Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
435 |
PWM (Da): |
48815.05 |
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PI (pH): |
6.8 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GPILLDDYHL VEKLANFDRx xxxxxxVHAR GASAKGFFEV THDISHLTRA DFLQAPGVQT PVNVRFSILI HERGGPETLR DPRGSDVKFY TREVRETSRG KQFPVFFIND GMKFPDIFRA
LEPDPKSHVQ ENWRILDFFS HHPESFRMFT FLFDDIGIAQ DCRHTEGSGV TxYTFINEAR KAHHVKFHWK PTCGVKSLLE EEAIRVGGFN HSHTTRDLYD SIAAGNYPEW ELFIQIVDPD
HEDKFDFDPL DMTxxxPEDI LPLMPVRRLV LNRNIDNFFA ENEHLAFCPS IVVPGVYCLD DWLLQTRMFS YSDTHRHRLG PNYLQxPPNA LKCAYHNNHH EGFMNFMHRD EEVNYFLSRY
DPVRHAGRYx IPPAMLTGKR EKQTITEKEN NFKQPGERYR PWTPDRYPSV SCKRSSSADG SMMRSAASGF HTGLR
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Retrieve as FASTA
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Remarks |
Pseudogene sequence from NGS. Short 5' end is missing. No EST. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGTCCAATTC TTCTTGACGA TTATCACCTT GTGGAGAAAC TTGCCAACTT TGATAGGGAn nnnnnnnnnn nnnnnTnnGT CCATGCCAGG GGAGCCAGTG CAAAGGGATT CTTTGAGGTC
ACTCATGACA TTTCTCACCT TACTCGTGCC GATTTCCTTC AGGCACCAGG AGTTCAAACA CCTGTGAATG TCCGTTTCTC CATCCTCATC CACGAAAGGG GTGGCCCTGA AACCCTGAGG
GACCCTCGGG GTTCTGATGT GAAGTTCTAT ACAAGAGAGG TAAGGGAGAC ATGAATGTGC AGCATGGACG AGCACGAGTA TGATGCTCCC TGTGATGAAT CCTTTCACAG GTGGCCTAAA
CTCAACCGAT GCATATCGCA GTTCTCTTGT CCACATTGCA TACATTTGTT TTGCTGCACT TTGCTGTGTG ATCTTACCTT TTCCGTTACT ACAGGGTACC TTTGATCTCG TGGGAAACAA
TTCCCCGTCT TCTTTATCAA CGATGGGATG AAATTTCCAG ATATTTTTCG TGCACTTGAA CCAGACCCCA AATCCCACGT CCAGGAGAAC TGGAGGATCC TTGACTTTTT CTCCCACCAT
CCCGAGAGCT TTCGCATGTT CACCTTCCTC TTTGATGACA TTGGTATTGC ACAAGATTGC AGGCACACGG AGGGCTCTGG AGTTACACCn TACACTTTTA TCAACGAGGC TAGAAAAGCG
CATCATGTGA AGTTCCACTG GAAACCAACT TGCGGGGTCA AGAGCTTGCT GGAGGAAGAG GCAATTAGAG TTGGTGGATT CAATCACAGC CATACAACTC GGGATCTTTA TGATTCCATT
GCTGCCGGAA ACTATCCTGA GTGGGAACTT TTCATTCAGA TTGTCGATCC TGATCATGAA GACAAATTCG ACTTTGACCC ACTTGATATG ACTAAnnnnn GGCCCGAAGA CATATTGCCC
CTAATGCCAG TTCGCCGCTT GGTCTTGAAT AGGAACATTG ATAACTTCTT TGCTGAGAAT GAACATCTTG CATTTTGCCC TTCAATTGTG GTTCCCGGCG TCTACTGCTT AGATGATTGG
CTGCTTCAAA CTCGTATGTT CTCATATTCT GATACTCACA GGCACCGCCT TGGACCAAAT TATCTTCAAC TnCCCCCTAA TGCTCTTAAA TGTGCTTATC ACAATAATCA CCACGAAGGT
TTCATGAATT TCATGCATAG GGATGAAGAG GTAAGAATTT TCTTTGAATC CTACCGCAGC GATACTCTGG GTCGCGTCTC TTGTGGATTT TTTGTCGACG TAACTAAGGC ATCACGCTTT
