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Entry information : EguKat[P]12
Entry ID 11409
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-03-13 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2013-03-13 (Qiang Li)
Peroxidase information: EguKat[P]12
Name EguKat[P]12
Class Catalase     [Orthogroup: Kat001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguKat[P]12
start..stop		 S start..stop
EcamKat[P]06 243 2.2e-81 1..230 1..237
EgrKat[P]04 202 2.72e-63 96..244 240..434
EgrKat[P]04 186 8.24e-57 1..102 2..103
EcamKat[P]11 190 9.56e-63 1..102 1..102
EguKat[P]08 198 1.31e-61 96..244 240..433
EguKat[P]08 142 4.66e-40 32..111 50..124
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 366..671 304 N° 2 1283..1464 180 N° 3 1630..1707 76 N° 4 2226..2289 62
N° 5 2375..2466 90  
join(366..671,1283..1464,1630..1707,2226..2289,2375..2466)


exon

Literature and cross-references EguKat[P]12
Protein sequence: EguKat[P]12
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   242 (252)
PWM (Da):   %s   26191.25 (28134.2)  
PI (pH):   %s   5.98 (7.15) Peptide Signal:   %s   cut: 23 range:23-274
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
QTIIYVIGPILLDDYHLxEKLANFDRERIP*SVVHARGACAKGFFEVTHDISHLTHADFLQAPGVQTPVTVRFSILIHERGGPETLRDPRGSxVNFYTRxVRPDHEDNFDFGPLDGAKTW
PEDILPLMPVGRLVLNRNIDNFFAENEQLALHFxPSIVVPGVYFMHRDEEVRIVLEYFSSDALGSxSCGQTIIEKENNFKQLGERCRSxxxDRExFICR*IDALSNPRVTxMRSATSGFH
TGLR

