Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
326 (300) |
PWM (Da): |
35111.94 (32244.3) |
Transmb domain: |
i7-29o |
PI (pH): |
9.19 (9.19) |
Peptide Signal: |
cut: 27 range:27-326 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAAQKLLSLL VFQLALVAFI LDVANAQGLK IGFYKNTCPQ AEEIVKKAAA SFISRAPSLA APLLRMHFHD CFVRGCDGSV LLNSTSSNQA EKDAFPNLSL RGYQVIDAAK DPLEKKCPGV
VSCADILALV ARDAVSMVNM GYWQVPTGRR DGRVSKLQDA LNNLPAPTFS ISALKSSFAA KGLSVKDLAV LSGGHTLGMS HCSSFTNRLY NFTGKNDADP SMDPNYVAQL KTKCKPNDAT
TIVEMDPGSA KTFDVDYYTL VSKRRGLFQS DAALLTDSTT KSYVQLQLTS KSTFAKDFGV SMVNMGNIGV LTGNSGEIRK KCYLVN*
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from NGS. |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTGCTC AGAAGCTTCT CTCTCTCCTG GTTTTCCAGC TCGCGCTCGT CGCTTTTATT CTCGACGTCG CCAATGCTCA AGGCCTCAAA ATAGGGTTCT ACAAGAATAC GTGCCCTCAG
GCTGAGGAGA TAGTTAAGAA AGCGGCGGCG AGCTTCATTT CTCGAGCCCC CTCTCTTGCC GCTCCTCTCT TGAGGATGCA TTTCCATGAC TGCTTCGTCA GGnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnGAGTGACC CCGTTGCCAT CAATTTCTCA ATTACTGCAT GTAGTTTCTT TGAATCAAAC ATATGCATAT CACTCCCCGC ATCATTAATT TGTTGCGAAA TAAGTTATAG
CTATAATTAG TTGATGTGTA GAGATCTATC TTAATTAGAT AACCAGTTTT ATGTTAGTAG ACACATTTGC GTTCCTTAAA ACAATCCATC TCCGGATAAT CAAACTTGAT TTnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nAAGTTCTAA
AGTTCCTTTT TTTTTTGCCT TTCTTTCCCT CTCTTTTTTG GGTTTATTTA CAGGGATGTG ATGGCTCTGT GCTACTGAAT TCAACATCTT CTAACCAAGC AGAGAAAGAT GCGTTTCCAA
ACCTGTCACT GAGAGGATAC CAAGTCATCG ACGCAGCCAA AGATRCCCTT GAAAAAAAAT GTCCTGGTGT TGTCTCTTGT GCTGATATTC TTGCTCTAGT TGCTCGTGAT GCAGTTTCCA
TGGTAATTGA TTAATTAAAG ATTCGATTCC TATTGTnnnn nnnnnnnnnn nnTCTATAAT ACTGGTCATC AACGAAAATT GTTTCATAAA TTCTATTTTT GTGATAAATC AAAATTATTT
TATCAATGAT TTCGAATGGA ATTGATTATC AAATTTTATT TCTGATGAGC GTGTGGACAA CGCAAACTGA TCAGAGTGCA AGTCATCTGC ACAGGTCATA AACTTGGACT CAACTAGTTC
ATGTGGTTTG CAGAGTGCTA CACTGnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnATTTTTCT AAATTGTTGG TTGGATAACA CAGCTAATGG
ATATGGAATT TCCTGTTTTT ACTATGAAGG TATAGAGTAA GAATATCAAA TATCTTTAAC TTGTAATTGG TTTnnnnnnn nnnnnnCATA TTGGCAAGTC CCCACAGGAA GGAGGGATGG
CAGAGTGTCT AAGCTTCAAG ATGCCTTAAA CAACTTGCCC GCTCCTACTT TCAGCATTTC TGCGCTTAAA TCGTCCTTTG CCGCGAAGGG TCTCAGCGTC AAAGACCTTG CCGTTCTCTC
AGGTACGAGA CCAATCATAG TACATATACC TAACATTATT GAAAGTCCTA ATCATTAGTT TATAATTTAA GTACAGTGAA ATTAACGGTG TGGTTGATTC GATGATAATT CAGGAGGACA
CACCCTCGGA ATGTCGCACT GTTCCTCCTT CACGAACCGT CTGTACAACT TCACTGGCAA GAACGACGCC GACCCATCCA TGGACCCCAA CTATGTCGCT CAGCTCAAGA CCAAGTGCAA
GCCGAACGAC GCCACCACCA TCGTTGAGAT GGACCCGGGG AGCGCCAAGA CGTTTGACGT GGACTACTAC ACCCTCGTCT CCAAGAGGAG AGGCCTCTTC CAGTCTGATG CCGCGCTGCT
CACCGACAGC ACCACCAAAT CCTACGTGCA GCTCCAGCTG ACGAGCAAAT CGACATTTGC CAAAGACTTT GGCGTGTCCA TGGTTAACAT GGGGAACATC GGCGTTCTCA CCGGCAATTC
GGGCGAGATT AGGAAGAAAT GCTATTTGGT TAACTAA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTGCTC AGAAGCTTCT CTCTCTCCTG GTTTTCCAGC TCGCGCTCGT CGCTTTTATT CTCGACGTCG CCAATGCTCA AGGCCTCAAA ATAGGGTTCT ACAAGAATAC GTGCCCTCAG
GCTGAGGAGA TAGTTAAGAA AGCGGCGGCG AGCTTCATTT CTCGAGCCCC CTCTCTTGCC GCTCCTCTCT TGAGGATGCA TTTCCATGAC TGCTTCGGAT GTGATGGCTC TGTGCTACTG
AATTCAACAT CTTCTAACCA AGCAGAGAAA GATGCGTTTC CAAACCTGTC ACTGAGAGGA TACCAAGTCA TCGACGCAGC CAAAGATCCC CTTGAAAAAA AATGTCCTGG TGTTGTCTCT
TGTGCTGATA TTCTTGCTCT AGTTGCTCGT GATGCAGTTT CCATGTGCAA GTCATCTGCA CAGGTCATAA ACTTGGACTC AACTAGTTCA TGTGTCCCCA CAGGAAGGAG GGATGGCAGA
GTGTCTAAGC TTCAAGATGC CTTAAACAAC TTGCCCGCTC CTACTTTCAG CATTTCTGCG CTTAAATCGT CCTTTGCCGC GAAGGGTCTC AGCGTCAAAG ACCTTGCCGT TCTCTCAGGA
GGACACACCC TCGGAATGTC GCACTGTTCC TCCTTCACGA ACCGTCTGTA CAACTTCACT GGCAAGAACG ACGCCGACCC ATCCATGGAC CCCAACTATG TCGCTCAGCT CAAGACCAAG
TGCAAGCCGA ACGACGCCAC CACCATCGTT GAGATGGACC CGGGGAGCGC CAAGACGTTT GACGTGGACT ACTACACCCT CGTCTCCAAG AGGAGAGGCC TCTTCCAGTC TGATGCCGCG
CTGCTCACCG ACAGCACCAC CAAATCCTAC GTGCAGCTCC AGCTGACGAG CAAATCGACA TTTGCCAAAG ACTTTGGCGT GTCCATGGTT AACATGGGGA ACATCGGCGT TCTCACCGGC
AATTCGGGCG AGATTAGGAA GAAATGCTAT TTGGTTAACT AA
|
Retrieve as FASTA
|
|