View Redoxidase 1100

Entry information : OsPrx90(LOC_Os06g48030)

Entry ID	1100
Creation	2006-07-26 (Filippo Passardi)
Last sequence changes	2006-07-26 (Filippo Passardi)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2010-08-03 (Marie Brette (Scipio))

Peroxidase information: OsPrx90(LOC_Os06g48030)

Name

OsPrx90(LOC_Os06g48030)

Class

Class III peroxidase [Orthogroup: Prx137]

Taxonomy

Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons

Organism

Oryza sativa ssp japonica cv Nipponbare [TaxId: 39947 ]

Cellular localisation

N/D

Tissue types

Callus
Leaves

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	OsPrx90 start..stop	S start..stop
TaPrx54-1B	564	0	35..337	43..344
TaPrx54-1D	561	0	36..337	41..341
TaPrx54-1	561	0	35..337	41..342
HvPrx71	556	0	35..337	46..347

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1100' 'join(28667511..28667750,28667846..28668037,28669145..28669310,28669785..28670200)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	28667511..28667750	238	N° 2	28667846..28668037	190	N° 3	28669145..28669310	164	N° 4	28669785..28670200	414
join(28667511..28667750,28667846..28668037,28669145..28669310,28669785..28670200 )

Literature and cross-references OsPrx90(LOC_Os06g48030)

Literature	Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
Protein ref.	UniProtKB: Q5Z8H5
DNA ref.	GenBank: NC_008399.1 (28667511..28670197)

Protein sequence: OsPrx90(LOC_Os06g48030)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	337 (304)
PWM (Da):	35928.4 (32523.5)	Transmb domain:	i13-35o
PI (pH):	9.09 (8.38)	Peptide Signal:	cut: 34 range:34-337

Sequence
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Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGQRRRSGPRRQSQSVVVVVVAVLLATASCAAAQLSQSYYASTCP
NVETLVRGAVTQKLKETFNAAPGTLRLFFHDCFVRGCDASVLIAGPDDEHSAGADTTLSPDALDLITRAKAAVDADAQCANKVSCADILALAARDVVSQAGGPYYQVELGRLDGKVGTRAVVKHSLPGAAFDLDQLNKLFATNGLTQTDMIALSG
GHTIGVTHCDKFVRRLYQFKGAAPQYSPPMNLAFLRQMRQTCPLSYSPTTVAMLDAVSPNKFDNGYFQTLQQLKGLLASDQVLFADRRSRATVNYFAANQTAFFDAFVAAITKLGRVGVK
TAAGSDAEIRRVCTKVN

