Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
298 (277) |
PWM (Da): |
31721.83 (29506.6) |
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PI (pH): |
8.32 (7.99) |
Peptide Signal: |
cut: 22 range:22-298 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
NKAALFMMLL TVCIAPTLVK GQGTRVGFYS SSCPRAEAII RSTVQAHFKS DPTVAPGLLR MHFHDCFVQG CDGSILIDGP NAEKTAGPNR LLRGYEVIDD AKTQLEAACA GVVSCADILA
LAARDSVFLT NGRSWAVPTG RRDGRVSLAS DTANLPGFRD SVDVQKQKFA DLGGGHTIGT GACQFFNYRL YNFTNTTSSG ADASIDPSFV SQLQSLCPQN GDGTRRVALD TGSPSRFDAS
FFANLRSGRG VLESDQKLWT DASTFNTEFA KSMVKMSKIG VKTGTDGEIR KICSAINA
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Retrieve as FASTA
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Remarks |
Partial sequence from NGS. 5' and PS are missing due to NNNN. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AACAAAGCCG CCTTGTTCAT GATGCTTCTT ACAGTATGCA TTGCACCAAC CTTGGTAAAA GGACAAGGTA CGAGAGTAGG GTTCTACTCA AGTTCGTGTC CGCGTGCCGA GGCCATTATT
AGGTCGACCG TTCAAGCCCA TTTCAAATCT GATCCCACCG TGGCTCCGGG GTTGTTGAGG ATGCACTTTC ACGACTGCTT TGTCCAAGGA TGCGACGGTT CCATCCTCAT CGACGGGCCC
AACGCTGAGA AAACGGCCGG TCCGAACCGT TTGTTGAGAG GATATGAAGT GATCGACGAT GCAAAGACTC AGCTCGAAGC TGCATGTGCC GGCGTCGTTT CATGTGCTGA TATTCTCGCT
CTTGCAGCCC GCGATTCCGT TTTTCTGGTA CTTTATAATC TCGTGCTTCC ATTCATAACA GATCTCCGAT ATGAGTGCAA ACCAATGTGG ATCAATTTCA TTCACTTCTA CGCAAATCTT
GGCGACGGCA ACATGATTGA TATCTTTTAA TTGCAATGAT TCTTCAAATA TTTGAGATAT CTTGAGTGAT GGGATTCATG AAATTCAATG CAGACGAATG GACGAAGTTG GGCCGTCCCG
ACGGGACGCA GAGATGGGCG AGTCTCCTTG GCATCAGATA CTGCAAATTT GCCAGGTTTC CGGGATTCAG TTGATGTGCA AAAGCAAAAG TTTGCTGACT TAGGAGTCAG TATTTTCAAT
TTGTCCCCAT TTCAATTTAC TATCCTGCAG TACACAAGTT GGCAACCAAA TGCGTTATAC TGCAGCATTT CCAAACCTAA TTATTTTTCT CCTGTCTGCT GTATCTAAGG ACAACTCCGC
CTGTCGGTAG TTGTTATGGG CATACATGGT AACATTTTTA TTTTTTTCGA TTTCTATTCT TTTGTTCTCC GAAATAAAAA AAGAACAGAA ATCTGTTTGG TAACACCAAC TTATTTTTCG
ATTCACCGGA ATAGAAAAAT AACTAGGGAA TAGATTTTAA ACAGATTTTT CTATATTTCT TTTCTTCTTC TTCCTTGTTG CGGCCACTGC TGACnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nTCGTGCGGC GGTCGTGCGG CGACAATCGT CGTAGATAAT AAATTTCTCA TATGTCCATG TGCATCAAAA GGGGTACACT AAGTTTCTTT GCTTTTGACC AATACTTGAT ACAGGAGGGC
ACACCATAGG AACTGGAGCT TGCCAATTCT TCAACTACAG ACTCTACAAC TTCACCAATA CTACGTCAAG TGGAGCGGAC GCTTCCATTG ATCCTTCCTT TGTTTCTCAA CTCCAGTCTC
TGTGTCCGCA AAACGGTGAT GGCACAAGGC GTGTTGCCCT CGACACCGGC AGCCCTAGTC GTTTCGATGC ATCCTTCTTC GCAAACTTGA GGAGCGGAAG GGGAGTTTTG GAGTCCGATC
AAAAGCTATG GACCGATGCC TCCACCAnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnACTTC AACACGGAGT TTGCTAAATC GATGGTGAAG ATGAGTAAGA
TTGGTGTGAA GACGGGGACC GATGGTGAAA TTAGGAAAAT ATGCTCCGCC ATTAATGCAT GA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AACAAAGCCG CCTTGTTCAT GATGCTTCTT ACAGTATGCA TTGCACCAAC CTTGGTAAAA GGACAAGGTA CGAGAGTAGG GTTCTACTCA AGTTCGTGTC CGCGTGCCGA GGCCATTATT
AGGTCGACCG TTCAAGCCCA TTTCAAATCT GATCCCACCG TGGCTCCGGG GTTGTTGAGG ATGCACTTTC ACGACTGCTT TGTCCAAGGA TGCGACGGTT CCATCCTCAT CGACGGGCCC
AACGCTGAGA AAACGGCCGG TCCGAACCGT TTGTTGAGAG GATATGAAGT GATCGACGAT GCAAAGACTC AGCTCGAAGC TGCATGTGCC GGCGTCGTTT CATGTGCTGA TATTCTCGCT
CTTGCAGCCC GCGATTCCGT TTTTCTGACG AATGGACGAA GTTGGGCCGT CCCGACGGGA CGCAGAGATG GGCGAGTCTC CTTGGCATCA GATACTGCAA ATTTGCCAGG TTTCCGGGAT
TCAGTTGATG TGCAAAAGCA AAAGTTTGCT GACTTAGGAG AGGGCACACC ATAGGAACTG GAGCTTGCCA ATTCTTCAAC TACAGACTCT ACAACTTCAC CAATACTACG TCAAGTGGAG
CGGACGCTTC CATTGATCCT TCCTTTGTTT CTCAACTCCA GTCTCTGTGT CCGCAAAACG GTGATGGCAC AAGGCGTGTT GCCCTCGACA CCGGCAGCCC TAGTCGTTTC GATGCATCCT
TCTTCGCAAA CTTGAGGAGC GGAAGGGGAG TTTTGGAGTC CGATCAAAAG CTATGGACCG ATGCCTCCAC CTTCAACACG GAGTTTGCTA AATCGATGGT GAAGATGAGT AAGATTGGTG
TGAAGACGGG GACCGATGGT GAAATTAGGA AAATATGCTC CGCCATTAAT GCATGA
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Retrieve as FASTA
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