Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
215 |
| PWM (Da): |
23208.69 |
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| PI (pH): |
8.62 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
VQGRGTRVES YSGSCPRAEA IIRSTIQAHF RSDPIVAPGL FFFFFNPSPP PMHFHDRFIQ GCDGSVLING PNAEKTAPPN HLLKGYELIN DAKTQLEAAC PSVVSCADIL ALPARNSVAL
LFNASIDPSF VSQLRSLCPQ NGDGTRRVAL DTGSPSRFDA SFFANLRSGR GVLESDQKLW TFNMEFAKSM VKMSNIGVKT GTNGEIRKIC SAINA
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Retrieve as FASTA
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| Remarks |
Partial sequence from NGS. 5' and 3' end are missing due to NNNN. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTGCAAGGAC GAGGTACGAG AGTAGAGTCC TACTCAGGTT CGTGTCCGCG TGCCGAGGCC ATTATTAGGT CAACGATTCA AGCCCATTTC CGGTCCGATC CCATTGTGGC TCCTGGGCTG
TTTTTTTTTT TTTTTTTTTG Gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnGTGTGG GAGTTGAAAC CCACTCCTGA AATGAAATCG
TCCCCACCCC AATCCCCCAT GAGAAAGTGG GGATTTGAAC CCCTCACCTC CCCCTATGCA CTTTCATGAT CGCTTCATCC AGGGATGTGA CGGTTCGGTT CTCATCAATG GGCCCAACGC
TGAGAAAACG GCGCCTCCGA ACCATTTGCT GAAAGGATAT GAATTGATCA ATGACGCGAA GACCCAGCTC GAAGCTGCGT GTCCTAGTGT CGTTTCATGT GCTGATATTC TTGCTCTTCC
AGCCCGTAAT TCCGTTGCTC TGTTATTTAA TAATTTCATT CACTTCCATG CAAATCTTGG GCGAGGTCCA TGATATATGT GAGGGTTCTG GACTGGACGT GGATTCCTTA ATTTTCCGAT
AGATATAGTG ATGCCCTTGA TGCAAGGCCT AATAAACTTT GGTAGCAACA CTGAAGTTTA GCAAGACAGA AGTTAGGCCA TGAAGACTAA GGACACGAAT GATGTAGATT GATAACGTGA
GGAGGTGTAG ATGAACCAAT AACCATTAGG TAGTCGTTTT TTCCACTCTC TATTTCTAGA CTTTTAAATC TACCTGTTTA GGCTTCATGA CTTTTGGGTT GAATTTCTGC TATGACTTAC
CATCAGGTTG AAAACACTAT TGGAGAGTTA GGGTGCGTTT GTTTGCGTTT CTGTTTAAAA ATTGTTCCAG GGAACAGAAA TAGAAAAAAA TGTTTCTGTT CCTGGGAACA ATTTCTGAAC
AAAAAAACGC GTTTGGTAAA CTTGTTCCGG GTTTTTCTTA TTTTTCCTTT TTTTCTTTTT TCTTTTTCCT TTTTTCTTTT TTCTTCTTTT GGCCGGTCGT CGGCCTCAGC CATGGCCGGC
GACCGGCCGA CGAGnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnTGGGCGA GGCCGCCGGC CCTCGTCAGC
CGGTCGCCGG CCATGGCCGA GGCCGGCGAC CGGCGAAAGA AAAAAGAAAG AAAATAAGAA GAAAAAGAAG AAAAATTTCA AAAGTGTTTC TGATTTGTGT TTCTTGTTTC TGTTTCTTTT
TTGTTCCTGG GAACAAAAGA ACAAAAAAAA CAGAAAAAGT GTTTAAAAAC AAAAAAAAGA AATACAAACA AACGCAGCAT TATACTTTCG AGAAGTCAGT GCGACTGCAG GTGCTGTCAC
AATCACTTGC CTCATGGTCT GTCCATTGCT GTTATATTGT ATTGATAAAG ACAGAGATGC CATTGGGCAG AGATGCCATT GAGCGTAAAA ATCTCTTGGT CGTGGGTACA TTTTTCTATT
TCTTCACGAA AATATTTTTA ATATCTTAAC TTTTGGATTC ACCTGTGTCA GGTTGCAAAT CTCGTTGGCT TTGTGATTGG ACCATCTGGT ATCAGTTGGT TAATTGCTCG ATTCCTTCAT
AAAGAAGGTA TATCCCAATG TTGCCACCTT TGCAAGAGCT AAACATGCAT TGTCTGTAAA GATTGACTTT CTATTTTGGT GATAGTGCAT CATTAACCAT GTTACTCGAT ACATCTCCTA
AGATTGATGC TCCAGTGCTC ATTAAATTTC AGCTCCATTT TTATCATCTA GAAATATGGT CTCAAAGACA ATCGATGCAG TCCTTGTGTG GCTTTCTAGA TAAGAATGAC CCACCTTAGG
