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Entry information : BnaCcP05
Entry ID 11109
Creation 2012-06-04 (Christophe Dunand)
Last sequence changes 2012-06-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-06-04 (Christophe Dunand)
Peroxidase information: BnaCcP05
Name BnaCcP05
Class Cytochrome C peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Bigelowiella
Organism Bigelowiella natans    [TaxId: 227086 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnaCcP05
start..stop		 S start..stop
BnaCcP03 199 1.06e-61 65..274 32..257
AmaCcP 195 3.11e-59 65..274 98..326
AmaCcP02 194 4.37e-59 65..274 98..326
CowCcP01 187 2.71e-56 65..271 87..313
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11109' 'join(1048637..1048735,1048801..1048917,1048979..1049057,1049141..1049170,1049291..1049434,1049531..1049590,1049664..1049720,1049820..1049848,1050049..1050160,1050330..1050369,1050731..1051103) ' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1048637..1048735 97 N° 2 1048801..1048917 115 N° 3 1048979..1049057 77 N° 4 1049141..1049170 28
N° 5 1049291..1049434 142 N° 6 1049531..1049590 58 N° 7 1049664..1049720 55 N° 8 1049820..1049848 27
N° 9 1050049..1050160 110 N° 10 1050330..1050369 38 N° 11 1050731..1051103 371  
join(1048637..1048735,1048801..1048917,1048979..1049057,1049141..1049170,1049291 ..1049434,1049531..1049590,1049664..1049720,1049820..1049848,1050049..1050160,10 50330..1050369,1050731..1051103)


exon

Literature and cross-references BnaCcP05
DNA ref. JGI gene:   scaffold_12 (1048637..1051103)
Cluster/Prediction ref. JGI gene:   70618
Protein sequence: BnaCcP05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   379
PWM (Da):   %s   41603.28 Transmb domain:   %s   i40-62o
PI (pH):   %s   9.87
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSFAKIAKSFARNYIKPLRSKLFQTRTVAQKPKQMVHNDLATGVAATVTSLAAVAGGMYYFTQPNYSAIRAEIEELLDDLDYDDGSYGPVFVRLAWHNAGTYNMFDKTGGSEGAGMRFAT
EAKDPANAGLDIARARLEPIKQKYPEISYSDLWSLAGTVAIESLGGPKMKWVGGRKDNVSEELGPPAGRLPDAARGAIPTAVASRVLGCSPRPHSPTSTTESSLRTDGSRRSGMGRTSLK
TNLRFNEQLIFCLGTRGKLMMLPTDMAIIEDPIFNAVRGDVLQRRGIVLQRLCQGGSVETGYILCLVSKKYRSKFNFPSGMVQAATRGFHALDLLAFRNHAAYAQCNDDCELKSLVLIKR
GAQFRYPHQEPLYARSRDL*

