGGTTAATT nAAAGTCTAC GAGGAGGATG CATGATGAAG CATGGAATAA TTGGAAGTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTGTC CGAAGCTCTT CTTGTCTTGT TTGTTGCTTC AGTTGATGTT CTTGTTCCTT GTCCCTGAGG TCGCTCATGG TCAGGGTCTC AAAGTAGGGT TTTACCAGAA GACATGCCCA
AATGCAGAGG CCATCGTGAA GAAGGTCATG GATCAAGTCA TGTCCGTCGC CCCGAGTCTC TCTGGCCCTC TCTTGAGGAT GCATTTTCAC GACTGTTTCG TTAGGGGTTG CGAAGGTTCA
ATACTCTTGA ACTCTTCGAC CAATCAAGCC GAGAAGGACG CGCCACCGAA TTTCAGCCTT CGCGGTTACC AGGTGATCGA TAGAGTCAAA ACGGCGTTGG AGAAGGCATG TCCCGGCACC
GTTTCCTGTG CTGACGTCTT GGCCATCGTC GCAAGAGATG TCGTCGTCGC GACCGGAGCA CTTTCCTATG ATGTGGAAAC TGGACGAAGA GATGGGAACG TCTCTAGTTT AAACGAGGCG
CTTAACAACT TAGTACCACC TAATGCCAAC ATTACAACTC TGAAAGCAGA TTTTGCAATG AAGGGCCTCA GTGTGAAGGA CCTTGTCGTC CTATCAGGAG AAAACGGCGA CACCGACCCC
AAGCTCGACT CTAACTACAT AGCAAGACTG AAGCTCAAGT GCAAGCCGAA TGACCAAACC ACCCTCGTTG AGATGGACCC AGGAAGCGTG AGGACGTTCG ACATCAAATA CTTCGATCTG
ATCCCGAAGA GAAGAGGACT CTTCACTTCG GACGCCGCAC TTCTTGATGA TAGCGAAACC AAGGCGTACA TTGACCTCCA GATCAAGACC GGTGGATCCA CCTTCTTCAA GGACTTTGGA
GTGTCAATGG TGAACATGGG TCGGATCGGC GTGCTCACCG GAACGGCTGG TGAAGTCAGG AAAGTGTGTG CAAAG
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Retrieve as FASTA
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