View Redoxidase 11108

Entry information : BnaCcP04

Entry ID	11108
Creation	2012-06-04 (Christophe Dunand)
Last sequence changes	2012-06-04 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-06-04 (Christophe Dunand)

Peroxidase information: BnaCcP04

Name

BnaCcP04

Class

Cytochrome C peroxidase [Orthogroup: CcP004]

Taxonomy

Eukaryota Bigelowiella

Organism

Bigelowiella natans [TaxId: 227086 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	BnaCcP04 start..stop	S start..stop
BplCcP02	349	1.35e-122	13..262	19..269
ChrospCcP05	337	7.09e-118	7..257	7..254
CspCcP07	335	6.59e-117	10..259	19..265
CcurCcP03	327	6.94e-114	6..259	9..259

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11108' 'join(642423..642467,642553..642664,642886..642912,643275..643328,643497..643531,643658..643695,643877..643918,644098..644116,644249..644295,644580..644656,645093..645126,645276..645351,645737..645823,645963..646009,646089..646146) '

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	642423..642467	43	N° 2	642553..642664	110	N° 3	642886..642912	25	N° 4	643275..643328	52
N° 5	643497..643531	33	N° 6	643658..643695	36	N° 7	643877..643918	40	N° 8	644098..644116	17
N° 9	644249..644295	45	N° 10	644580..644656	75	N° 11	645093..645126	32	N° 12	645276..645351	74
N° 13	645737..645823	85	N° 14	645963..646009	45	N° 15	646089..646146	56
join(642423..642467,642553..642664,642886..642912,643275..643328,643497..643531, 643658..643695,643877..643918,644098..644116,644249..644295,644580..644656,64509 3..645126,645276..645351,645737..645823,645963..646009,646089..646146)

Literature and cross-references BnaCcP04

DNA ref.	JGI genome: scaffold_43 (642423..646146)
Cluster/Prediction ref.	JGI gene: 92621

Protein sequence: BnaCcP04

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	265 (320)
PWM (Da):	29033.64 (35049.0)
PI (pH):	7.93 (9.90)	Peptide Signal:	cut: 24 range:24-343

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDTDHKRLYGEIARVGPTLVRLAWHSSGTYDKMSRTGGSGLGTIRFKDELAHGANAGLNTAVEWLEPIHAKYNGGISYADLYTLAGITAIETLGGPQIGWRAGRVDAMDPSAVTPDGRLP
AADKGSPQDTAEHLRSIFGRMGFNDQEIVALAGAHALGRGHVNYSGYDGPWTFTPTRFNNAYFDLLLRLEWVPQTTNAGNKQFTDAKTKTLMMLPSDLVLIQDSSFRKFTEMYAGDNAKF
LKDFSKAFQKLEELGTSNLRSVKLS*

Retrieve as FASTA

Remarks

Complete sequence from genomic (14 introns)

