Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
342 (307) |
| PWM (Da): |
37672.73 (32391.4) |
|
| PI (pH): |
4.72 (7.99) |
Peptide Signal: |
cut: 19 range:19-325 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAMKILGLLL FLAIAAISGL GAEGSDDNIS DSSLFRYDFY EKTCPDVEKI IYYAMQKIIS QNKNAPAQLL RLLFHDCFIE GCDASILLND MNGTETVERK AGPNLTLKGF QFIDMIKEEV
EKECPGVVSC SDILVLAARY GVLLSGGPYY PLFTGRRDGN ESFFHKAEIE MPGPDEDITD TLRLFSLRGF SERETVALLG AHNIGQVSCE FIKPRLGNFR NTGFPDSTIT TNFLAEMSFK
CQESSASVSN SYPSQATSFS PPESPFGTHY YQNLVQGRGL LHADQQLTAD DETAKVVEEY AYDGKAFRND FARMLIKLSN LGVRTGLQGQ VRLNCSIALN SV
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic and ESTs (2 contigs without overlap: 5': cra_locus_45564_iso_1_len_486_ver_3 and 3': cra_locus_15695_iso_1_len_694_ver_3. Incorrect prediction of intron 1 |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTTAACA ACAATTTAAA AAACGTATTT CATGTACGAA AGTATTCGAA TCGATAACAA TTTTACAAAG TGTTGCAATG TATCATCTTT CTCTTACTCA CTAATTTTCA CTTGTGATGA
AATTCATAAA TTGAGAGTTT ATTGAGTCAT TGTGATAACT AATATTTATA TCATAATTGT TGTCACGGTC AAAATCTATG TTATAAATAA ATTATAAGTT TAATGCATTC ACTTTAGGCA
ATGACATAAA ATCAATTTGT TGGCCAGTAT CATTTTCATC AATGTCTTAA TTCCCATTTA GTCTCAAGAA GATGTGAGAC TAATTTAATA AAATGTTCAA AAATATCTTT TTCCATATTA
CTACTGTAGC AGCATATTTG AGATATGATA AAAGATAGAA TATTTCCTCT ATCATCACTA ATAATATTTT CTCTGTAAAT TTTAATTGAG GAGAAATCCT AAATATAATA GAAATATGCT
ATTGATAAAT GTAAAACTTT TAGGAAACAA AATTACGAAA TATGCCTTAA GAGTAGAGAC TTGTAAAGTA ATCTTAATAA AATGATGGGC TATTCCGATG AATATATAAA AAAATAATGT
CAGAAGAATT TATACAAACA AAAAAAAAAA GTGAGAAGTT GAGCTCCAAG TTTCGAAAGG TTATCAGCTT AAATATAGAG ACATGTTTTA GCCTCCGCTG TTATGCGTAT ACATCATTGT
ACGAGTTGCT TCCTGAGTTG TACCTACAGG GGGGTACGAA CAAGTCTGTT TGGTTCCCGG GGGTGCTATG CTGTTACTCT TCTGGGACTT CTCCTTACGC TTCCTCGTCT TCTTCAGTAT
ATCTACTCGG ATTTTTTCTA ATACATTTTT CGTCTAAAGC TCTTCCGGGA ATCCCTTCAG AAACGTACCG GGAAGTTGCA GAAATGGCAA TGAAAATTCT GGGTCTGTTG TTGTTCTTGG
CTATCGCTGC CATTTCAGGT CTTGGGGCTG AAGGATCAGA CGATAACATC AGCGATTCTT CGCTTTTCCG ATACGATTTC TATGAAAAGA CTTGCCCTGA CGTTGAGAAA ATCATTTATT
ACGCCATGCA AAAGATTATC TCCCAGAACA AGAACGCCCC TGCTCAGCTG CTTCGCCTCC TTTTCCATGA TTGCTTCATT GAGGTAATTC CCTAATCACA GTTAGTTTCT TACTTGATCT
