Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
331 (309) |
PWM (Da): |
35795.18 (33399.8) |
Transmb domain: |
i7-29o |
PI (pH): |
6.35 (5.71) |
Peptide Signal: |
cut: 23 range:23-331 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASKHLLLFQ ITLISLILAV SCFPAHSPIG QLSPYYYDGS CPRLQWIVRS NVWAAFQKDT RIAASLLRLH FHDCIVDGCE GSVLLDDTVD MKGEKNALPN RNSLRGFEVI DAIKADLENF
CPFTVSCTDI LTLAAREAVY xSGGPYWAVL LGRRDGITAS DKSANEQIPS PIEPLDNIVA KFTSKGLELK DVVVLSGGHT IGFAQCFTFK RRLFNFKGSG KPDPTLDTSL LSSLQSTCPN
KDASNTNLAP LDSTVDKFDN YYYANLVNNS GLLESDQALI ADARAAPLVN SYTTNPTLFY NDFAASMLKL GNVGILTGQS GQIRKQCGSV N
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Retrieve as FASTA
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Remarks |
Complete sequence from NGS (3 introns). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCCA AGCACCTTTT GCTATTCCAA ATCACATTGA TTAGCTTGAT CTTAGCAGTC TCTTGCTTCC CTGCTCATAG CCCGATAGGC CAGCTCTCTC CGTATTATTA TGACGGATCG
TGCCCTCGCT TGCAATGGAT CGTCAGATCC AACGTTTGGG CAGCCTTCCA GAAAGATACA AGGATTGCTG CCTCTCTTCT TCGATTACAC TTTCATGACT GCATCGTCGA TGTAAGTAAT
TCTATCCAAG TGTCGTCATG ATTGCAGCTT ATTTGCGTGC ACTTTTCCTC GATGATAATT TTAGGTTCTG TCGCTTCTTC TCGGTTTGGC GACTTAGCAG AGACATGTAC AGCACGTTTT
ATTAGGAAAA GTMTTGACGG CATATGTTTC GCATTTGCAT TGCTACCTAA CATCGTGACA TGGTTAAGCA TGTGACCGGA CTCGAGGCTT ATGTTATCCC TAGACACTGA ACAACACTAC
ACCATCGATG TTAGGGCTGC GAAGGATCCG TGCTTCTTGA TGACACCGTA GACATGAAGG GCGAGAAGAA CGCCTTGCCA AATCGCAACT CTCTCCGAGG CTTTGAAGTC ATCGACGCTA
TAAAAGCCGA CCTCGAGAAT TTCTGCCCCT TCACCGTCTC GTGCACTGAT ATACTCACCC TAGCTGCAAG AGAAGCCGTC TATAYGGTAC CTTAATAAAC CCCAGTTCTC TTCTTCACGA
ATACAATAGT TGAGCATGGC TCCTAAGCTA ATAAGCACTT AATGAAAAAC TAATTGGCCT TGATGGAGTT TTAGTCAGGT GGGCCTTATT GGGCCGTACT ATTGGGAAGA AGAGATGGAA
TCACGGCTAG CGACAAGTCG GCCAATGAAC AGATACCGTC GCCTATTGAG CCTTTGGATA ACATCGTTGC TAAGTTCACT TCAAAGGGTC TGGAGTTGAA GGATGTTGTG GTCCTCTCAG
GTACTTAATT TTCTCTGCAT GCAATAGTAG TGAACAAAAA GCAGACTTCT CCGAGCAATA CCAAGGCCAG AAGAACAATA ACCACAGAGA AATAAAGTCA TATGAACTAT TTTTGGTCTA
ACAKAATATA GACAGAATTA ATGATCACGA TCACAATAAG AAAGAYRTGA AATCCATGTC TTTTTCATTG ATACGAGATA ACCAAGGTAT GTTTGGAAGY GCTGTATATG TAAAGGAAGC
GAGTCTAATG AGTTGTCCTC ATTTTTTCAA AATCACTTTT AGGAGGGCAC ACCATAGGCT TTGCCCAGTG TTTCACCTTC AAGAGGAGGC TCTTCAACTT CAAAGGGTCC GGCAAGCCTG
ACCCGACCTT GGACACCTCC CTCTTATCGA GCCTCCAGAG CACATGCCCC AATAAAGACG CCTCCAACAC CAACCTCGCT CCTCTCGACT CCACTGTGGA CAAATTCGAC AACTACTACT
ACGCCAACCT GGTGAACAAT TCGGGCCTAC TCGAATCGGA TCAAGCCTTG ATCGCTGACG CGAGAGCCGC CCCACTCGTC AATTCCTACA CCACCAACCC CACGCTGTTC TATAATGATT
TCGCCGCTTC CATGTTGAAG TTAGGCAATG TTGGAATTCT CACTGGGCAG AGTGGGCAGA TTAGGAAGCA GTGTGGCTCC GTGAACTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCCA AGCACCTTTT GCTATTCCAA ATCACATTGA TTAGCTTGAT CTTAGCAGTC TCTTGCTTCC CTGCTCATAG CCCGATAGGC CAGCTCTCTC CGTATTATTA TGACGGATCG
TGCCCTCGCT TGCAATGGAT CGTCAGATCC AACGTTTGGG CAGCCTTCCA GAAAGATACA AGGATTGCTG CCTCTCTTCT TCGATTACAC TTTCATGACT GCATCGTCGA TGGCTGCGAA
GGATCCGTGC TTCTTGATGA CACCGTAGAC ATGAAGGGCG AGAAGAACGC CTTGCCAAAT CGCAACTCTC TCCGAGGCTT TGAAGTCATC GACGCTATAA AAGCCGACCT CGAGAATTTC
TGCCCCTTCA CCGTCTCGTG CACTGATATA CTCACCCTAG CTGCAAGAGA AGCCGTCTAT ACGTCAGGTG GGCCTTATTG GGCCGTACTA TTGGGAAGAA GAGATGGAAT CACGGCTAGC
GACAAGTCGG CCAATGAACA GATACCGTCG CCTATTGAGC CTTTGGATAA CATCGTTGCT AAGTTCACTT CAAAGGGTCT GGAGTTGAAG GATGTTGTGG TCCTCTCAGG AGGGCACACC
ATAGGCTTTG CCCAGTGTTT CACCTTCAAG AGGAGGCTCT TCAACTTCAA AGGGTCCGGC AAGCCTGACC CGACCTTGGA CACCTCCCTC TTATCGAGCC TCCAGAGCAC ATGCCCCAAT
AAAGACGCCT CCAACACCAA CCTCGCTCCT CTCGACTCCA CTGTGGACAA ATTCGACAAC TACTACTACG CCAACCTGGT GAACAATTCG GGCCTACTCG AATCGGATCA AGCCTTGATC
GCTGACGCGA GAGCCGCCCC ACTCGTCAAT TCCTACACCA CCAACCCCAC GCTGTTCTAT AATGATTTCG CCGCTTCCAT GTTGAAGTTA GGCAATGTTG GAATTCTCAC TGGGCAGAGT
GGGCAGATTA GGAAGCAGTG TGGCTCCGTG AACTAA
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Retrieve as FASTA
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