Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
405 |
| PWM (Da): |
45073.39 |
Transmb domain: |
i21-43o |
| PI (pH): |
9.06 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASEVTSPLA RRQR*FRVKA YWSFLAFHPY TSFYCWCVAI SMCIGRNYSS AVHARGACAK GFFEVTHDIS HLTRADFLQA PGVQTPVTVR FSILIHVRSG PESLRDPRGS HVNFYTSGEG
RFDLVGDNFP IFFICDGMKF PDMVRALRPN PKSRVQENWR ILDFFFHHPK SLRSFTFLFD DIGSAQDYRH MQGSGVHTYT LINKARKAHH VKFHRKPTCG SRxxxxxxxL AGGRGN*SRG
IQSQPCNFGF YDSIAAGNYP EWKLFVQILD PDHENKFDFG PLDGAKTWPE DMLPLMPVGR LVLNRNIDNF FAENEQLAFL PFNCSSILIL GGTVLDQNII NSHPPPPPxL FPPxTRKCAH
HNSHPEGFAN FMHRDEEINY FPSRYDPVRH GERYPIPPAM LTGKHEK
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Retrieve as FASTA
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| Remarks |
Pseudogene from NGS. 3' and PS are missing due to NNNN. Stop in frame. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCAGTG AGGTCACCTC ACCTCTGGCC CGTCGCCAGC GATAATTCCG AGTCAAGGCA TATTGGAGTT TTCTGGCTTT TCATCCTTAT ACATCATTCT ACTGTTGGTG TGTAGCCATT
AGCATGTGCA TAGGAAGAAA TTACTCGGTG AACTACTCTG AGTCAAGGCA TATTGGAGTT AAAAATATGC AGAGAGACGC AATAGAACCT AATTTTAGAG TAATGCTAAA TGTGGAATAT
GCTTATGGCA AACTATCATC TACGTCACAG GTCCAATTCT TCTTGACGAA TATCACCTTG TGGAGAAACT TGCCAACTTT GATAGGGAGA GGATTCCATA GAGTGCTGTC CATGCCAGGG
GAGCCTGTGC AAAGGGATTC TTTGAGGTCA CTCATGACAT TTCTCACCTT ACCCGTGCTG ATTTCCTTCA GGCACCAGGA GTTCAAACAC CTGTGACTGT CCGTTTCTCC ATCCTCATCC
ACGTAAGGAG CGGCCCTGAA AGCCTGAGGG ACCCCCGGGG TTCTCATGTG AACTTCTACA CGAGTGGTGA GGGTCGTTCT GGTAGTAGAC ATGAATGGGC AGCATGGACG GGCACGAGTA
TGATGCTCCC TGTGATGAAT CCTTTCACAG GTGGCCTAAA CTCGACCGAT GCATATGGCA GTTCTCTTGT CCACATTGCA TATATTTGTT TTGTTGTACT TTGCTATGTG ATCTTACCTT
TTCTGTTACT GCAGGGTAAC TTTGATCTGG TAGGAGACAA TTTCCCTATC TTCTTTATCT GCGATGGGAT GAAATTCCCG GATATGGTTC GTGCACTTAG ACCAAACCCC AAATCCCGCG
TCCAGGAGAA CTGGAGGATC CTTGACTTTT TCTTCCACCA TCCCAAGAGC TTGCGCTCGT TCACCTTCCT CTTTGATGAT ATTGGTAGTG CACAAGATTA CAGGCACATG CAGGGCTCTG
GAGTTCACAC CTACACTTTG ATCAACAAGG CCAGAAAAGC GCATCATGTG AAGTTTCACC GGAAACCAAC TTGCGGGTCA AGAGnnnnnn nnnnnnnnnn nnnnCTTGCT GGAGGAAGAG
GCAATTAGAG TCGGGGAATC CAATCACAGC CATGCAACTT TGGATTTTAT GATTCCATTG CTGCTGGAAA CTATCCTGAA TGGAAACTTT TCGTTCAGAT CCTCGATCCT GATCATGAAA