GTATTTTTTT TAGTTTTAAC GGTAATGGAT TCCTCTTATT TCTACCGTCT ACCAAGTTAT TTTCATAATG TCGACTTTGT CTCTGTGATT CCTAGTTAAA TTGCATTTCT TGGAGGACGC
GAGGGTTATT GCATTTCTTT TTCTTTTATT TGTAGTGTTT ACTTATTCTT TCTTATAAAT GCGAATCTGA TCTTGAATTA TTTCTGTTAG GTATGGATTT CTGGATTTGA CTTTGGTTTC
TTAGTGTGAT TATACTGTCT CTGTTCTTTT AATATTCTGG GTTTCTCACA TTAACTGTAA TCTTTACCAT TTTGCTTTGT AGTACCAGTT TGTTTTCAGG TGTAATTTGT GGATTTCTTA
TGCTTGATTG TTGATTCTTG ATTCTTGCTA TTGAGAGTTT TAATTTAAGT TTTCTTAAAC TGCATATGTT TTCTTAAACT GCATAGGCGA TGGTGGAAGG CATATTGCAG GTTTTTTATG
TTTAATCATT TTTGGATTTT GTGATTTACA GAATTGGAAT GTATCATTAA TTTTGTATAT ATATGAACAT TCGACTTGGA GTTGGCTTAT AGAGTGATCC AGTGTTTAAT CATCTGGGTT
CTGTTGCTCT TTAGAGTTTT TATCCCCAGT ATAGTGCTGG TTTTCACTTT AAAGTTATTA GTGTTCGGTA TGATGTGGGG AGTATAAGTC ACGTTTGATT CTCTTCCAGT GACCTCAAAT
AGACAAACAC GCACACAAGA CAGTTCTAAC TGTTTATCAG ATCATTTGTC CATTTGTGAA TAGCTAAATG ATTTGATAGT TTTTGGGATT TGGACTAAAA TCATTGTCTG TGGCTGAAAG
AAAAGAAAAC AGAAAATGCA GTGATTGAGT TTGATGTTTT AGGTCTTATG ATGTAGAGTC TTTTCCAGGT TTTCATTAGG TTAATGTTAG GGTTAAAGGA AAAGACAATC TGAATCCTGT
CCGGCCCCGC AATGTTTATC ATCTGAAATG AGTGAGCGAG GAGAATATGG AAGCAAGGAG TAGATATTGT TTCATTTCAT ATCCGCAACA TTTATCATTG AAAATAAGCT GATCTTCTAA
GCAGCTTGAT TTATTGCTTT ACTTGGATTA GGAGACCATT GAGAATAATC GTCGGTATTG TCCCCTTGCA ATTAGTCAGA TAGTAAGCAT GCTTGCTTAA TGCTTCAAAG AAATGCTTAC
TTCCATAAGT TTTAGATCTT CTTTGTGCAA TATTTCGACT AAAATTGGCT CAATTAATCA ATGAAGCGAG GGTTCAGTGG TTCTAGGGAT TGACTAAATC AATTTTGTAA TAAGAAATTG
AAGCAAGAAA ATGAAACTTG AACATGTAAT AGGAATAAAT TTACTGAATT ACTCTTGTTT CATGGCATAA AAGTAACTCT TTGATGTTTT TACAATCTTG AAACTGATTC TTGTTGATTG
GTGTATAATA CACAGATAAT TCATTTCAGA CTATTGTTAT TTTGAACATC GAGTACTTAG CATCATTGAC TGTTTTAGTT CTCATTCTGG CATGCTTAAG AAGTTGTTTA GATTTCAAGT
AGTGTCATTT AGGGTTATCC TGTTCTGCTT TAGTTGCTCC TTTTCCAAAG GTTACCTCTA ATTTACTTAA TTTCTTTTGT TCTCTTCATT GTAAGTACAT TGTTTTGGAT CCTTTGAATT
AGTTCAAAAA CTTCTAGGTA TATCATTTGT ATGTTTCTTT CTCATTGTCT CTCCAATTAT TGTATAGTAA CTTTTGTCAT ATTCTATCTT TGTGTGTCCT GTAGGGCTGT GATGCATCTA
TCCTGTTAAA TGACATGAAT GGAACTGAAA CAGTAGAGCG CAAAGCAGGT CCAAACCTGA CATTGAAAGG GTTTCAGTTC ATTGATATGA TAAAGGAAGA GGTTGAGAAA GAATGCCCAG