Retrieve as FASTA  
Remarks Pseudogene from genomic (5' end is missing; stops in frame, PS is missing).
scaffold_6_22058 (366..2466)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CAAACTATCATCTACGTCATAGGTCCAATTCTTCTTGACGATTATCACCTCNTGGAGAAACTTGCCAACTTTGATAGGGAGAGGATTCCATAGAGTGTTGTCCATGCCAGGGGAGCCTGC
GCAAAGGGATTCTTTGAGGTCACTCATGACATTTCTCACCTTACCCATGCCGATTTCCTTCAGGCACCAGGAGTTCAAACACCTGTGACTGTCCGTTTCTCCATCCTCATCCACGAAAGG
GGCGGCCCTGAAACCCTGAGGGACCCCCGGGGTTCTCNTGTGAACTTCTACACNAGANAGGTGAGGGGGTCGTTTTGGTAGTAGACATGAATGTGCAGTATGGACGGGCATGAGTATGAT
GCTCCCTGTGATGAATCCTTTCACGGGTGGCCTAAACTCGACCNATGCATATGGCAGTTCTCTTGTCCACATTGCATACATTTGTTTTGNTGCACTTTGCTATGTGATCTTACCTTTTCT
GTNACTGCAGGGTAACTTTGATCTGGTAGGAAACAATTTCCCTATCTTCTTTATCCGCNATGGGATGAAATTCCCGGATATGGTTCGTGCACTTAGACCAAACCCCAAATCCCGCGTCCA
GGAGAACTGGAGGATCCTTGACTTTTTCTTCCACCATCCCGAGAGCTTGCGCTTGTTCACCTTCCTCTTTGATGATATAGTGCACAAGATTACAGGCACATGCAGGGCTCTGGAGTTAAC
ACCTACACTTTGATCAACAAGGCCAGAAAAGCGCATCATGTGAAGTTTCACTGGAAACCAACTTGCGGGTCAAGAGCTTGCTGGAGGAAGAGGCAATTAGAGTCGGGGGATCCAATCACA
GCCATGCAACTCAGGATTTTNTGATTCCATTGCTGCTGGAAACTATCCTGAATGGAAACTTTTCGTTCAGATTGTCAATCCTGATCATGAAGACAACTTCGACTTTGGCCCACTTGATGG
GGCTAAGACCTGGCCCGAGGACATATTGCCCCTAATGCCAGTTGGCCGCTTGGTCTTGAATAGGAACATTGATAACTTCTTTGCTGAGAATGAACAGCTTGCATTGCATTTTGCNCCTTC
AATTGTAGTTCCCGGCGTCTATACGATTCGGATGATAAGCTGCTCCAAACTCGTCATCTCATATTCTGATACTCGGAGGCACTGTCTTGGACCAAAATATCATCAACTCCCACCCCCCCC
NNNCCCNCCTCCCCCCCCAATACTCGTAAATGCGCTCATCACAACAATCACCCTGAAGGTTTCACGAATTTCATGCATAGGGATGAAGAGGTAAGAATCGTCTTAGAATACTTCAGCAGC
GATGCTCTGGGCAGCANCTCTTGTGGGGATTTTTTGTTGATGTAACTNGACATCGTGCTTTCCTATAAGCATGTAGGCGTTGTNATGCAATCTGACATNTCAANTGCGGATCCTAAAGTG
GCAGTGCGAATGTCCTCCCTCCTTTTGANGAAGATTACTTTCTTAATTTTGCAAATGCACTATGNACCTGAAACATNCATACATGTTTACATATGTAGGAAATGCCTNTCTGCTATTATG
TAAAATGATTATCTGTTGAGCAAATGCTTAATTTCCCTNTTGCANATAAACTATTTTCCATCAAGGTANNATCCCGTTTGTCATGGAGAGAGGTATCCCATTCCACCTGCTATGCTGACT
GGAAAGCATGAAAAGGTGTGTTTTTAGTTAGGATCTCTTTTACGTAAACAGAGATTGATTGTCTTGAGGTGCTTTCATGGCGATGTCCATGGGATAGACTCAGCTTGTCCTAGATGATCA
ATTGAATTGCAGTGAGTAGTGCGACTGATGTATGTGTTTGGATTTTNTTTACTTTTGTTGCTCCAAACAGACCATCATTGAGAAAGAGAACAACTTCAAGCAGCTCGGAGAGAGATGCCG
ATCATANNNNNNNNNGACAGGTATTCTTCAGTTGCGCATTTCCTGANAATAGTTTGATGGTCTCATGTTTCTCAATCGTCTGTCTCTGTTTTCATTTTTCAGGTAAGAGNGGTTCATCTG
CCGATAGATCGATGCTTTATCTAACCCACGTGTGACTCNNATGAGATCCGCAACCTCTGGATTTCATAC

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CAAACTATCATCTACGTCATAGGTCCAATTCTTCTTGACGATTATCACCTCNTGGAGAAACTTGCCAACTTTGATAGGGAGAGGATTCCATAGAGTGTTGTCCATGCCAGGGGAGCCTGC
GCAAAGGGATTCTTTGAGGTCACTCATGACATTTCTCACCTTACCCATGCCGATTTCCTTCAGGCACCAGGAGTTCAAACACCTGTGACTGTCCGTTTCTCCATCCTCATCCACGAAAGG
GGCGGCCCTGAAACCCTGAGGGACCCCCGGGGTTCTCNTGTGAACTTCTACACNAGANAGGTGAGGCCTGATCATGAAGACAACTTCGACTTTGGCCCACTTGATGGGGCTAAGACCTGG
CCCGAGGACATATTGCCCCTAATGCCAGTTGGCCGCTTGGTCTTGAATAGGAACATTGATAACTTCTTTGCTGAGAATGAACAGCTTGCATTGCATTTTGCNCCTTCAATTGTAGTTCCC
GGCGTCTATTTCATGCATAGGGATGAAGAGGTAAGAATCGTCTTAGAATACTTCAGCAGCGATGCTCTGGGCAGCANCTCTTGTGGACAGACCATCATTGAGAAAGAGAACAACTTCAAG
CAGCTCGGAGAGAGATGCCGATCATANNNNTTCAGGTAAGAGNGGTTCATCTGCCGATAGATCGATGCTTTATCTAACCCACGTGTGACTCNNATGAGATCCGCAACCTCTGGATTTCAT
AC

Retrieve as FASTA