ACAAATTCGA CTTTGGCCCA CTTGATGGGG CTAAGACCTG GCCCGAGGAC ATGTTGCCCC TAATGCCAGT TGGCCGCTTG GTCTTGAATA GGAACATTGA TAACTTCTTT GCTGAGAACG
AACAGCTTGC ATTTTTGCCC TTCAATTGTA GTTCCAGGCG TCTACGATTC TGATGATAAG CTACTCCAAA CTCGTCATCT CATATTCTGA TACTCGGAGG CACCGTCTTG GACCAAAATA
TCATCAACTC CCACCCCCCC CCCCCCCCnn TCCTTTTCCC CCCCAAnACT CGTAAATGCG CTCACCACAA CAGTCACCCT GAAGGTTTCG CGAATTTCAT GCATAGGGAT GAAGAGGTAA
GAATCGTCTT AGAATACTTC AGCAGCGATG CTCTGGGCAG CATCTCTTGT GGATTTTGTT TTGATGGAAC TAGACATCGT GCTTTCCTAT AAGCATTGTA GGCGTTGTGA TGCAATCTGA
CATGTCAATT GCGGATCCTA AAGTGGCAGT GCGAATGTCC TCCCTCTTTT TGAGGATTTC CCTGTTGCAG ATAAACTATT TTCCATCAAG GTATGATCCC GTTCGTCATG GAGAGAGGTA
TCCCATTCCA CCTGCTATGC TGACTGGAAA GCATGAAAAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCAGTG AGGTCACCTC ACCTCTGGCC CGTCGCCAGC GATAATTCCG AGTCAAGGCA TATTGGAGTT TTCTGGCTTT TCATCCTTAT ACATCATTCT ACTGTTGGTG TGTAGCCATT
AGCATGTGCA TAGGAAGAAA TTACTCGAGT GCTGTCCATG CCAGGGGAGC CTGTGCAAAG GGATTCTTTG AGGTCACTCA TGACATTTCT CACCTTACCC GTGCTGATTT CCTTCAGGCA
CCAGGAGTTC AAACACCTGT GACTGTCCGT TTCTCCATCC TCATCCACGT AAGGAGCGGC CCTGAAAGCC TGAGGGACCC CCGGGGTTCT CATGTGAACT TCTACACGAG TGGTGAGGGT
CGTTTTGATC TGGTAGGAGA CAATTTCCCT ATCTTCTTTA TCTGCGATGG GATGAAATTC CCGGATATGG TTCGTGCACT TAGACCAAAC CCCAAATCCC GCGTCCAGGA GAACTGGAGG
ATCCTTGACT TTTTCTTCCA CCATCCCAAG AGCTTGCGCT CGTTCACCTT CCTCTTTGAT GATATTGGTA GTGCACAAGA TTACAGGCAC ATGCAGGGCT CTGGAGTTCA CACCTACACT
TTGATCAACA AGGCCAGAAA AGCGCATCAT GTGAAGTTTC ACCGGAAACC AACTTGCGGG TCAAGAGnnn nnnnnnnnnn nnnnnnnCTT GCTGGAGGAA GAGGCAATTA GAGTCGGGGA
ATCCAATCAC AGCCATGCAA CTTTGGATTT TATGATTCCA TTGCTGCTGG AAACTATCCT GAATGGAAAC TTTTCGTTCA GATCCTCGAT CCTGATCATG AAAACAAATT CGACTTTGGC
CCACTTGATG GGGCTAAGAC CTGGCCCGAG GACATGTTGC CCCTAATGCC AGTTGGCCGC TTGGTCTTGA ATAGGAACAT TGATAACTTC TTTGCTGAGA ACGAACAGCT TGCATTTTTG
CCCTTCAATT GTAGTTCCAT TCTGATACTC GGAGGCACCG TCTTGGACCA AAATATCATC AACTCCCACC CCCCCCCCCC CCCnnTCCTT TTCCCCCCCA AnACTCGTAA ATGCGCTCAC
CACAACAGTC ACCCTGAAGG TTTCGCGAAT TTCATGCATA GGGATGAAGA GATAAACTAT TTTCCATCAA GGTATGATCC CGTTCGTCAT GGAGAGAGGT ATCCCATTCC ACCTGCTATG
CTGACTGGAA AGCATGAAAA G
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Retrieve as FASTA
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