GGGTTGTATC ATGTTCTGAC ATACTTGTTC TGGCAGCTCG ATACGGTGTC CTCCTGGTAA GTCTTGATAT CCATACTTGT CTTCTTTTTC ATTACTTCTG TTTCCCCACT TCCTTTTGAG
GATCATTTTT TTTATCATCC TCGAAACTTC TTCCTCTAGA ATGACTAACC AGCTTGAAGC ATTATTCTCT TTCTGTCCAC AAGTTGATGG ATTTAACATT TTGAATCTAT CATTTAATTG
GAGAGGAAAA TGATTGATCA TGTAAACATC TCCGATGGCC ATCTCTTTTT TCCAAGCATT TCGAAGTTAT TTCTTAAATT ACAACTTGCC GAAAGTCAGT ACCTCGCATG AGAATAACCT
TTTGAATTTG TTTTCTCCTA TATCCAATTT TCACTCTGGT ACCATTTTAT ATCAATCACA TACTAAAATT TTACCTGATG TATTCTTTTT CCTTGTATTC TGTCAAATAC ATGTTGTACT
TCATTTCTTG TGGACGAATT GGATTTCCAT ATGTATTAGA TATACTGCAT TTTTTTCTTA CCGACAGACA TAGATGGCTT ACTGATTCAT GTATCTTTCT GTAGTCTGGT GGTCCATATT
ATCCTCTATT TACGGGCAGA AGAGATGGTA ATGAATCTTT CTTTCACAAA GCCGAAATTG AGATGCCAGG GCCAGATGAA GATATCACAG ATACACTGCG GTTGTTTTCC CTGAGGGGAT
TCAGTGAAAG GGAAACTGTA GCACTTCTTG GTAAAAATTC AGTCCACTTG TTTAACTTTC TGAAGCATAA GCATACTTGA AAGGTAGAAA GTAATTCCTA CTTAATATTG AAATTCTACT
TTAATCTGTT TAAAATGCAG GAGCCCACAA TATTGGTCAA GTTAGTTGTG AATTTATTAA ACCAAGGCTT GGTAACTTCA GGAACACAGG ATTTCCTGAT TCAACCATCA CTACGAATTT
CCTTGCAGAG ATGAGCTTTA AGTGCCAGGA AAGCAGCGCT AGTGTCAGTA ACAGCTATCC TTCTCAAGCA ACATCATTTT CTCCACCTGA ATCTCCCTTT GGCACTCATT ACTATCAAAA
CCTAGTCCAG GGTAGAGGTC TCCTTCATGC TGATCAGCAA TTAACTGCCG ATGATGAGAC AGCGAAAGTT GTAGAGGAAT ATGCTTATGA TGGAAAGGCA TTTAGAAACG ATTTTGCTCG
CATGTTGATT AAACTATCAA ACCTTGGTGT GAGGACTGGT TTGCAGGGAC AAGTACGACT CAATTGCTCT ATTGCTCTCA ATTCAGTTTA ATTCTGTAGA TCCGATATAA ACACAATTAT
TAAGAAAAGC AGCTCCACTC GATTTTATTG TATACTTGAC ATATAATTAG GCCTCCTCTC AGCTCAAGCT TCCAGAATCA TCGTAGCCAG CCAGCCACGT TCTTTCATGG ACAGGTCCGA
ACTCATTATT CTGAAGGCTC TACAAGTAGC AGGCAAATTT TCTGGAAATC TGGTAAGAAG ACAACATGGT AATGTAGCTT GTAACACAGT TGTTTCATTA ACAAGGAGGG TAGT
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCAATGA AAATTCTGGG TCTGTTGTTG TTCTTGGCTA TCGCTGCCAT TTCAGGTCTT GGGGCTGAAG GATCAGACGA TAACATCAGC GATTCTTCGC TTTTCCGATA CGATTTCTAT
GAAAAGACTT GCCCTGACGT TGAGAAAATC ATTTATTACG CCATGCAAAA GATTATCTCC CAGAACAAGA ACGCCCCTGC TCAGCTGCTT CGCCTCCTTT TCCATGATTG CTTCATTGAG
GGCTGTGATG CATCTATCCT GTTAAATGAC ATGAATGGAA CTGAAACAGT AGAGCGCAAA GCAGGTCCAA ACCTGACATT GAAAGGGTTT CAGTTCATTG ATATGATAAA GGAAGAGGTT
