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Entry information : CroPrx08(CRO_T007283 / cra_locus_1280_iso_2_len_1294_ver_3)
Entry ID 11193
Creation 2012-07-11 (Christophe Dunand)
Last sequence changes 2012-08-17 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-04-15 (Christophe Dunand)
Peroxidase information: CroPrx08(CRO_T007283 / cra_locus_1280_iso_2_len_1294_ver_3)
Name CroPrx08(CRO_T007283 / cra_locus_1280_iso_2_len_1294_ver_3)
Class Class III peroxidase    [Orthogroup: Prx039]
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx08
start..stop		 S start..stop
NtPrx05-1A 532 0 1..337 1..329
MguPrx15 528 0 36..337 41..342
BrPrx09-1Aa_other 523 0 9..337 8..347
TsPrx09 520 0 34..337 49..352
Literature and cross-references CroPrx08(CRO_T007283 / cra_locus_1280_iso_2_len_1294_ver_3)
EST ref. GenBank:   FD421360.1 [3' end]
Protein sequence: CroPrx08(CRO_T007283 / cra_locus_1280_iso_2_len_1294_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   337 (314)
PWM (Da):   %s   36726.59 (34324.3) Transmb domain:   %s   i2-24o
PI (pH):   %s   6.62 (6.62) Peptide Signal:   %s   cut: 24 range:24-337
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASLGFAFPI AVIASLFLIQ LQAFPASGFW PGYSGLFPEF YDFTCPQANE IVMSVLEKAI AEDPRMAASL LRLHFHDCFV QGCDASVLLD DSATVKSEKN AGPNKNSLRG FQVIDEIKAK  LEQVCPHTVS CADILALAAR DSIVLSGGPH WEVPLGRRDS KTASLKKANS NIPAPNSTIQ SLVTAFNRQG LNEEDLVALS GGHTIGAARC VSFRQRLYNQ DGNNRPDETI EKNYYNDLKS 
VCPKTGGDNN ISPLDIASPV RFDNTYFKLI LLGKGLLTSD QVLMTGKEAK TMELVKSYAE DEALFFHQFA KSMVNMGNIS PLIGSQGEIR KNCHRIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic and EST ( cra_locus_1280_iso_2_len_1294_ver_3, cra_locus_1280_iso_1_len_1221_ver_3). Incorrect prediction (ORF fusion and splicing error intron 3)
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCTC TTGGATTCGC ATTTCCCATT GCTGTAATTG CTTCTCTCTT TCTGATTCAG CTGCAGGCTT TTCCGGCTTC TGGGTTTTGG CCAGGTTACT CTGGTCTTTT CCCTGAATTC  TATGACTTCA CATGTCCACA AGCCAATGAA ATTGTCATGT CTGTTCTGGA GAAGGCCATA GCAGAAGATC CTCGGATGGC TGCCTCTTTA CTCAGGCTCC ATTTCCATGA CTGTTTTGTT  CAGGTATATC CATTGAATCC CATTATGTCT TGTTTTCTCT GTGTACATTA CTACAATTGG TTTTCTTTCC TGCTTTCAGG GCTGTGATGC ATCGGTCCTG TTAGACGATA GTGCCACAGT  AAAAAGTGAG AAGAATGCTG GACCAAACAA GAATTCCCTC AGAGGATTCC AAGTGATAGA TGAAATCAAA GCTAAACTTG AACAAGTATG TCCTCACACT GTCTCCTGTG CTGACATTCT  GGCCCTCGCT GCCCGAGATT CCATTGTACT AGTAAGCTTC TTGAAACCTT TAACGCTCTC AAATGCAATC TTCAGCTTCT TTTAGATTTG CAACAAAGCA TAAAAGCAGT AAGAAGCAAA  ATTGTTAGAA CTTAGAACTA TGATCAAGAT GGCTCGCTTT ACTTAAAGAC TTATTTCGTT CCATCAATAT TCTTCTTATG CAACAGCGCG TTTTACCAAG TACCATTAGT GTCAATTGAA  GTTCTAACAA TTGTTACGAG GATTTCCTTT CCCCTCACAA TGTCTGTCTT CGTCTATTTT GGACTAATTG GTGTTAATGA TGGAACAGAG CGGTGGTCCA CACTGGGAAG TCCCATTAGG  GAGGAGGGAT TCAAAAACTG CAAGCCTAAA GAAAGCAAAC AGCAATATTC CTGCACCAAA TTCCACCATC CAAAGCCTCG TTACTGCCTT CAACCGGCAA GGCCTCAATG AGGAAGATCT  CGTTGCTCTT TCTGGCGAGT TTTTTTTACA TCCTTTAGAC CATTCTTGGC AATAAATTTT TGTTTTTCAT GAAGAAGAAT GTATGATTCT TTTGCTGTAA ATGCTGCAGG AGGTCACACC  ATTGGAGCAG CAAGATGTGT CTCGTTCAGA CAAAGGCTAT ACAACCAAGA TGGAAACAAC AGACCAGATG AAACAATAGA AAAGAACTAC TACAATGATC TGAAATCTGT TTGTCCTAAA  ACTGGAGGAG ACAATAACAT TTCTCCTTTG GACATTGCAT CTCCTGTCCG ATTCGACAAC ACATATTTCA AGCTGATTCT ACTAGGCAAA GGACTTCTAA CCTCTGATCA AGTCTTGATG  ACAGGAAAAG AAGCCAAAAC AATGGAACTA GTCAAGTCCT ATGCAGAAGA TGAAGCACTT TTCTTCCATC AGTTTGCGAA ATCCATGGTT AATATGGGCA ACATTAGTCC TCTTATCGGT 
