Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
329 (309) |
PWM (Da): |
31155.61 (28920.4) |
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PI (pH): |
4.89 (4.69) |
Peptide Signal: |
cut: 21 range:21-329 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSPHLSVLFL LLLLRQTAMA VALQPGYYAE TCPGAEAAVR EAMKVALIRE PRSIASVMRF QFHDCFVNGC DGSLLLDDTP TMVGEKEALS NINSLRSFEV IDEAKDALEK ACPGIVSCAD
VVIMAARDAV ALTGGPDWEV KLGRMDxxxx xxxxxxxxxx xxxxxxxxLI DLFAGYGLSV KDLVALSGSH SIGQARCFSI MFRLYNQSGT GRPDPAIDPG FLDELYKLCP QGVDxxxxxx
xxxxxxxxxx xxxxxxVAGR GFLNSDQTLF TFPQTRAYVR RFSLDQDEFF RAFLEGMIKM GDLMSDRPGE IRRNCRVVNS RPVDGLSES
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Retrieve as FASTA
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Remarks |
Partial sequence from NGS. PS is missing due to NNNN. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCCCTC ACCTGTCTGT TCTCTTCCTC CTCCTTCTCC TCCGGCAGAC GGCCATGGCC GTGGCTCTCC AGCCCGGCTA CTACGCCGAG ACGTGCCCGG GAGCCGAGGC CGCGGTGAGG
GAAGCGATGA AGGTGGCCCT GATCAGGGAG CCCCGGAGCA TCGCCTCCGT CATGCGCTTC CAGTTCCACG ACTGCTTCGT CAATGnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnCTCTT CCCGAAAGGG CTGCGACGGG TCTCTTCTCC TGGACGACAC GCCCACCATG GTCGGAGAGA
AAGAGGCCCT GTCCAACATC AATTCGCTGC GGTCGTTCGA AGTCATCGAC GAGGCCAAGG ACGCGCTGGA GAAGGCCTGC CCCGGCATCG TCTCCTGCGC CGACGTCGTC ATCATGGCTG
CTCGGGACGC AGTCGCCCTG GTGAGTAAAA TCTCTTCATC TTTTTACCAA CGAACAGAGC ACGTCAAGAA ATGACACTAA ACATCATTCC AAATTGAATT TACTTTGGAA AACCAGATTT
ATGTGGACAC AAAGAAGAAG AGCTGTCCTT TTAATTACTG TAGACAATGC AATGGCAATT TATGAAAATT TATAAAGTGA GATGAAAGGG AAATGACATT GGAGATATTG AATTATTTGT
TCTTTTGATT CGATGAATAT ATTCTGAGAT GGGGTCGGCG GTTCACAAAT AGGACATGCA AAAAGACAGT ATTTTTTTTC CATAAATGGT GAAACTGCAG AATAATAGAT ATTTTGGAGC
CTAGACGGTT TTGGCTGCCG GATTTGGCAA ATGGTCCCTT CTTCTAGTCC GGGTCCTGGT TCCTGAACAG GCTCGTGAGT GCGGGCCACT CTGTTTCCGG CCCTGCGAAT GCGAAAGACG
ATTGATTTCG CCCGATTTTA GTCCCTAAGG TAGGACCAGG GGAAACAGGG GACATTTACA GCGCTGATCT TAGCCTAAGA ACGGACGATC AACTTTGATT TGAGTTCTAA TGCGACGGAG
CTATCTTTTC TAGACCGGCG GGCCGGATTG GGAAGTGAAG TTGGGGAGGA TGGACAGnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnTCC TTATCGATCT TTTCGCCGGC TATGGCCTCT CCGTCAAGGA CCTGGTGGCC CTCTCCGGGT CTCACTCCAT CGGGCAGGCC CGGTGCTTCT CGATCATGTT CCGGCTCTAC
AACCAGTCAG GGACCGGCAG ACCGGACCCC GCGATCGACC CAGGTTTCCT GGACGAGCTC TACAAGCTCT GCCCGCAGGG AGTCGATnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnGTC GCAGGCAGAG GGTTCCTGAA TTCGGACCAG ACGTTGTTCA CATTCCCGCA GACAAGGGCG
TACGTGAGGA GGTTCAGCCT AGACCAGGAC GAGTTCTTCA GGGCTTTCCT CGAGGGGATG ATCAAGATGG GGGATCTGAT GTCGGACCGG CCCGGCGAGA TCAGGAGGAA CTGTAGGGTG
GTGAACAGCC GGCCAGTGGA TGGCTTGTCG GAATCTTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCCCTC ACCTGTCTGT TCTCTTCCTC CTCCTTCTCC TCCGGCAGAC GGCCATGGCC GTGGCTCTCC AGCCCGGCTA CTACGCCGAG ACGTGCCCGG GAGCCGAGGC CGCGGTGAGG
GAAGCGATGA AGGTGGCCCT GATCAGGGAG CCCCGGAGCA TCGCCTCCGT CATGCGCTTC CAGTTCCACG ACTGCTTCGT CAATGGCTGC GACGGGTCTC TTCTCCTGGA CGACACGCCC
ACCATGGTCG GAGAGAAAGA GGCCCTGTCC AACATCAATT CGCTGCGGTC GTTCGAAGTC ATCGACGAGG CCAAGGACGC GCTGGAGAAG GCCTGCCCCG GCATCGTCTC CTGCGCCGAC
GTCGTCATCA TGGCTGCTCG GGACGCAGTC GCCCTGACCG GCGGGCCGGA TTGGGAAGTG AAGTTGGGGA GGATGGACCT TATCGATCTT TTCGCCGGCT ATGGCCTCTC CGTCAAGGAC
CTGGTGGCCC TCTCCGGGTC TCACTCCATC GGGCAGGCCC GGTGCTTCTC GATCATGTTC CGGCTCTACA ACCAGTCAGG GACCGGCAGA CCGGACCCCG CGATCGACCC AGGTTTCCTG
GACGAGCTCT ACAAGCTCTG CCCGCAGGGA GTCGATnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnGTCG CAGGCAGAGG GTTCCTGAAT TCGGACCAGA CGTTGTTCAC ATTCCCGCAG ACAAGGGCGT ACGTGAGGAG GTTCAGCCTA GACCAGGACG AGTTCTTCAG GGCTTTCCTC
GAGGGGATGA TCAAGATGGG GGATCTGATG TCGGACCGGC CCGGCGAGAT CAGGAGGAAC TGTAGGGTGG TGAACAGCCG GCCAGTGGAT GGCTTGTCGG AATCTTGA
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Retrieve as FASTA
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