GAGAAAGAAT GCCCAGGGGT TGTATCATGT TCTGACATAC TTGTTCTGGC AGCTCGATAC GGTGTCCTCC TGTCTGGTGG TCCATATTAT CCTCTATTTA CGGGCAGAAG AGATGGTAAT
GAATCTTTCT TTCACAAAGC CGAAATTGAG ATGCCAGGGC CAGATGAAGA TATCACAGAT ACACTGCGGT TGTTTTCCCT GAGGGGATTC AGTGAAAGGG AAACTGTAGC ACTTCTTGGA
GCCCACAATA TTGGTCAAGT TAGTTGTGAA TTTATTAAAC CAAGGCTTGG TAACTTCAGG AACACAGGAT TTCCTGATTC AACCATCACT ACGAATTTCC TTGCAGAGAT GAGCTTTAAG
TGCCAGGAAA GCAGCGCTAG TGTCAGTAAC AGCTATCCTT CTCAAGCAAC ATCATTTTCT CCACCTGAAT CTCCCTTTGG CACTCATTAC TATCAAAACC TAGTCCAGGG TAGAGGTCTC
CTTCATGCTG ATCAGCAATT AACTGCCGAT GATGAGACAG CGAAAGTTGT AGAGGAATAT GCTTATGATG GAAAGGCATT TAGAAACGAT TTTGCTCGCA TGTTGATTAA ACTATCAAAC
CTTGGTGTGA GGACTGGTTT GCAGGGACAA GTACGACTCA ATTGCTCTAT TGCTCTCAAT TCAGTTTAA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCAATGA AAATTCTGGG TCTGTTGTTG TTCTTGGCTA TCGCTGCCAT TTCAGGTCTT GGGGCTGAAG GATCAGACGA TAACATCAGC GATTCTTCGC TTTTCCGATA CGATTTCTAT
GAAAAGACTT GCCCTGACGT TGAGAAAATC ATTTATTACG CCATGCAAAA GATTATCTCC CAGAACAAGA ACGCCCCTGC TCAGCTGCTT CGCCTCCTTT TCCATGATTG CTTCATTGAG
GGCTGTGATG CATCTATCCT GTTAAATGAC ATGAATGGAA CTGAAACAGT AGAGCGCAAA GCAGGTCCAA ACCTGACATT GAAAGGGTTT CAGTTCATTG ATATGATAAA GGAAGAGGTT
GAGAAAGAAT GCCCAGGGGT TGTATCATGT TCTGACATAC TTGTTCTGGC AGCTCGATAC GGTGTCCTCC TGTCTGGTGG TCCATATTAT CCTCTATTTA CGGGCAGAAG AGATGGTAAT
GAATCTTTCT TTCACAAAGC CGAAATTGAG ATGCCAGGGC CAGATGAAGA TATCACAGAT ACACTGCGGT TGTTTTCCCT GAGGGGATTC AGTGAAAGGG AAACTGTAGC ACTTCTTGGA
GCCCACAATA TTGGTCAAGT TAGTTGTGAA TTTATTAAAC CAAGGCTTGG TAACTTCAGG AACACAGGAT TTCCTGATTC AACCATCACT ACGAATTTCC TTGCAGAGAT GAGCTTTAAG
TGCCAGGAAA GCAGCGCTAG TGTCAGTAAC AGCTATCCTT CTCAAGCAAC ATCATTTTCT CCACCTGAAT CTCCCTTTGG CACTCATTAC TATCAAAACC TAGTCCAGGG TAGAGGTCTC
CTTCATGCTG ATCAGCAATT AACTGCCGAT GATGAGACAG CGAAAGTTGT AGAGGAATAT GCTTATGATG GAAAGGCATT TAGAAACGAT TTTGCTCGCA TGTTGATTAA ACTATCAAAC
CTTGGTGTGA GGACTGGTTT GCAGGGACAA GTACGACTCA ATTGCTCTAT TGCTCTCAAT TCAGTTTAAT TCTGTAGATC CGATATAAAC ACAATTATTA AGAAAAGCAG CTCCACTCGA
TTTTATTGTA TACTTGACAT ATAATTAGGC CTCCTCTCAG CTCAAGCTTC CAGAATCATC GTAGCCAGCC AGCCACGTTC TTTCATGGAC AGGTCCGAAC TCATTATTCT GAAGGCTCTA
CAAGTAGCAG GCAAATTTTC TGGAAATCTG GTAAGAAGAC AACATGGTAA TGTAGCTTGT AACACAGTTG TTTCATTAAC AAGGAGGGTA GT
|
Retrieve as FASTA
|
|