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGATACAGACCATAAACGATTATACGGCGAGATTGCGAGAGTATAGTAAGCAGCCGTGCAAATTGTGTTTTGGAAGTAAAACCTAGTTCCAAGCGCACTTTTGGTTGCTGCATCTGTG
TGTGTTGTTTAGGGTCCAACGCTTGTTCGACTTGCATGGCATAGTAGCGGCACATATGATAAGATGAGTAGGACGGGTGGAAGCGGATTGGGAACGATTCGATTTAAGGATGAGCTTGCA
CATGTGGTTGGTTCGTTGATAAGGAGGCTTTATAGTAGTAGCCCTTTGGTATGATGATGATGATGATGATGATGATGATCATGATGATACACCATGGGTGAGAAACTGTATTCGAGTCAG
CAAAGTCATCCCACGCCGATATACTCGAGCAGCAGCCATCGTCATGTGCTTAACGAAAATAGCCTGAATTTTCCTTTATCATTCACTCCTTTTTCTGAAACAACTAGGTGCAAATGCAGG
CCTAAACACAGCAGAGGTGAGTTCCGTCCGTGCACTACGCACGGCGTGTTCGTTGTATGGCTTCTTCGTGGCCTACCTACCTGCCAGAAATTGAAAATCGCAATGTGTCCTTAATCATGA
TGATGATGATGAATGCCACATTACGAAGTAGCTGCTAATGCTACTGCTGCTGCTGTCTAGATAGATAGACGTGCTACTACTGCTACTACTACTACTACTATTTCCACTACAACTACTACA
CAGTTGACGCCTCCTCCTTATTGCTGACCTATCGATCATTGTATGTGTACTGGTTATCTTACACAAGTCACAGTATAATCAACATTATGATATCGTCATCATCGTCATCGTTCTGATCAT
CATCATTGTCGTGGTCAGTCGAATGGTTGGAGCCTATTCATGCCAAGTACAATGGTGGGATTAGCTATGCAGAGGTGGTTATCATCATCATCATCATTATCATCATTATCATCATCAAAG
TTAGCATAAATAGCTTGTACCAATGAATATAAGTTTCACTTCGTTGTGCCTTATCATCACCCTCCCTACTACCACCACCACGACTACTACTACGACTACTGCTACCATCATCTTGATTGC
AGATCTATACACTCTTGCTGGTATCACTGCAATCGAGAGGTAGTGCTTCTTGGTGCCATCGTCTTGTCCTCCTCGTTGTCGTTGTAACCGACTGATGATAAATAAAATACCAGTGGTCGT
ACTAATACTACATGTCATTGTTGCTGTTTATCGCGTACAATGTAGACGCTAGGAGGACCACAAATTGGGTGGAGAGCTGGAAGAGGTAGTAATACATGGATGATGATGAAGAAGAAAGAA
AGAAAGAAAGAAAGAAAGAAAGCAAGATCATCATATGCTTTGAATACTTGCATCGATTTCATATTGGGGAGGGACGGTGGTGGTGTATCGTGTCTGTTTGCATGTGTTTGATGGAGATGT
TGGCGGCAATAATGTATGTTGTATAGAGTCGATGCAATGGACCCTTCAGCTGTCACTCCGGATGGACGCGGTGAAGATCGATAAATACGACTGATAATGATGGTGGTGATGATGATATCG
AAACGATGGATTTATGATGATAACGAGAAAAAGCTATGCTGGGATTCTTGTGCTAATTCTGACATATCTGTTTATCGATCATATCGTCGTCTTACTCGGTGCTGCTGCTGGAAACACATA
AATGTAAAGCCTTCCAGCTGCGGACAAGAGGTAAGATAGAAGAAGGCGAATATCACATTTTCTTCTCATTTTCCACACACACACACACATATGAATAGTCAATACGACGCCAAGGGTAGT
TAATTAAATGACGTGAGGCTGGCTTCTACCTAATACTCACAGGGAAGTCCTCAAGACACTGCAGAGCACTTAAGATCGATTTTCGGAAGAGGTATTTATCTATTGCTGCCTCCTATGTTA
TGATAATGTCGTATTCGTGGTGGTGGTTTTTCCTTATTGTCATTCGTTAATGATTACTTCATTCCATCCTCTGCCTTATAAGCGCTTTTGTCTTTATTTTCACATATCATATCGTTATGA
CGGCATCGACGCATACGTTACTACGATAAAATAAGTTCTATAAGTACCATCATCATCATCATCATCATCATCATCACTATCACCATCCTACTAGCATCGTCATCTCTTCATCATCCATTT
TTACACAATACTCAGAATGGGATTTAACGATCAAGAAATTGTGGCCTTAGCTGGCGCTCATGCACTGGGACGGGGTCACGTAAACTACTCAGAGGTTAATGCATATATATATATATATAT
