Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
296 (271) |
| PWM (Da): |
31487.83 (28846.5) |
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| PI (pH): |
9.23 (9.17) |
Peptide Signal: |
cut: 26 range:26-296 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASNTALKIC FVFFVCSIAS RPALAQLSNQ NYYATRCPKA NxxxxRGFNV IDTIKSKMEK LCPGVVSCAD ILAVVARDSV VEVFYY*SLT EYTFEAIQRx SFLNLYGFIE FDLQLGGRSW
QVQLGRRDST TASLNAANTN LPAPTLNLSA LITSFSNKGF TAKEMVALSG SHTIGQARCV TFRNRLYNEN DISSSFATSL KAQCPSSGGD NKLSPLDITS PTSFDSAYFS NLVSQKGLLH
SDQQLFSGGS TNAQVTTYSK NLDLFKNDFA KAMVKMGGLS PLTGSAGQIR TNCKRVN
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Retrieve as FASTA
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| Remarks |
Pseudogene from NGS. PS and fragment are missing due to NNNN. Stop in frame. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCCA ATACAGCCCT CAAAATCTGC TTCGTTTTCT TCGTTTGCTC GATCGCATCA AGACCTGCCT TGGCGCAATT GTCTAACCAA AATTACTATG CTACAAGGTG CCCAAAAGCA
CTCGATACCA TCAAATCCGC CGTGAAATCA GCAGTCGCCA AGGAGGCTCG CATGGGAGCA TCTTTACTCC GTCTTCACTT CCACGATTGC TTCGTCAATG CAAGTCTCAT TTGCTTTCTT
CCTCCGCTCT ATGTTTTTGC GCTTCACGTC GTTCTCATAC TTTTGTTGAT GTGTCGCATC CATACATTAG TGAGTACAGT AAGTTTAGTA GAAAAAATAA TTCATAGAAA ATTGTGACCA
ACGTTATGGA CATTCGCATC TGTAAGGATT TTTGCAACAA GTGAGATACA CAGGCCAATG ATTCCATTAA ATTAAGAAAG AACGGACAGT GAAACGATCA TAGCACACCA TTAGAAGACC
TGCCAACCTT GTGTCTCTAA ATTTGTCTTC TTCCTTTGTC CCTAATATTT TCTCCATATT GTATTCTATT CTAACAGACG AAACGTCTCT CTCTTAGCAT TCCTTTCCGA TTGTTGGTCG
GAAAAACAAA AACACTATTG ATTTCCTCAC AAGTCCAATA TTTGGATGAT CCTTCCTGAA TCATTGGATC TTGTAAACCC AATAAGATGA ACTATTAATG TTCTTTTTTG TAATATTTTC
TACAGAATGn nnnnnnnnnA AGGGGATTCA ACGTGATTGA CACCATCAAG TCAAAAATGG AAAAATTATG CAGTGCCCAA CCCTGGAAAT TTCTTGGAAC GTAATTTTAT TATTGATCAC
TAACGGAATA TACTTTTGAA GCAATACAAA GAnnnAGTTT CCTAAACTTA TATGGATTCA TTGAATTTGA TCTTCAGTTG GGTGGACGGA GTTGGCAAGT TCAACTAGGA AGAAGAGATT
CGACCACTGC GAGCTTAAAC GCTGCTAATA CCAACCTTCC AGCTCCAACT CTCAATCTCA GTGCCCTTAT CACCTCTTTC TCTAACAAGG GCTTCACTGC TAAAGAAATG GTGGCACTCT
CAGGATCTCA CACAATAGGC CAGGCTAGGT GTGTGACGTT CCGGAACCGA CTCTACAATG AGAATGACAT AAGCTCGTCG TTCGCCACAT CTTTAAAGGC CCAGTGCCCT AGCTCGGGAG
GTGACAACAA ACTCTCTCCT CTCGACATCA CGAGCCCGAC GTCCTTCGAC AGTGCCTACT TCAGCAACTT GGTGAGCCAA AAGGGCTTGC TTCATTCGGA CCAACAGTTG TTCAGTGGGG
GCTCGACGAA TGCTCAAGTG ACTACCTACA GCAAGAACTT GGATTTGTTC AAGAACGATT TTGCCAAGGC CATGGTCAAG ATGGGAGGCC TTAGCCCTCT CACCGGGTCT GCTGGTCAGA
TCAGGACGAA TTGTAAAAGA GTCAAT
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCCA ATACAGCCCT CAAAATCTGC TTCGTTTTCT TCGTTTGCTC GATCGCATCA AGACCTGCCT TGGCGCAATT GTCTAACCAA AATTACTATG CTACAAGGTG CCCAAAAGCA
AATGnnnnnn nnnnAAGGGG ATTCAACGTG ATTGACACCA TCAAGTCAAA AATGGAAAAA TTATGCTTTT ATTATTGATC ACTAACGGAA TATACTTTTG AAGCAATACA AAGAnnnAGT
TTCCTAAACT TATATGGATT CATTGAATTT GATCTTCAGT TGGGTGGACG GAGTTGGCAA GTTCAACTAG GAAGAAGAGA TTCGACCACT GCGAGCTTAA ACGCTGCTAA TACCAACCTT
CCAGCTCCAA CTCTCAATCT CAGTGCCCTT ATCACCTCTT TCTCTAACAA GGGCTTCACT GCTAAAGAAA TGGTGGCACT CTCAGGATCT CACACAATAG GCCAGGCTAG GTGTGTGACG
TTCCGGAACC GACTCTACAA TGAGAATGAC ATAAGCTCGT CGTTCGCCAC ATCTTTAAAG GCCCAGTGCC CTAGCTCGGG AGGTGACAAC AAACTCTCTC CTCTCGACAT CACGAGCCCG
ACGTCCTTCG ACAGTGCCTA CTTCAGCAAC TTGGTGAGCC AAAAGGGCTT GCTTCATTCG GACCAACAGT TGTTCAGTGG GGGCTCGACG AATGCTCAAG TGACTACCTA CAGCAAGAAC
TTGGATTTGT TCAAGAACGA TTTTGCCAAG GCCATGGTCA AGATGGGAGG CCTTAGCCCT CTCACCGGGT CTGCTGGTCA GATCAGGACG AATTGTAAAA GAGTCAAT
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Retrieve as FASTA
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