Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
323 (296) |
PWM (Da): |
34819.86 (31839.0) |
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PI (pH): |
8.96 (8.73) |
Peptide Signal: |
cut: 20 range:20-315 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTARKVHLVL SLSLLLVVAC NADGKLRENF YKKSCPQAEK LVRDITWNKA QSDPTLGAKL LRMHYHDCFV QGCDGSILLD PVGTTQSEKN AVPNLALAGF DVIDDIKTQV EQACPNIVSC
ADVLSLAARD AVSFPVRKSM WNVLTGRRDG KVSLASNVAG KLPSPFANFS TLAQSFSETG LNVNDLVVLS GKPT*SVRHC GIISNRLYNF TGKGDADPSL NAAYAASLRT QCPNPANPAK
TVDMDPQSSL SFDSHYFDIL TENKGLFQSD AALLTNRGAA KVVQRLRSPA KFFAEFGKSM KKMGDIEVLT GTAGEIRKQC RVVN
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Retrieve as FASTA
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Remarks |
Complete sequence from NGS. One stop in frame. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACTGCTA GGAAAGTTCA TTTGGTTTTA TCACTAAGTC TTCTCTTGGT TGTAGCGTGC AATGCAGATG GTAAATTGAG GGAGAACTTC TACAAGAAGA GTTGCCCTCA AGCTGAGAAG
CTTGTGAGGG ACATCACTTG GAACAAGGCC CAATCTGACC CTACTCTGGG TGCTAAGCTT CTCAGGATGC ACTATCACGA TTGCTTTGTT CAGGTAGCAA ATTCCTATAT ATCCCCACCG
TAGCTTTTCC AATCAAAACA GGCCGAGAGT AACCATTTTC TATGAGAAAA GTTGCCGGCT TTCTTTTTTT TACGGTGTGT CACTCGAGAT TCCTGTCAAC CTAATTAAAA GTTTAAGCCA
TCATTATGCC AATGATCATC TTCGCTTGTT GAGACAGAAG ATGGGGAATG TAGGGAACAT ATTGTTCAAC TTGTATTTCT CTAATTACTT TAAACTTTTA GACTTATAGG ATATGAACAT
ATCTCAACCG TTCTAGATAA ATCTTGTTTT ACATCATAAG CATTCGGACT TAGCGAGCTC AACTCTCCAT TTGATGAAAT TGTGGAAATA ATTATTTCAT AGGGATGCGA TGGATCTATA
CTGCTGGACC CTGTGGGGAC AACCCAATCT GAGAAGAACG CAGTACCAAA TCTCGCCCTG GCTGGTTTTG ATGTTATCGA TGACATCAAG ACACAAGTTG AGCAAGCTTG CCCTAACATC
GTCTCTTGCG CTGACGTTCT TTCTCTAGCT GCTCGCGATG CTGTTTCTTT CCCTGTAAGA TAAACTTGCC TGATCGATTG TCTAAAACCA TAATTTTCAT CATAAAAAAT GGTCGAAATA
TAAGGTTTGT CATTTGAACA CGATGGCGTG AATTGCAGTT TAACAAGTCG ATGTGGAATG TGTTGACGGG AAGAAGAGAC GGCAAGGTTT CATTAGCGTC CAATGTCGCT GGGAAGCTTC
CATCTCCTTT CGCAAACTTT AGTACTCTCG CACAAAGTTT CTCTGAGACA GGCCTTAATG TGAACGATCT TGTCGTTCTC TCTGGTAAGC CAACATGATC ATGTCTTTTT TCGGATGTTT
GAATTGATAT TTCGTGACTT ACATTTGGAT CATCAAATTG GCATTGAAGC TAATTAAAGT ACATAACTGA CATACTRCAT CGAGTTAGAC ATTGCACAAT GTATAATGAA GTCATCTATA
TCTTTGCTCC TTCATCAGGT GCGCATACCA TTGGAGTTGC TCATTGYGGC ATAATTTCCA ATAGGCTCTA CAACTTCACC GGGAAAGGAG ATGCCGATCC CTCTCTGAAC GCTGCCTACG
CTGCATCCCT CCGGACCCAG TGCCCTAACC CGGCCAACCC GGCTAAGACG GTGGACATGG ATCCACAAAG CTCCCTCTCC TTCGATAGCC ATTACTTCGA TATTCTCACG GAAAACAAGG
GATTGTTCCA ATCTGACGCT GCGCTCTTGA CAAACCGAGG CGCAGCCAAG GTGGTCCAGC GCCTTCGGTC GCCAGCCAAG TTCTTTGCCG AGTTTGGCAA ATCAATGAAG AAAATGGGGG
ACATCGAGGT ACTGACGGGA ACTGCCGGAG AGATTAGAAA ACAATGTCGT GTGGTGAATC AATCRTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACTGCTA GGAAAGTTCA TTTGGTTTTA TCACTAAGTC TTCTCTTGGT TGTAGCGTGC AATGCAGATG GTAAATTGAG GGAGAACTTC TACAAGAAGA GTTGCCCTCA AGCTGAGAAG
CTTGTGAGGG ACATCACTTG GAACAAGGCC CAATCTGACC CTACTCTGGG TGCTAAGCTT CTCAGGATGC ACTATCACGA TTGCTTTGTT CAGGGATGCG ATGGATCTAT ACTGCTGGAC
CCTGTGGGGA CAACCCAATC TGAGAAGAAC GCAGTACCAA ATCTCGCCCT GGCTGGTTTT GATGTTATCG ATGACATCAA GACACAAGTT GAGCAAGCTT GCCCTAACAT CGTCTCTTGC
GCTGACGTTC TTTCTCTAGC TGCTCGCGAT GCTGTTTCTT TCCCTTTTAA CAAGTCGATG TGGAATGTGT TGACGGGAAG AAGAGACGGC AAGGTTTCAT TAGCGTCCAA TGTCGCTGGG
AAGCTTCCAT CTCCTTTCGC AAACTTTAGT ACTCTCGCAC AAAGTTTCTC TGAGACAGGC CTTAATGTGA ACGATCTTGT CGTTCTCTCT GGTGCGCATA CCATTGGAGT TGCTCATTGC
GGCATAATTT CCAATAGGCT CTACAACTTC ACCGGGAAAG GAGATGCCGA TCCCTCTCTG AACGCTGCCT ACGCTGCATC CCTCCGGACC CAGTGCCCTA ACCCGGCCAA CCCGGCTAAG
ACGGTGGACA TGGATCCACA AAGCTCCCTC TCCTTCGATA GCCATTACTT CGATATTCTC ACGGAAAACA AGGGATTGTT CCAATCTGAC GCTGCGCTCT TGACAAACCG AGGCGCAGCC
AAGGTGGTCC AGCGCCTTCG GTCGCCAGCC AAGTTCTTTG CCGAGTTTGG CAAATCAATG AAGAAAATGG GGGACATCGA GGTACTGACG GGAACTGCCG GAGAGATTAG AAAACAATGT
CGTGTGGTGA ATCAATCCTA A
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Retrieve as FASTA
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