GAGCACAGTA CGGTGTTAAT TTTTTGTTTT TTTTTAGGAT TGTTCCTTTT AAACTTTCAG GCTGATATGG ATCAAGTCTT TGAATAAGAT AGATTGTTGA TGTTATCAAA AGATTTCTTA
TGTGAAACTT TTGAAGCCTG CTGGTTGATA GCATAGGATA AATGGTGCAA GTTGTGCCTT TGTCAAATAA GACATTCTTC AACCTGCCAG CCTCTCCAAG CTGTCCGCAT GAAATGCAAA
AGATTTAGGC AAAAGCTTTC TGCATGAGAT ACACAAGTTT AAGGCCAGTT GGACCATTAC ATATGTACTA GCTATCATTA TTTCAGTTTT CCTCTCTATT GGCAATTGAA ACTGTAACTA
GAGTCTGGGA GGAGATGGAT GGATGCTGCT CTAGTGGGCA AGCGGAGATC GTCAGCCGCT TCTGATATCG CAGAGCTCTA TTAGCATCTA AGAGATTCTG CCAAATTTGT CCTTTCATGT
CACTACATAT AGCATTTATT GGGGATTCTT GTTTCCTTCT TATTCCCTCA ATTTTGGAGC TCCAGGCATT GATAGAGCAT CCATCTTGCA GTGCAGCTCA TGTTTCATAT CCAGGATGCC
AAACGGAAAG GACGGTGAAT CAGACACCAT GATTTGAAAG GGTTGTACTC AGTTGCACCA CTGCACAGTA GGATTATTTA GCAATCGACC ACGGAGAAGA GCATTGATGA AATTTCTGGA
CATACTGACC TTGGCATCAG AGTTAACCTG GAAAGGCATT CCATTACTCC TCCCGGCACT CGGTGGTAGA GTCAGATTTG TTAGCCCTGT ATGGACTGGT AACTCTTCAG TGCTCGTGAA
AGGTGGTGCT GCTGAGAACT ATTTTTGTAT AACGTTGTTT TGTCCTAGTC AATTGGTTGT GATGTAACAA ATAGTTATCT ATGGAATATA AATTAATCAG ATACAGATGC ACATGAAAAT
GATATCAGTC AGGTTGCTCT TTCAACATTT TTGAAATATC GAAATGAACG GGTAATAAGG CCATTTTTCT TTGTCGAAGT ATTAAGGCCA CTTATGAAGA ATAGGAGTGT CTTTGATTTA
TAATCCCTGT ACATTTACTT CAAATGTGCA TTATTTTTAC TCTTTTCGTG TCTACTATAA ATTGGACAAG ACATACTTAA ATCCTTCGTA GAGATAATAT CTGAAAGAAT AATACCTCAA
GTGTTAATAC TTGGCACGGA TGGATATATA ATTGCCAAAA ATTTTAGAAT GTACACTTAA GTGTCACCnn nnnnnnnnnn nnnnnnnnnn nACGCTTCCA TCGATCCTTC CTTTGTTTCT
CAACTCCGGT CTCTGTGTCC ACAAAACGGT GATGGCACGA GGCGTGTTGC CCTCGACACC GGCAGCCCTA GTCGTTTCGA TGCATCCTTC TTTGCAAACT TGAGGAGCGG AAGGGGAGTT
TTGGAGTCTG ATCAGAAGCT ATGGACCGAn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnAC TTCAACATGG AGTTTGCTAA ATCGATGGTG
AAGATGAGTA ACATTGGCGT GAAGACAGGG ACCAATGGTG AAATTAGGAA AATATGCTCT GCCATTAATG CATGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTGCAAGGAC GAGGTACGAG AGTAGAGTCC TACTCAGGTT CGTGTCCGCG TGCCGAGGCC ATTATTAGGT CAACGATTCA AGCCCATTTC CGGTCCGATC CCATTGTGGC TCCTGGGCTG
TTTTTTTTTT TTTTTAACCC CTCACCTCCC CCTATGCACT TTCATGATCG CTTCATCCAG GGATGTGACG GTTCGGTTCT CATCAATGGG CCCAACGCTG AGAAAACGGC GCCTCCGAAC
CATTTGCTGA AAGGATATGA ATTGATCAAT GACGCGAAGA CCCAGCTCGA AGCTGCGTGT CCTAGTGTCG TTTCATGTGC TGATATTCTT GCTCTTCCAG CCCGTAATTC CGTTGCTCTG
TTATTTAATG CTTCCATCGA TCCTTCCTTT GTTTCTCAAC TCCGGTCTCT GTGTCCACAA AACGGTGATG GCACGAGGCG TGTTGCCCTC GACACCGGCA GCCCTAGTCG TTTCGATGCA
TCCTTCTTTG CAAACTTGAG GAGCGGAAGG GGAGTTTTGG AGTCTGATCA GAAGCTATGG ACCTTCAACA TGGAGTTTGC TAAATCGATG GTGAAGATGA GTAACATTGG CGTGAAGACA
GGGACCAATG GTGAAATTAG GAAAATATGC TCTGCCATTA ATGCATGA
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Retrieve as FASTA
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