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Entry information : Egl1CysPrx03-2
Entry ID 11045
Creation 2012-05-21 (Qiang Li)
Last sequence changes 2013-03-13 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-03-13 (Qiang Li)
Peroxidase information: Egl1CysPrx03-2
Name Egl1CysPrx03-2
Class 1-Cysteine peroxiredoxin     [Orthogroup: 1CysPrx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Egl1CysPrx03-2
start..stop		 S start..stop
Egu1CysPrx03 250 1.72e-86 1..137 40..220
Egr1CysPrx03 250 1.72e-86 1..137 40..220
Ecam1CysPrx03-2 250 2.16e-86 1..137 40..220
Ecam1CysPrx03-1 243 8.73e-84 1..134 40..217
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11045' 'join(1..47,96..150,510..653,783..872,954..1031)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..47 45 N° 2 96..150 53 N° 3 510..653 142 N° 4 783..872 88
N° 5 954..1031 76  
join(1..47,96..150,510..653,783..872,954..1031)


exon

Literature and cross-references Egl1CysPrx03-2
Protein sequence: Egl1CysPrx03-2
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   137
PWM (Da):   %s   15025.77 Transmb domain:   %s   i352-374o389-411i431-453o495-517i524-543o548-567i
PI (pH):   %s   7.6
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GDFTPVCTTELGKMAAxDEVESHKAWIKDIEAFTGAKVTYPIIADPNREIIKQLNMVEPEEKDASGKQVPSRALHIVGPDKKIKLSFLYPASTGRNMDEVVRVLESLQRATxEMFPQGYK
TANLPSKKDYLRFTHVD

Retrieve as FASTA  
Remarks Partial sequence from NGS. 5' end and PS are missing due to NNNNN in DNA.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGGGATTTCACGCCGGTGTGCACGACGGAGCTCGGGAAGATGGCGGCGCGTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGACGAGGTCGAGTCGCACA
AGGCGTGGATCAAGGACATAGAGGCCTTCACCCCGTCAGCTACTCTTCTCCCTATTAAACCTTTTTTTTATCACTTGGCACATATGTATATGTCTTGTAGGAACTTGCTTTTTGGGATTT
CGATGTTGTGTTTTATCTGGTTATGGTGATAGTATCCTTCAGAAAGAAAAAGAAAGAGAACTTATAGGAATGTGTAGTATTATGATTTAGTAGAGTGACCAAGGGAAGTCTCCTTAATCT
TAGGCACAATTTGGGTAGAATGAGGTGGTTTAATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTGCTAAGGTGACGTACCCGATAATTGCCGACCCGAATAGAGAGATAATCAAACAGCTCAACATGGTCGAGCCTGAGGAGAAAGAC
GCCTCCGGGAAGCAAGTCCCTTCTAGAGCTCTGCACATCGTCGGTCCTGATAAGAAGAGGTATACGTGCTCCTCTTAACTTTTCTATTCCGTGTTAATTAAACTTTTATCGGATGAAACA
AATTGCATAAACCAATGTCATCTCATGCATGTCGTTTTCGGTTTCACGATATAACATAAATTGTATAGATCAAGCTGAGTTTTCTGTACCCGGCGAGCACGGGGAGGAACATGGACGAGG
TGGTGAGGGTGCTGGAATCGCTGCAGAGGGCGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAA
GGAGATGTTCCCGCAGGGCTACAAGACCGCCAATCTCCCGTCCAAGAAGGATTACCTCCGCTTCACTCATGTTGATTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGGGATTTCACGCCGGTGTGCACGACGGAGCTCGGGAAGATGGCGGCNNGCGACGAGGTCGAGTCGCACAAGGCGTGGATCAAGGACATAGAGGCCTTCACCGGTGCTAAGGTGACGTAC
CCGATAATTGCCGACCCGAATAGAGAGATAATCAAACAGCTCAACATGGTCGAGCCTGAGGAGAAAGACGCCTCCGGGAAGCAAGTCCCTTCTAGAGCTCTGCACATCGTCGGTCCTGAT
AAGAAGATCAAGCTGAGTTTTCTGTACCCGGCGAGCACGGGGAGGAACATGGACGAGGTGGTGAGGGTGCTGGAATCGCTGCAGAGGGCGACGANNGAGATGTTCCCGCAGGGCTACAAG
ACCGCCAATCTCCCGTCCAAGAAGGATTACCTCCGCTTCACTCATGTTGATTAG

Retrieve as FASTA