Retrieve as FASTA

Remarks

chromosome 6. 17 ESTs.
Rice blast fungus interaction.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGGCAGAGGAGGAGGTCGGGGCCGCGGCGTCAGAGCCAGAGCGTGGTGGTGGTGGTGGTCGCCGTGTTGCTGGCGACGGCGTCCTGCGCGGCGGCGCAGCTGAGCCAGAGCTACTAC
GCGTCGACGTGCCCCAACGTGGAGACGCTCGTCCGCGGCGCCGTCACGCAGAAGCTCAAGGAGACCTTCAACGCCGCGCCTGGGACGCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGG
GGGTACAGTAGTGACAGACCAGCCCGAGAACTTGATGCCATCGACTCCGTGTTCTTCGTGTTGCTGATCGTGCCGTGTCGTGCTCGTGCGTGTGCAGGGGTGCGACGCGTCGGTGCTGAT
CGCGGGGCCGGACGACGAGCACAGCGCGGGCGCGGACACGACGCTGTCGCCGGACGCGCTGGACCTCATCACCCGCGCCAAGGCCGCCGTCGACGCCGACGCCCAGTGCGCCAACAAGGT
CTCCTGCGCCGACATCCTCGCCCTCGCCGCCCGCGACGTCGTCTCCCAGAGGTAAACACACCCACACCATCCCCTCTCTCTCTCTCTCTCGGCGTGCGCGCGCGTGCCGCTTCGAGTGCG
CTCGCTTGAGAGAAAACTTCGCTTTCGCCCGTAGTTTTTGCCGTTTTTTCACCGTGCGCGCGCGACAGCGATGATGAGGGTGACATGCCATGCCGCCCCGCACGGCGCCGCAGCGTGTTC
CCGGCTCGGCACGAGTCCACGCTCTTAGCTGTGCGGCAATTATGCGCCTCTCGCTGTGCGCTTCGTTATATCGATCGGTCCGGTGCTTTGCTACACTAAACAGAAGCCCAAAATACTCCA
CAGAAGCAAGCCAAGCAGAGAATTCATTCACCTAACCGAATGGAATCGGAAAAATTGGGATTTGGCGCTAAAATTCGCGAGGCCGAGGGAGGTGGTCCCCCCTAGCATGTCCGAATTCAG
CTGTCCTATTAATTCAGAGCAGGGTGTCCATGTAACCACCACTGCATAGTGGTCGTCGTCTCGTCAGCGAGAGTTACTGCGATGTCGTTGCTTTGGTCTTTCTTCTTCTCCGATTGGATC
CATCAATTCTTTTTTCTCCAGCGTGAAAAACAAGTATAGGCCGAATTTAGTTCCAAAGTTTTTTTTTAAACTTCCAACTTTTCCATCCCATTAAAACTTTTCTACACACAAACTTCCAAC
TTTTTCATCACTTTATTTCAATTTCAATCAAACCTCTAATTTTAGCGTCAACTAAACACACCGTTCAAATCTACTACTACTCCTACGCGGTATGGGTTGGGGCGCTTAAATGAGCCGCGC
GCGTACGTACGGTACGGCGATACAGAAGCAGAGACGCCGGCGTCCAACACGTACCTACCAAACCAGCCACGCTCTCGACAGTCGACAGGCAGGCTGTGGACTCGTAGAGCTACGGAAATC
TGCCAATTATTATTAGGCCATGCCGAAAATTCTGCTCGCACACACACACACACTCGTGAGTAGTTGCAGTTGATGGCAAGAACGGCGTGCTGTAGTAGCAGTAAAATTGCTTGGATTTCA
CTGCAAGGCAAAGGCAAAAGTTGTATGATGTGTCATGTGTGGTGGTAATCACAGTGGTGGTGGTTGTCGTTGATGCAGGCAGGAGGACCCTACTACCAGGTGGAGCTGGGGCGGCTTGAC
GGCAAGGTCGGGACGCGCGCCGTGGTGAAGCACAGCCTCCCCGGCGCCGCCTTCGACCTCGACCAGCTCAACAAGCTCTTCGCCACCAACGGCCTCACCCAGACCGACATGATCGCCCTC
TCAGAGGTATCAAAAACATGACAAATTTTACAGTACCAAAATTTTGTATTCTGAGTGCCAAATTCTACACTAGAAAATATAACAATCTAAAACCGGATGTGACACTTTATAGTACAACGA
ATCTGGACAGAAAACATATCTAGATTCGTTATACTATGAAGTGTCTCGTTCGGTACTAGATTGCTATATTATAGGACGGAGAGAGTATCTTCTTAAGAATTATAAAATCACTCTAAATCG
CTATAAAATTGGGAATTCTCGGTGTTAAATGTTACAATAGAATAGAATATATGGTATCTTGGAGTATCTTGAGCTATATCTTCTTAAAAATTGTAAAATCACTCTAAAAACGTACTAACA
CAAATTCCTTTTTATAAAATCAAATTCTAAAACTAATTTATAAAATTCAAATGAACTTTTGGGTGAATCTGTTTTCATCGTCTGCTTGTTAGCTTATCAGTCGTAACGAATGTGGTGCAG

GAGGGCACACGATAGGGGTGACGCACTGCGACAAGTTCGTGCGGCGGCTGTACCAGTTCAAGGGGGCGGCGCCGCAGTACAGCCCGCCGATGAACCTGGCGTTCCTGCGGCAGATGAGGC
AGACGTGCCCGCTCAGCTACAGCCCGACCACCGTCGCCATGCTCGACGCCGTCTCGCCCAACAAGTTCGACAATGGCTACTTCCAGACGCTGCAGCAGCTCAAGGGCCTCCTCGCCTCCG
ACCAGGTGCTCTTCGCCGACCGCCGCTCGCGCGCCACCGTCAACTACTTCGCCGCCAACCAGACCGCCTTCTTCGACGCCTTCGTCGCCGCCATCACCAAGCTCGGCCGCGTCGGCGTCA
AGACGGCCGCCGGCTCCGACGCCGAGATCCGGCGAGTCTGCACCAAGGTCAACTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA