Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
270 (248) |
| PWM (Da): |
28604.31 (26352.0) |
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| PI (pH): |
6.85 (7.14) |
Peptide Signal: |
cut: 23 range:23-270 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASLVALVSA FLILQILSPV DALSTNYYDH TCPQLEATVT AAVKQAMMND KTVPAALLRM HFHDCFIRGC DGSVLLNSTG GNTAEKDGPP NISLHAFYVI DNAKKAVEAL CPGVVSCADI
LALAARDAVA LSGGPTWNVP KGRLDGRTSK ASDTRQLPAP IFNISQLQQS FSQRGLSMED LVALSGGHTL GFAHCSSFQN RIHNFSPTTD VDPSLSPSFA ANLRNVCPLG NTAKNAGSTL
DSTTTTFDNV YFKMLRQGQS IFSSDQALLT
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Retrieve as FASTA
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| Remarks |
Partial sequence from NGS. 3' is missing due to NNNN. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCCC TAGTTGCTMT CGTCTCTGCT TTTCTCATCC TTCAAATTCT CTCTCCTGTC GACGCACTAA GTACAAACTA CTATGACCAC ACTTGCCCCC AGCTCGAGGC TACGGTCACG
GCTGCTGTCA AGCAAGCCAT GATGAATGAC AAAACTGTTC CGGCTGCACT CTTGAGGATG CACTTCCACG ACTGCTTCAT TAGAGTATAC CTATTTCTCT ACCTCTCCTT CTTAACCTTG
GTCTTTCTTT CCATCTTTGT ATAGTAAAAC CTGCCCATAC GGATTCCTGA TTCGTATGGT TAGTTGGGTA TTCCATCGAT CCGGATTGAT CCCCTTATTT AAGGCTCCAT GTCATAAAAY
AATGTATTTT ACTCCATTGA TGATCACTTC CTCATGTATA GCTTAGGTTA TATATGTGGA CTTCTATGAT GTATGTTGGC TTCTTTATGA AAATTAGGGG TGTGATGGTT CTGTTCTGCT
GAACTCAACG GGAGGCAACA CAGCAGAGAA AGATGGGCCT CCCAATATCT CACTGCATGC CTTCTACGTT ATCGACAATG CGAAGAAGGC AGTGGAAGCA CTGTGCCCCG GTGTCGTCTC
CTGTGCAGAY ATCTTGGCTC TCGCTGCTCG CGATGCTGTT GCTCTGGTTC GTCCTCATAA TTAGAATATG TCAATCTATA TTGTGGTCAT TTCGACTTGT GCGGTTCACT ATTGCAAGAG
GAAAAAGTAA AATAAACTTC CAACTCATGA TGAATTTTCT TTTCTATGTG ATGTTCTCGG TGTATAGTCT GGAGGACCCA CTTGGAATGT GCCAAAAGGG AGGCTAGATG GAAGAACATC
AAAGGCAAGT GACACCAGGC AATTACCAGC CCCCATCTTC AACATCTCTC AACTCCAACA GAGTTTCTCC CAGAGAGGCC TTTCCATGGA AGATTTAGTG GCTCTATCAG GTAAGACATT
ACACAAGCGT TTGGTAAAAC TTTTAAAAGT TAAAAGGTTT GAATGGGTCA ACATTTTTTC GCCTAGATTT GATTGCGATT TCAACTATGA AAAAGATTAT ATTTGCCTAC TTTGCACTAT
CCATTCACAG GATACTTTTT TGACATGACC ACTTAGTTTT TAATCGCATC ATCACAGGAT GTGATTTGGC AGCTACGCCG TGTTACCGTC ATGTAACATT ACTTCTATCC GCATGCATGC
AGGAGGCCAC ACGCTGGGAT TCGCTCACTG CTCATCGTTC CAAAACAGGA TACACAACTT CAGCCCCACC ACCGACGTGG ACCCATCGYT GAGCCCATCC TTCGCGGCGA ACCTACGCAA
CGTGTGCCCG TTGGGCAACA CGGCAAAGAA TGCCGGATCG ACGCTGGACT CAACCACCAC CACCTTCGAC AATGTCTACT TCAAGATGCT GCGTCAGGGC CAGAGCATCT TCTCTTCGGA
TCAAGCCCTG CTCACG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCCC TAGTTGCTCT CGTCTCTGCT TTTCTCATCC TTCAAATTCT CTCTCCTGTC GACGCACTAA GTACAAACTA CTATGACCAC ACTTGCCCCC AGCTCGAGGC TACGGTCACG
GCTGCTGTCA AGCAAGCCAT GATGAATGAC AAAACTGTTC CGGCTGCACT CTTGAGGATG CACTTCCACG ACTGCTTCAT TAGAGGGTGT GATGGTTCTG TTCTGCTGAA CTCAACGGGA
GGCAACACAG CAGAGAAAGA TGGGCCTCCC AATATCTCAC TGCATGCCTT CTACGTTATC GACAATGCGA AGAAGGCAGT GGAAGCACTG TGCCCCGGTG TCGTCTCCTG TGCAGACATC
TTGGCTCTCG CTGCTCGCGA TGCTGTTGCT CTGTCTGGAG GACCCACTTG GAATGTGCCA AAAGGGAGGC TAGATGGAAG AACATCAAAG GCAAGTGACA CCAGGCAATT ACCAGCCCCC
ATCTTCAACA TCTCTCAACT CCAACAGAGT TTCTCCCAGA GAGGCCTTTC CATGGAAGAT TTAGTGGCTC TATCAGGAGG CCACACGCTG GGATTCGCTC ACTGCTCATC GTTCCAAAAC
AGGATACACA ACTTCAGCCC CACCACCGAC GTGGACCCAT CGCTGAGCCC ATCCTTCGCG GCGAACCTAC GCAACGTGTG CCCGTTGGGC AACACGGCAA AGAATGCCGG ATCGACGCTG
GACTCAACCA CCACCACCTT CGACAATGTC TACTTCAAGA TGCTGCGTCA GGGCCAGAGC ATCTTCTCTT CGGATCAAGC CCTGCTCACG
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Retrieve as FASTA
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