Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
268 (244) |
| PWM (Da): |
28894.3 (26307.9) |
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| PI (pH): |
5.13 (4.63) |
Peptide Signal: |
cut: 25 range:25-268 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MLIGRYSLLL ALAFLALHHG VCHGGKLKMM FYHESCLRAE TIVRNITWSR VAAGCDASVL LDSTNGTSAE KEAIPNRSLE EFDVINEIKD ELEVECPLTV SCADILALTA QDTVSFQFGK
AMWGVLSGRR DGRVSLASEA LDNLPSPASD FNALRQQFAD NGLGVPDLVC LSGAHCVVFA KRLFNFTANN DTDSSLDRGN GNAAMLKAQC SSPCNTQGLF KSDATLLTDK RAANFAWIYQ
xYSMKKMDTI AVLTDDEGEI GKNCRVVN
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Retrieve as FASTA
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| Remarks |
Pseudogene sequence from NGS. PS, FHDC and VALS are missing. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTTGATTG GCAGATACTC TCTCTTATTA GCTCTTGCAT TTCTAGCACT TCATCATGGG GTTTGCCATG GAGGCAAGCT CAAGATGATG TTCTACCACG AGAGCTGTCT GCGGGCTGAG
ACGATCGTGA GGAACATCAC TTGGAGCAGA GTTGCAGCCT ATGAAGCACC GACATTCTCC AAGAACTTTC GTGTAGTGTC GTGTCGGACA CTTCGACATA TATCGAAGTC AATGTTAAAA
ATTCAATAAA TGAGAGGTCA ATATGTGGAT GTGTGTGTGT GAAAATAAAA CACAATAATA AAAATAGTAA ATGGAGAAAG GAGAAAAACC TAGTCTTATT CTTCCAACAT ATCTAACATG
AGGGTCCAGA ATATGAATCG CTTGTTTTTT CTCCAAGTTA TTGTGGATTA ATGTTTTTAG TGTATATTCA TTCTAGGCTT TATTTATTTA TTTATGAGTT TGATTCAAAT TAATTTGATT
GAAATAATCA TAAAAATTAT AATTTATTAA AAATATATAG GCGTGTCGTG TCGTGTCGTG TCGTGTGTCG TGCGTCGGTG TCGGTACTAC TTAGGTTGCG GTCTGTGTAC ATACAAGATC
ATAACGCATG TTCTCATGAG TGCAATCCAG CAATGCAATG GGTCGTTGAA TTTACAGAAG AAGTGGGAAA CGATGATAAG TGAAGTCGCG TGAGCTCTTC CTGGCTAACT TATGTCACCC
TAACTCGTGC GTAGTACTTA ATCCTATGGT TCAAAACGCG AGGGAGAACG ACGTGGCTTG ATGTTTGTTT CGATATCTTG ATCTCTATTC TCATGCGCCT GCTCATCGAA TAACGAAAGT
TCGACATATA TTGCTATGGA CTAGCAAAAT AGCCCTATTT GTCTAACCAA AATGATCTAT TGTCCACGGG ATAAATATTT GCAGGGTTGT GATGCGTCAG TGCTGTTAGA CTCAACTAAC
GGAACAAGCG CCGAGAAGGA AGCCATTCCG AACCGGTCTC TTGAAGAATT CGACGTCATC AACGAGATAA AGGATGAGCT CGAAGTGGAA TGCCCCCTCA CTGTCTCCTG TGCCGATATC
CTTGCGCTCA CTGCCCAGGA CACCGTCTCC TTTCAGTTTG GAAAGGCAAT GTGGGGGGTA CTGAGTGGTC GGAGAGACGG CAGAGTTTCA TTAGCTTCGG AAGCCTTGGA CAATCTTCCA
TCACCTGCTT CCGATTTCAA CGCCCTTCGG CAACAATTTG CCGATAATGG CCTGGGAGTC CCTGATCTTG TTTGCCTTTC AGGTTTGAAA TTCATTAACT TTTATGTGTT TCTTTAATCG
TTCTATTCAT TGCAAATTCC TATCTTAACA ATTTTGCAAG GCATTCCAGC TAATTTGATT ACGAGATCTT TGTTTCGGGT GCGCACACCA TCAGAGGGGC GCATTGTGTG GTGTTCGCCA
AGAGGCTCTT CAACTTCACC GCCAACAATG ACACCGACTC CTCGCTCGAT CGGGGCAATG GCAATGCCGC CATGCTGAAG GCTCAGTGCT CGAGCCCTTG CAACACTCAA GGCCTATTCA
AGTCCGACGC GACGCTGCTC ACGGACAAGC GCGCGGCCAA TTTTGCTTGG ATTTACCAGA nnTATTCAAT GAAGAAGATG GACACCATTG CAGTTTTAAC TGATGATGAA GGAGAAATAG
GAAAGAATTG CAGGGTTGTT AATTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTTGATTG GCAGATACTC TCTCTTATTA GCTCTTGCAT TTCTAGCACT TCATCATGGG GTTTGCCATG GAGGCAAGCT CAAGATGATG TTCTACCACG AGAGCTGTCT GCGGGCTGAG
ACGATCGTGA GGAACATCAC TTGGAGCAGA GTTGCAGCCG GTTGTGATGC GTCAGTGCTG TTAGACTCAA CTAACGGAAC AAGCGCCGAG AAGGAAGCCA TTCCGAACCG GTCTCTTGAA
GAATTCGACG TCATCAACGA GATAAAGGAT GAGCTCGAAG TGGAATGCCC CCTCACTGTC TCCTGTGCCG ATATCCTTGC GCTCACTGCC CAGGACACCG TCTCCTTTCA GTTTGGAAAG
GCAATGTGGG GGGTACTGAG TGGTCGGAGA GACGGCAGAG TTTCATTAGC TTCGGAAGCC TTGGACAATC TTCCATCACC TGCTTCCGAT TTCAACGCCC TTCGGCAACA ATTTGCCGAT
AATGGCCTGG GAGTCCCTGA TCTTGTTTGC CTTTCAGGGG CGCATTGTGT GGTGTTCGCC AAGAGGCTCT TCAACTTCAC CGCCAACAAT GACACCGACT CCTCGCTCGA TCGGGGCAAT
GGCAATGCCG CCATGCTGAA GGCTCAGTGC TCGAGCCCTT GCAACACTCA AGGCCTATTC AAGTCCGACG CGACGCTGCT CACGGACAAG CGCGCGGCCA ATTTTGCTTG GATTTACCAG
AnnTATTCAA TGAAGAAGAT GGACACCATT GCAGTTTTAA CTGATGATGA AGGAGAAATA GGAAAGAATT GCAGGGTTGT TAATTAA
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Retrieve as FASTA
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