ATATATATATATAATATAACAAAGGGTGATGATACCACCCTCTATATTATAGCAAATATTAGAAGTAGCACCATCAAAATCGTTCCTAGCGGTGCATGCACTCACATGGAGCGATACTAC
ATTGAAAGTCGTCAATATTTTTCTTGCATCTATCGTGGTTATATGCTTATATTGTGTCGGAACGATACTACTACAAATTCCTAATATACTCATGTCGATGATACAATTTATGATGATGAT
GATGATGATGATGATGATGATGATGATGATAACGATGACGACGACGTATTTAAACACGTACTATCACGACGTGAGTTCCTTTCTCTTCTTCTTTCCTTCTTACTGATATGATGATGATAC
TGCTGCTGTGACTGTTGTTCGCCCCCCCCCCCCCTTTTCACCACGCGTAGGTTATGATGGGCCTTGGACATTCACTCCTACCAGAGGTTAGATGGGGTGAGGGGGTGATGCATGGAAGGA
TGATGGTATCAGAATGATGCATCATGATAATATGATTAAAAATCGTCATTAGCCATAACACAGCGGGTAGTGTTATGTCCACAATTTATCGTCATCGTAACGACGTTTTTGGTAGGTTCA
ACAATGCATACTTTGATCTGCTACTACGGCTTGAATGGGTGCCTCAAACAACGAATGCAGGGAACAAGCAGAGGTAGTAGAGTAGGCAAATCAACAATGGCCATACAATAACATGAATGG
GGTCCTCGCAATAAATATGCTAGCTGCGAGCTCAAACTATAGCTGAAGAAGTAGAAATATGATGATAATATTCATTATGAGGAAGAAGCATGTGGAGACTGTTGGTAGCACTCGAAACAC
CATCACCGCCAATATCTTTTTCTTCCTCCTCCTCATCGTCGGCGTCGTCATTATCATGATTGCCATCAAGTGCTGTACATCTTAACGATGCTGTACCTAGCTAGTCTATTTGTGAAGGTA
GTTACCATGTATCTTTTAAACCTCCAATGCTTTTACAACTCGTCGTCGTCGTGTTCTTCTCCCTCTTCCTCTGCCTCTTCTCTTTCCATTCTGTGCAGTTTACTGATGCGAAAACCAAGA
CACTAATGATGCTACCATCGGACTTGGTTTTGATTCAAGATTCTAGCTTTAGGAAATTCACTGAGAGGTGTGTGTGCATTCATGTGCAAAGACAGCGGAAACCGATTTGCAACGTATAGA
CCAATTTCATTATTATTACAGCAAGCGCATTTAATTTCCCATAAGTTTCAGGAACTCAAATATAGTTGTGAAATGATGTTCTTCAGATGTACGCAGGAGACAATGCGAAGTTTCTGAAAG
ATTTCTCCAAAGCGCGTAGGCCACCTTTTGAGAATTTGTAGATCGTCCACGCAACCCTAATGCTTCAATATTGTTACATCTTATCAACATTTAGGTTTCAGAAACTTGAGGAGCTTGGAA
CATCTAATTTAAGATCTGTGAAGCTCTCCTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGATACAGACCATAAACGATTATACGGCGAGATTGCGAGAGTAGGTCCAACGCTTGTTCGACTTGCATGGCATAGTAGCGGCACATATGATAAGATGAGTAGGACGGGTGGAAGCGGA
TTGGGAACGATTCGATTTAAGGATGAGCTTGCACATGGTGCAAATGCAGGCCTAAACACAGCAGTCGAATGGTTGGAGCCTATTCATGCCAAGTACAATGGTGGGATTAGCTATGCAGAT
CTATACACTCTTGCTGGTATCACTGCAATCGAGACGCTAGGAGGACCACAAATTGGGTGGAGAGCTGGAAGAGTCGATGCAATGGACCCTTCAGCTGTCACTCCGGATGGACGCCTTCCA
GCTGCGGACAAGGGAAGTCCTCAAGACACTGCAGAGCACTTAAGATCGATTTTCGGAAGAATGGGATTTAACGATCAAGAAATTGTGGCCTTAGCTGGCGCTCATGCACTGGGACGGGGT
CACGTAAACTACTCAGGTTATGATGGGCCTTGGACATTCACTCCTACCAGGTTCAACAATGCATACTTTGATCTGCTACTACGGCTTGAATGGGTGCCTCAAACAACGAATGCAGGGAAC
AAGCAGTTTACTGATGCGAAAACCAAGACACTAATGATGCTACCATCGGACTTGGTTTTGATTCAAGATTCTAGCTTTAGGAAATTCACTGAGATGTACGCAGGAGACAATGCGAAGTTT
CTGAAAGATTTCTCCAAAGCGTTTCAGAAACTTGAGGAGCTTGGAACATCTAATTTAAGATCTGTGAAGCTCTCCTAG

Retrieve as FASTA