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Entry information : AtrPrx19(AmTr_v1.0_scaffold00007.291)
Entry ID 11004
Creation 2016-03-23 (Christophe Dunand)
Last sequence changes 2016-03-23 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2020-11-09 (Christophe Dunand)
Peroxidase information: AtrPrx19(AmTr_v1.0_scaffold00007.291)
Name AtrPrx19(AmTr_v1.0_scaffold00007.291)
Class Class III peroxidase    [Orthogroup: Prx037]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx19
start..stop		 S start..stop
GmPrx324 387 4e-136 7..303 28..327
GmPrx166 382 2.94e-134 7..303 28..327
MtPrx93 380 1.65e-133 8..303 29..327
GbPrx82 377 1.36e-132 6..303 10..306
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..159 157 N° 2 995..1352 356 N° 3 1585..1979 393  
join(1..159,995..1352,1585..1979)


exon

Literature and cross-references AtrPrx19(AmTr_v1.0_scaffold00007.291)
Cluster/Prediction ref. Genebank:   18433660
Protein sequence: AtrPrx19(AmTr_v1.0_scaffold00007.291)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   303 (324)
PWM (Da):   %s   33321.67 (35357.7)  
PI (pH):   %s   7.12 (4.77) Peptide Signal:   %s   cut: 27 range:27-350
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDVTLANLSYDHYHNSCPHLESLVAKTLMPIFLTDPTSPSAFLRL
MFHDCQVQGCDASILLDSNGESISSEMLSGRNFGIRRREAIDMVKRVVEAECPTQVSCADLIILAARESVAFAGGPRIRVPLGRRDSTTASNRRADTYIPSSTVSVDNMLRIFMSKGMTMDEAIAILG
GHTLGVSHCINVVNRLYPSYESEKLGAFGIYLRLNCPTMAPLTNLTFIPNDLTPFVFDNHYYKDLKAGRGLLSIDSSISTDPRTAPIVDRFSRDSDYFFFTFSSAFVKLSTVGVPTGKQG
QIRNQCSQLN