TCCCAAGGTG AAATTAGGAA GAACTGCCAT AGAATCAACT GA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCTC TTGGATTCGC ATTTCCCATT GCTGTAATTG CTTCTCTCTT TCTGATTCAG CTGCAGGCTT TTCCGGCTTC TGGGTTTTGG CCAGGTTACT CTGGTCTTTT CCCTGAATTC  TATGACTTCA CATGTCCACA AGCCAATGAA ATTGTCATGT CTGTTCTGGA GAAGGCCATA GCAGAAGATC CTCGGATGGC TGCCTCTTTA CTCAGGCTCC ATTTCCATGA CTGTTTTGTT  CAGGGCTGTG ATGCATCGGT CCTGTTAGAC GATAGTGCCA CAGTAAAAAG TGAGAAGAAT GCTGGACCAA ACAAGAATTC CCTCAGAGGA TTCCAAGTGA TAGATGAAAT CAAAGCTAAA  CTTGAACAAG TATGTCCTCA CACTGTCTCC TGTGCTGACA TTCTGGCCCT CGCTGCCCGA GATTCCATTG TACTAAGCGG TGGTCCACAC TGGGAAGTCC CATTAGGGAG GAGGGATTCA  AAAACTGCAA GCCTAAAGAA AGCAAACAGC AATATTCCTG CACCAAATTC CACCATCCAA AGCCTCGTTA CTGCCTTCAA CCGGCAAGGC CTCAATGAGG AAGATCTCGT TGCTCTTTCT  GGAGGTCACA CCATTGGAGC AGCAAGATGT GTCTCGTTCA GACAAAGGCT ATACAACCAA GATGGAAACA ACAGACCAGA TGAAACAATA GAAAAGAACT ACTACAATGA TCTGAAATCT  GTTTGTCCTA AAACTGGAGG AGACAATAAC ATTTCTCCTT TGGACATTGC ATCTCCTGTC CGATTCGACA ACACATATTT CAAGCTGATT CTACTAGGCA AAGGACTTCT AACCTCTGAT  CAAGTCTTGA TGACAGGAAA AGAAGCCAAA ACAATGGAAC TAGTCAAGTC CTATGCAGAA GATGAAGCAC TTTTCTTCCA TCAGTTTGCG AAATCCATGG TTAATATGGG CAACATTAGT 
CCTCTTATCG GTTCCCAAGG TGAAATTAGG AAGAACTGCC ATAGAATCAA CTGA 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGGCCGGGGA TTTGGTAACA GAGTGGTTGA TTTGATATAG AGAAAGGCTA TCTCTTGTGC TATAAATAAC TTATACTTGT AAAGCCAATG GCACCAAAGC CATTACTTAA GAAAACCAAC  TTTCTTAGCC TTTCAGCTTC TAATGGCTTC TCTTGGATTC GCATTTCCCA TTGCTGTAAT TGCTTCTCTC TTTCTGATTC AGCTGCAGGC TTTTCCGGCT TCTGGGTTTT GGCCAGGTTA  CTCTGGTCTT TTCCCTGAAT TCTATGACTT CACATGTCCA CAAGCCAATG AAATTGTCAT GTCTGTTCTG GAGAAGGCCA TAGCAGAAGA TCCTCGGATG GCTGCCTCTT TACTCAGGCT  CCATTTCCAT GACTGTTTTG TTCAGGGCTG TGATGCATCG GTCCTGTTAG ACGATAGTGC CACAGTAAAA AGTGAGAAGA ATGCTGGACC AAACAAGAAT TCCCTCAGAG GATTCCAAGT  GATAGATGAA ATCAAAGCTA AACTTGAACA AGTATGTCCT CACACTGTCT CCTGTGCTGA CATTCTGGCC CTCGCTGCCC GAGATTCCAT TGTACTAAGC GGTGGTCCAC ACTGGGAAGT  CCCATTAGGG AGGAGGGATT CAAAAACTGC AAGCCTAAAG AAAGCAAACA GCAATATTCC TGCACCAAAT TCCACCATCC AAAGCCTCGT TACTGCCTTC AACCGGCAAG GCCTCAATGA  GGAAGATCTC GTTGCTCTTT CTGGAGGTCA CACCATTGGA GCAGCAAGAT GTGTCTCGTT CAGACAAAGG CTATACAACC AAGATGGAAA CAACAGACCA GATGAAACAA TAGAAAAGAA  CTACTACAAT GATCTGAAAT CTGTTTGTCC TAAAACTGGA GGAGACAATA ACATTTCTCC TTTGGACATT GCATCTCCTG TCCGATTCGA CAACACATAT TTCAAGCTGA TTCTACTAGG  CAAAGGACTT CTAACCTCTG ATCAAGTCTT GATGACAGGA AAAGAAGCCA AAACAATGGA ACTAGTCAAG TCCTATGCAG AAGATGAAGC ACTTTTCTTC CATCAGTTTG CGAAATCCAT  GGTTAATATG GGCAACATTA GTCCTCTTAT CGGTTCCCAA GGTGAAATTA GGAAGAACTG CCATAGAATC AACTGAAATT GAACTTGTTT TTCTCTAAAA CTTTATGGGG TGTATGCTGT 
TCTTGATTTC ATTATGAAGT TTTTGTAATG TGTGATTGAA ATGTGAATGA ATCAATATAA GAAGCTTTAG TAATGAGTTA TCTTCATCAC CACC 

Retrieve as FASTA