Retrieve as FASTA  
Remarks Partial sequence from genomic (fragment is missing due to "n" in the sequence)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTTTGCCAAGATTGCCAAGTCATTCGCCAGAAACTACATCAAGCCTCTGAGGAGCAAGTTGTTTCAAACGAGAACCGTGGCTCAGAAGCCGAAGAGGTCGTTCTCCTTCGTTTCT
TGGTTTCAATTGCTCCGCTGACCTGGTTGTGCGCCCCTTCTAAAAGCAGATGGTCCACAACGATCTGGCTACCGGTGTAGCTGCAACGGTTACATCGCTCGCAGCTGTAGCGGGGGGCAT
GTATTACTTTACCCAGCCAAACTACAGCGCGATTCGGGCTGAGAGGTTTGAAACCCAATATGCTTTCCTGCCCGTCACTTGAATGATCATTGCATGTGAAACGCAGATCGAGGAGCTCCT
TGACGACTTGGACTACGACGATGGAAGCTATGGCCCTGTCTTCGTCCGCCTTGCATGGCACAATGTGGTACACTTGCTGATGCTTTCCACCGTTCAGCAGCACACCACACCGCCGCGTAT
TGAGGCATCATCGTGTTTCTTGATCATCAGCCGGGACCTATAACATGTTCGACAAGACAGAGGTATCTTGAATCACAGTTGGGGTCATTTTCGGCTGCCTTACTATTTCTTCCTCCTTCC
CACCTTCCCTCCCTTTGTTGGCCCCCCCCCTTACCCTTTCTCCTGTTCCCTCCATGTATCAGGGGGAAGCGAGGGCGCAGGCATGCGATTCGCAACGGAGGCCAAGGACCCAGCCAATGC
AGGACTTGATATCGCACGGGCTCGTCTTGAACCAATAAAGCAGAAGTACCCTGAAATCTCGTACTCCGACCTCTGGTCCTTAGCAGAGGTGGGAGCGTGCCAAAAGAGCTCAATCAATCG
GCGAAAGCCGAAGCAAGCTGAACTATTACTCACGCGATGTCCTTCCCTCTTTGTCGCATTGCAGGGACCGTCGCGATCGAGTCCCTTGGGGGACCAAAGATGAAGTGGGTTGGCGGCAGA
AAAGAGGTGTGGAGCGAACAACTTCCACCGATCATTGCTGAAAGGCGCACCTAATGTTGATCTTTCTCTCTCATACTAGACAACGTTTCCGAAGAGCTCGGCCCTCCAGCGGGCAGACTG
CCTGATGCTGCACGCGCGGTCTGCTAGTTTGTGCATTATCCCGTGCTTTTCTGGACTAAGAATATGGAATTCCCCCCCCCCCCCCCCCTCCCTCATGGCCATGTTAATGTCCAACAGGTG
CCATACCGACCGCAGTGGCTTCAAGGGGGTAGGCACTAATAGGATATCAATAACAGCATAAGAAGAATAGAATCGTATTGAATACGACGACTCGAGATCATGGAGATGGGATGGGGAGGG
GTGTTCCTGATTTAAGGCAAATCGCGCAATCTCTCACTGCGTAGCTGCTGACGTCCGTTCGGTTCTCTATTCCCCCTCCCCCCCCCTCCCCCCCTTCGCTTCCTGTAGGTCCTTGGGTGT
TCTCCCCGACCACATTCTCCAACGAGTACTACCGAGAGCTCTTTGAGAACCGATGGAAGCCGAAGAAGTGGAATGGGCCGCACCAGTTTGAAGACAAATCTCGTGAGTGGAAGTTCCGTT
CGCTAACGTTGATTTTGGCATCAACCCTGTTCTTATGAAAGGATGGTTTTTCCTTCTCCCTCTCTCTCCCTCTGCCTCTCCCTCTCCCCCCCCAAAAACAGTGTACCCCCCCCCCCCCCC
CCAAGACGTTGTTTTTTTCTAAAAAAAAAAGTCCGCTTTAATGAGCAATTAATATTTTGTCTAGGAACACGCGGTAATAATAAGCGTTTATAGGGTGAGAACTTTCTTTGTGACTCTTGT
GTTTCTTCCTCGGCGGCTCGTATTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCCCCCCCCCTCCCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCGCGCAGGGGCAAGCTGATGATGCTTCCCACGGACATGGCAATTATCGAGGAC
CCGATCTTCAACGCCGTACGCGGAGATGTACTACAAAGACGAGGAATTGTTCTTCAACGACTTTGCCAAGGTGGTAGTGTGGAAACCGGCTACATCCTTTGTCTTGTGTCGAAAAAATAT
AGGAGTAAATTCAATTTTCCATCAGGTATGGTACAAGCTGCAACACGTGGGTTTCACGCTTTAGATTTATTAGCCTTCCGTAATCACGCCGCATATGCCCAGTGCAATGATGACTGCGAA
TTGAAGAGCTTGGTTTTGATTAAAAGAGGCGCACAATTTCGGTATCCGCACCAAGAACCTCTCTATGCGCGTTCGCGAGATCTGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTTTGCCAAGATTGCCAAGTCATTCGCCAGAAACTACATCAAGCCTCTGAGGAGCAAGTTGTTTCAAACGAGAACCGTGGCTCAGAAGCCGAAGCAGATGGTCCACAACGATCTG
GCTACCGGTGTAGCTGCAACGGTTACATCGCTCGCAGCTGTAGCGGGGGGCATGTATTACTTTACCCAGCCAAACTACAGCGCGATTCGGGCTGAGATCGAGGAGCTCCTTGACGACTTG
GACTACGACGATGGAAGCTATGGCCCTGTCTTCGTCCGCCTTGCATGGCACAATGCCGGGACCTATAACATGTTCGACAAGACAGGGGGAAGCGAGGGCGCAGGCATGCGATTCGCAACG
GAGGCCAAGGACCCAGCCAATGCAGGACTTGATATCGCACGGGCTCGTCTTGAACCAATAAAGCAGAAGTACCCTGAAATCTCGTACTCCGACCTCTGGTCCTTAGCAGGGACCGTCGCG
ATCGAGTCCCTTGGGGGACCAAAGATGAAGTGGGTTGGCGGCAGAAAAGACAACGTTTCCGAAGAGCTCGGCCCTCCAGCGGGCAGACTGCCTGATGCTGCACGCGGTGCCATACCGACC
GCAGTGGCTTCAAGGGTCCTTGGGTGTTCTCCCCGACCACATTCTCCAACGAGTACTACCGAGAGCTCTTTGAGAACCGATGGAAGCCGAAGAAGTGGAATGGGCCGCACCAGTTTGAAG
ACAAATCTCCGCTTTAATGAGCAATTAATATTTTGTCTAGGAACACGGGGCAAGCTGATGATGCTTCCCACGGACATGGCAATTATCGAGGACCCGATCTTCAACGCCGTACGCGGAGAT
GTACTACAAAGACGAGGAATTGTTCTTCAACGACTTTGCCAAGGTGGTAGTGTGGAAACCGGCTACATCCTTTGTCTTGTGTCGAAAAAATATAGGAGTAAATTCAATTTTCCATCAGGT
ATGGTACAAGCTGCAACACGTGGGTTTCACGCTTTAGATTTATTAGCCTTCCGTAATCACGCCGCATATGCCCAGTGCAATGATGACTGCGAATTGAAGAGCTTGGTTTTGATTAAAAGA
GGCGCACAATTTCGGTATCCGCACCAAGAACCTCTCTATGCGCGTTCGCGAGATCTGTAA

Retrieve as FASTA