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATGTAACCTTGGCCAACCTTTCATATGATCACTACCACAACTCATGCCCCCATCTAGAGAGCCTGGTAGCAAAAACACTCATGCCTATCTTCCTAACTGATCCCACCTCTCCCTCT
GCATTCTTAAGGCTCATGTTCCATGATTGCCAAGTTCAGAGGTATTCACTCTCTTTGATTTGCAATTTTCGCGGCTATTTTTTTTTTTTTTGGTAATTCAGTGGAGAAGACGGGTCGCTA
CTTTTTTTTTAAAAAGTTTAATAGTTAAGTTGTTTGGAAGGTATTTGTAGGGTGGCCTTTACCCGTTTTTTCAAATAGTTTAAGAATGAGTTTTTTTTTAAGTTGTTCGTAAGGTAGTGT
TAGTGAGAATGAAAACACAACGTTGTGACTAAGATGGGGGATGCTACCATCAAGACTTAGCCCCTTTCCCAAAGTCCGTGCTTCTCTCTCTCTCATTTGCACTTTTCATGACTATTATTA
CTCCTTTTATTCTGGGAAGGTACAATGCTCCTTAAAACTACTACATATAGACAGATCCTTAAGGCAAGTTTATTTCACTTGAAAGGGCTCTCGCAAAGTTTGTTCATTGAGAGAGCTTTC
CTATTAGCCTGAAAAAGCGCTTCACACTTAAATAGATAAAACGCTGCTTTTCCACTAAAAGTGAGGAAAGTTTGAGAAGCACTTTCGTTGCTTCTAAGCAACACCCACTTTCCCATAACA
AACGTGGGGAAACAGTAGTCTAGCGCAAACGAACTTTCACAAGTTCTTTTCCGCTAAAACTAATGTGTCTTTAAGGTCATCAGAGTCCACCTAACTAGTGAAAGGTGATGAAGAGCCCAC
AATTAGCATCTATCATGTCTTTTTCCAGTGGATCACACTCACTCTCTATAATCACTGGTCATTTTCATGCAATTTTCGTAGTCCTTATGATCATAGTATACTACTTTCCTTCCCACAAAT
TCATGAAGTGTTAGATTGATTATAAAGAGTTTACAGGGTTGTGATGCCTCCATACTGTTGGATTCGAATGGCGAAAGCATAAGCTCTGAGATGCTTTCCGGAAGAAACTTCGGCATAAGG
AGGAGAGAAGCCATCGACATGGTGAAGAGAGTGGTGGAGGCCGAGTGTCCTACTCAGGTCTCTTGCGCTGATCTCATAATTCTGGCTGCTAGAGAATCGGTGGCCTTCGCTGGAGGACCG
CGGATTCGAGTTCCACTGGGTAGGAGGGATTCCACCACTGCAAGCAATCGAAGAGCTGACACCTATATTCCTTCATCTACGGTTAGTGTAGACAACATGCTTCGCATTTTCATGAGCAAA
GGGATGACAATGGATGAAGCAATCGCCATTCTAGAGGTAAAAAAAAAAAGAAGAAGCAATATTACAGTAATGGAGAATTACTAACATGAAAAGCCTTACCTCATTGCTACATGTTAAATG
CATCATTAAGCAACTGCAGTAACAACTTACGGTTCGGGATGCATGAAGCATGGTGTTGCTCTGGTAAAGGCTATCATGTTATACAGATAACAATATTGATTAATCATGGTAATTGCAATG
GTGATGGTGAAATTAAGGATTTTTGCAGGTGGGCATACACTGGGAGTGAGCCACTGCATAAATGTTGTGAATCGGTTGTATCCGTCTTATGAGAGCGAGAAACTAGGGGCTTTTGGAATA
TATCTACGACTGAATTGCCCGACAATGGCTCCCTTAACAAACCTAACCTTCATTCCTAATGATCTTACGCCTTTCGTATTCGACAATCATTACTATAAGGACCTCAAGGCGGGTAGAGGC
TTATTGAGCATCGATTCAAGCATATCTACAGACCCTCGAACGGCTCCAATTGTTGACAGGTTCTCTAGAGACAGTGACTACTTCTTCTTCACCTTCTCTTCAGCTTTTGTTAAGCTTTCA
ACCGTGGGTGTTCCTACAGGAAAACAAGGACAGATACGAAACCAGTGCAGCCAGCTCAATTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATGTAACCTTGGCCAACCTTTCATATGATCACTACCACAACTCATGCCCCCATCTAGAGAGCCTGGTAGCAAAAACACTCATGCCTATCTTCCTAACTGATCCCACCTCTCCCTCT
GCATTCTTAAGGCTCATGTTCCATGATTGCCAAGTTCAGGGTTGTGATGCCTCCATACTGTTGGATTCGAATGGCGAAAGCATAAGCTCTGAGATGCTTTCCGGAAGAAACTTCGGCATA
AGGAGGAGAGAAGCCATCGACATGGTGAAGAGAGTGGTGGAGGCCGAGTGTCCTACTCAGGTCTCTTGCGCTGATCTCATAATTCTGGCTGCTAGAGAATCGGTGGCCTTCGCTGGAGGA
CCGCGGATTCGAGTTCCACTGGGTAGGAGGGATTCCACCACTGCAAGCAATCGAAGAGCTGACACCTATATTCCTTCATCTACGGTTAGTGTAGACAACATGCTTCGCATTTTCATGAGC
AAAGGGATGACAATGGATGAAGCAATCGCCATTCTAGGTGGGCATACACTGGGAGTGAGCCACTGCATAAATGTTGTGAATCGGTTGTATCCGTCTTATGAGAGCGAGAAACTAGGGGCT
TTTGGAATATATCTACGACTGAATTGCCCGACAATGGCTCCCTTAACAAACCTAACCTTCATTCCTAATGATCTTACGCCTTTCGTATTCGACAATCATTACTATAAGGACCTCAAGGCG
GGTAGAGGCTTATTGAGCATCGATTCAAGCATATCTACAGACCCTCGAACGGCTCCAATTGTTGACAGGTTCTCTAGAGACAGTGACTACTTCTTCTTCACCTTCTCTTCAGCTTTTGTT
AAGCTTTCAACCGTGGGTGTTCCTACAGGAAAACAAGGACAGATACGAAACCAGTGCAGCCAGCTCAATTAG

Retrieve as FASTA