Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
339 (309) |
PWM (Da): |
36489.47 (33288.7) |
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PI (pH): |
5.15 (4.77) |
Peptide Signal: |
cut: 31 range:31-339 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAALYHPRIL TMQFLAAIAF ISGIIRSGAS DPPLTLDYYA SSCPNVLEII RQEMEHEVLS DPHNAALVLR LHFHDCFLNV LDxxxLLDDT VMLRGEKTAS PNINSLKGFE IIDRIKSKVE
SQCPGIVSCA DILTIAARDA VILVGGPYWD VPVGRKDSRS ASYELANTNI PTPNQGLISI IYKFLNLGLS VTDTVALSGA HTIGVARCEN FRARIYGDYE LTSGGSPLSE VHLSQLKSKC
PAAGGGDNNT APLDYxTPNT FDNSYYHLLL NGEGLLNSDQ ELYSSALALQ TKQLVEQYAL DVAAFFQQFS VSMVKMGNLT NPDSFLNGEV RKSCRFINA
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Retrieve as FASTA
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Remarks |
Complete sequence from NGS.
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGGCTT TATATCATCC AAGAATCCTC ACGATGCAGT TCTTGGCAGC CATCGCCTTC ATTTCTGGCA TTATACGTTC CGGTGCAAGC GACCCTCCAC TGACGCTCGA TTACTATGCA
TCCTCGTGCC CAAACGTGCT CGAAATCATC CGCCAAGAAA TGGAACATGA GGTGCTCTCT GATCCGCATA ACGCTGCTTT AGTACTCCGT CTACACTTCC ACGACTGCTT CGTTCAGGTG
CATTGCTTAT ATCGTAACTC TATGCAATTT TATATTCTGT TGTGTTAAAT TGAACATGTA CTTTGGGATG AAAGTATGCG TTAGTAGTGA CAACCATCTT GAAGCATGGA TCAATCTGCA
AAGGGAGAGT GTTTTCTGAA TGTTTTGGAT Gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnCTGTTGG ATGATACGGT CATGCTACGA GGGGAGAAGA CAGCTTCTCC AAATATAAAC
TCTCTAAAAG GTTTTGAAAT CATCGATAGG ATCAAGAGCA AGGTTGAATC CCAATGCCCT GGAATTGTCT CTTGCGCTGA TATATTGACC ATTGCTGCTA GAGATGCTGT CATTCTGGTA
TAGATTGTCC CCTCTCTTTC TCTCTGAATT CCTCATTGAC ATGTCAAATA ATGTTCCGAA TTATAACTTC TGTAGTTATT ACTTGCTAAC CGAGGAGAAA TATCAGAAAA TCAATGTGAC
TGATATCGAT TMTCTTTCGT ACTTRTTAGG TGGGCGGACC GTATTGGGAT GTTCCGGTGG GGAGAAAAGA CTCGAGAAGC GCAAGCTACG AGCTTGCAAA CACCAATATT CCTACTCCGA
ATCAAGGCCT CATTTCCATC ATTTACAAGT TCCTTAACCT CGGCCTCTCT GTCACCGACA CCGTCGCACT TTCCGGTAAT TATTAAGTTC CTACTCCTTT TTAAGTGATC GACCGAATTA
CTCACCCAAG GTGAGCTTAT TGCCACAGAA GAAAGCGCGC TGATTAAGAC TTGTATAGTA CATTGCATGA GACTTTCCTT TTAACTATAn nnnnnATGTG AATCGCTAGG GGCTCACACG
ATCGGCGTGG CACGCTGTGA GAACTTCCGT GCCAGAATAT ATGGGGACTA CGAATTGACG TCGGGCGGTA GTCCATTATC TGAAGTGCAC CTCAGCCAAT TGAAGTCCAA ATGCCCGGCC
GCAGGAGGGG GAGATAACAA CACCGCGCCT TTGGACTACK AAACGCCCAA CACGTTCGAC AACTCCTACT ACCATTTGCT CCTGAATGGA GAGGGATTGC TAAATTCTGA CCAGGAACTA
TACTCAAGTG CATTGGCCCT TCAGACCAAG CAGCTTGTGG AACAGTATGC ACTTGACGTT GCAGCCTTCT TTCAGCAGTT CTCCGTTTCC ATGGTAAAGA TGGGGAACCT CACGAATCCG
GATAGCTTTC TCAATGGAGA AGTGAGGAAG AGTTGCAGAT TCATCAATGC TTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGGCTT TATATCATCC AAGAATCCTC ACGATGCAGT TCTTGGCAGC CATCGCCTTC ATTTCTGGCA TTATACGTTC CGGTGCAAGC GACCCTCCAC TGACGCTCGA TTACTATGCA
TCCTCGTGCC CAAACGTGCT CGAAATCATC CGCCAAGAAA TGGAACATGA GGTGCTCTCT GATCCGCATA ACGCTGCTTT AGTACTCCGT CTACACTTCC ACGACTGCTT CGTTCAGTAT
GCGTTAGTAG TGACAACCAT CTTGAAGCAT GGATCAATCT GCAAAGGGAG AGTGTTTTCT GAATGGGAGA AGACAGCTTC TCCAAATATA AACTCTCTAA AAGGTTTTGA AATCATCGAT
AGGATCAAGA GCAAGGTTGA ATCCCAATGC CCTGGAATTG TCTCTTGCGC TGATATATTG ACCATTGCTG CTAGAGATGC TGTCATTCTG GTGGGCGGAC CGTATTGGGA TGTTCCGGTG
GGGAGAAAAG ACTCGAGAAG CGCAAGCTAC GAGCTTGCAA ACACCAATAT TCCTACTCCG AATCAAGGCC TCATTTCCAT CATTTACAAG TTCCTTAACC TCGGCCTCTC TGTCACCGAC
ACCGTCGCAC TTTCCGGGGC TCACACGATC GGCGTGGCAC GCTGTGAGAA CTTCCGTGCC AGAATATATG GGGACTACGA ATTGACGTCG GGCGGTAGTC CATTATCTGA AGTGCACCTC
AGCCAATTGA AGTCCAAATG CCCGGCCGCA GGAGGGGGAG ATAACAACAC CGCGCCTTTG GACTACCAAA CGCCCAACAC GTTCGACAAC TCCTACTACC ATTTGCTCCT GAATGGAGAG
GGATTGCTAA ATTCTGACCA GGAACTATAC TCAAGTGCAT TGGCCCTTCA GACCAAGCAG CTTGTGGAAC AGTATGCACT TGACGTTGCA GCCTTCTTTC AGCAGTTCTC CGTTTCCATG
GTAAAGATGG GGAACCTCAC GAATCCGGAT AGCTTTCTCA ATGGAGAAGT GAGGAAGAGT TGCAGATTCA TCAATGCTTG A
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Retrieve as FASTA
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