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Entry information : EglPrx[P]169
Entry ID 10988
Creation 2012-05-15 (Qiang Li)
Last sequence changes 2013-03-29 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2020-02-13 (Christophe Dunand)
Peroxidase information: EglPrx[P]169
Name EglPrx[P]169
Class Class III peroxidase    [Orthogroup: Prx104]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx[P]169
start..stop		 S start..stop
EcamPrx[P]169 668 0 1..339 1..339
EguPrx[P]169 585 0 40..339 1..300
EgrPrx169 565 0 1..339 1..320
EcamPrx188 530 0 1..339 1..319
Literature and cross-references EglPrx[P]169
Protein sequence: EglPrx[P]169
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339 (314)
PWM (Da):   %s   36569.1 (33781.6) Transmb domain:   %s   i42-64o (i17-39o)
PI (pH):   %s   8.54 (8.04) Peptide Signal:   %s   cut: 26 range:26-339
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASNTNRKIY FVFFVCAIAL RSALAQLSNQ DYYTQRCPRA SLFRFLAQFY PFSFMSSFVY VLHVLLRANF YFIPNPYKDY SSSTFIFDGS SHGCDASILL DDTVNFTGEK TAFPNVNSVR  GFDVIDTIKL KVEKLCPGVV SCADILAVAA RDSVVILDGP SWQVQLGRRD STTASLNDAN IDLPAPTLNL SxxxASFSNK GFTAKEMVTL SGSHTIGQAR CMTFRTRLYN ESNISPSFAM 
SLKSNCPSSG GNNNLSPLNI TSPTFFDNAY FGNLVSQEGL LHSDQQLFSG GSTNAQVAAY SKNLGSFRND FADAMVKMGG LSPLTGSSGQ IRTNCRKVN 

Retrieve as FASTA  
Remarks Pseudogene sequence from NGS. End of Exon 1 is missing (No FHDC)
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCCA ATACAAACCG GAAGATCTAC TTCGTCTTCT TTGTTTGTGC GATCGCGTTG AGGTCCGCCT TGGCGCAATT GTCTAACCAA GACTACTACA CGCAAAGGTG CCCGAGAGCA  CTGGAGACCA TCCAATCTGC TGTGAGATCG GCGGTGGCCA ACGAGACTCG CATGGGAGCA TCCTTGCTCC GACTTCACTT TCACGATTGC TTTGTCAATG CAAGTCTCTT CCGCTTTCTC  GCTCAGTTCT ATCCTTTTTC CTTCATGTCC AGTTTCGTGT ATGTTTTGCA TGTTCTTTTA CGTGCAAACT TTTACTTCAT TCCCAATCCA TATAAGGATT ACTCTTCCTC CACGTTTATT  TTCGATGGTT CCTCGCATGT CTGCTTAATT CACTCCTGAT TGAAAATGGC CAACATTTTG GAGATTCGGA TCTTTGAGGA ATATTGCAAC AAGTGAGCTA CGTGGGCCAA TGATTCCATT  AAATTAAGAA AGAACACGCA TTGAGCTGAT CATAGCACAC CATTTAGACG ACCTGCCAAT CTTGTGTCTC TGACTATGTC TTTTTTTCAT GCAATATAAA TTTGTCTCCA TATCTTATTC  TATTCTAACC GATGAATTTT CTCTCTTAAC GTTCCTTTCC GGTTGCTTGC AAAAnnAAAA AAATTATTTT GTTTCCTCAT AGGTTCAATA TTTAGATCAT CCTTTCTAGT TCGTTAGATC  TTCTAAACTT AATAAGnnnn nnnnnnnnnn nnATAGGGAT GTGATGCATC CATTCTACTA GATGACACCG TGAACTTCAC TGGGGAGAAG ACAGCGTTTC CCAACGTGAA CTCCGTGAGG  GGATTCGATG TGATTGACAC CATCAAGTTA AAAGTGGAGA AACTGTGTCC TGGCGTTGTC TCGTGCGCTG AYATCTTAGC CGTTGCTGCT AGGGACTCCG TCGTCATTGT AAGCATTGAY  ACTTGCAATT TCTTTAAACA TACAAAGAAA CTATTATTTT CCTAAACTTA TGTGGATTCA ATTAATTTGA TGTTTAGTTG GATGGnCCGA GTTGGCAAGT CCAACTGGGA AGAAGAGACT  CAACCACAGC GAGCCTAAAT GATGCTAATA TCGACCTCCC AGCTCCAACT CTTAATCTCA GCGnnnnnnn CGCCTCTTTC TCTAACAAAG GCTTTACTGC CAAAGAAATG GTAACACTAT  CAGGATCCCA CACCATAGGC CAGGCTAGGT GCATGACGTT TCGGACCCGA CTCTACAACG AGAGCAATAT AAGCCCGTCA TTCGCCATGT CTTTAAAGTC CAATTGCCCC AGCTCTGGAG  GCAACAACAA CCTATCCCCT CTCAACATCA CAAGCCCGAC GTTCTTTGAC AATGCCTACT TCGGCAACTT GGTGAGCCAA GAGGGCCTGC TTCATTCGGA TCAACAGTTG TTTAGTGGAG  GTTCGACGAA TGCTCAAGTG GCTGCCTACA GCAAAAATTT GGGTTCATTC AGGAATGATT TTGCCGATGC CATGGTCAAG ATGGGAGGCC TTAGTCCTCT TACCGGGTCT AGCGGTCAGA 
TCAGGACCAA TTGCAGAAAA GTCAATTGA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCCA ATACAAACCG GAAGATCTAC TTCGTCTTCT TTGTTTGTGC GATCGCGTTG AGGTCCGCCT TGGCGCAATT GTCTAACCAA GACTACTACA CGCAAAGGTG CCCGAGAGCA  CTGGAGACCA TCCAATCTGC TGTGAGATCG GCGGTGGCCA ACGAGACTCG CATGGGAGCA TCCTTGCTCC GACTTCACTT TCACGATTGC TTTGTCAATG CAAGTCTCTT CCGCTTTCTC  GCTCAGTTCT ATCCTTTTTC CTTCATGTCC AGTTTCGTGT ATGTTTTGCA TGGATGTGAT GCATCCATTC TACTAGATGA CACCGTGAAC TTCACTGGGG AGAAGACAGC GTTTCCCAAC  GTGAACTCCG TGAGGGGATT CGATGTGATT GACACCATCA AGTTAAAAGT GGAGAAACTG TGTCCTGGCG TTGTCTCGTG CGCTGACATC TTAGCCGTTG CTGCTAGGGA CTCCGTCGTC 
ATT 

Retrieve as FASTA