CCTTGAAGTA TGAAGGCGTA GTGATGCAAT CTGACGTGTC CATTACAGAT CCCAAAGTGG CAGTGCGAAT GTCCTCTCTC CTTGTTAGCG GAGATGTAGG AAATTCCTGT CTGTTATTAT
GTAAAATGAT GGATTATCTG TTGAGCAAAT GCTTAATTTC CCTTTTGCAG ATAAAACTAT TTTCTTTCAA GGTATGATCC CGTTCGTCAT GCAGGGAGAT ATCCnATTCC ACCTGCTATG
CTGACTGGAA AGCGTGAAAA GGTATGTTTC ATAATCCTAT TTTACTTGAA TAGAGATTGA TTGCTTGAGG TGCTTTCATG TTGGTATCGA TGGGATGGAC TCAGCTTGTC CTGTAAATAA
TCAATTGAAT TGCAGTGAGT GGTATGACCG ATGTATGTGT GTTTGGATTT TGTTAATTTT TGTTGGTCCA CACAGACTAT CACTGAGAAA GAGAACAACT TCAAGCAGCC CGGAGAGAGA
TACCGACCAT GGACGCCTGA CAGGTATCCT TCAGTCGTGC ATTTCCTGAT AATGGTGTGA TGGTCTCATG TAAGAGAAGT TCATCTGCCG ATGGATCGAT GCTTTGTCTG ACCCACGTGT
GACTCATGAG ATCCGCAGCA TCTGGATTTC ATACTGGTCT CAGGTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGTCCAATTC TTCTTGACGA TTATCACCTT GTGGAGAAAC TTGCCAACTT TGATAGGGAn nnnnnnnnnn nnnnnTnnGT CCATGCCAGG GGAGCCAGTG CAAAGGGATT CTTTGAGGTC
ACTCATGACA TTTCTCACCT TACTCGTGCC GATTTCCTTC AGGCACCAGG AGTTCAAACA CCTGTGAATG TCCGTTTCTC CATCCTCATC CACGAAAGGG GTGGCCCTGA AACCCTGAGG
GACCCTCGGG GTTCTGATGT GAAGTTCTAT ACAAGAGAGG TAAGGGAGAC ATCTCGTGGG AAACAATTCC CCGTCTTCTT TATCAACGAT GGGATGAAAT TTCCAGATAT TTTTCGTGCA
CTTGAACCAG ACCCCAAATC CCACGTCCAG GAGAACTGGA GGATCCTTGA CTTTTTCTCC CACCATCCCG AGAGCTTTCG CATGTTCACC TTCCTCTTTG ATGACATTGG TATTGCACAA
GATTGCAGGC ACACGGAGGG CTCTGGAGTT ACACCnTACA CTTTTATCAA CGAGGCTAGA AAAGCGCATC ATGTGAAGTT CCACTGGAAA CCAACTTGCG GGGTCAAGAG CTTGCTGGAG
GAAGAGGCAA TTAGAGTTGG TGGATTCAAT CACAGCCATA CAACTCGGGA TCTTTATGAT TCCATTGCTG CCGGAAACTA TCCTGAGTGG GAACTTTTCA TTCAGATTGT CGATCCTGAT
CATGAAGACA AATTCGACTT TGACCCACTT GATATGACTA AnnnnnGGCC CGAAGACATA TTGCCCCTAA TGCCAGTTCG CCGCTTGGTC TTGAATAGGA ACATTGATAA CTTCTTTGCT
GAGAATGAAC ATCTTGCATT TTGCCCTTCA ATTGTGGTTC CCGGCGTCTA CTGCTTAGAT GATTGGCTGC TTCAAACTCG TATGTTCTCA TATTCTGATA CTCACAGGCA CCGCCTTGGA
CCAAATTATC TTCAACTnCC CCCTAATGCT CTTAAATGTG CTTATCACAA TAATCACCAC GAAGGTTTCA TGAATTTCAT GCATAGGGAT GAAGAGGTAA ACTATTTTCT TTCAAGGTAT
GATCCCGTTC GTCATGCAGG GAGATATCCn ATTCCACCTG CTATGCTGAC TGGAAAGCGT GAAAAGCAGA CTATCACTGA GAAAGAGAAC AACTTCAAGC AGCCCGGAGA GAGATACCGA
CCATGGACGC CTGACAGGTA TCCTTCAGTC TCATGTAAGA GAAGTTCATC TGCCGATGGA TCGATGATGA GATCCGCAGC ATCTGGATTT CATACTGGTC TCAGGTGA
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Retrieve as FASTA
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