Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
339 (317) |
PWM (Da): |
36347.88 (34013.7) |
Transmb domain: |
i7-29o |
PI (pH): |
4.44 (4.43) |
Peptide Signal: |
cut: 23 range:23-339 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MRVAMCLALF LAMLELSAVA LSKSPTTSRE ECADDHNASP LSTTFYEDTC PEAEAIIFSW VDRAVSEDPR MAASLLRLHF HDCFVNGCDA SVLLDDIEGF VGEKTAGPNL NSLRGFEVVD
AIKSELETVC PSTVSCADIL ASAARDSVLV SGGPGWDVLM GRRDSLGASR DAANNNIPAP NSTVEILVAK FQSAGLTLND MVALSGAHTM GKARCPTFRS RLAGSAHSTG PKVNLEFLQS
LQQLCSGPDS NSTLAELDLV TPATFDNQYY VNLVSGEGLL QSDQVLFAGD DRTRQIVESY AEDPLTFFED FKRSMVRMGS LGPLTGKEGE IRRNCRIVN
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (3 introns). Scaffold_8_29768 (6119..7590).
Paternal (g3896.t1): LTLNDMVALSGAHTM |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TGCTCAGTTC GAATAACGGA CGATCAATCC GCACATGTTC AGCTAGGACA GGAAAGAGCG GTTAGTAGTT AAGAAGAGTG GATTTTCCTA AGACTATATG TCAATGTGGT CATGGCCCTG
GACCAGAAGT TGGTATCGGA AAGAAACTGA GACTATTATC TACCATGAAT CGAGCAGCTA ACGAAGCCTC TCGGCTGAAT TTGAATTTGA CAGTGGTCTG CATAACGTCG GGCGTATGTT
ACTTACAAGT AGAGTAAGGG GGGGACGTTC GTAGCCTAGG CAACAAAAGG GTGAAAATTC GATTCAACCA CGGAGTTTAT TATGCAATTT ACTATGGCAC ACAGGCTTCT CATCGTAAGC
CAGCGAAGCG AGAACCGTAA AGGATATAGA AGAAAAATAT GCTACATCAA TCATCGGTAG TTACAAATGA CTGGCTGATC TATCCCTACC GTCGAGTACA AAAACATTCC GGCATTTCTA
CAAGCTGCAA CACTATGCTG GGACCGCCTT CTATTTCGCT GCTCCACTCA GGTACCTGCA GAAGCATGAT GTCCACATTG GTCAGCAACG GGCGCCAAAT CTTGCATCAA GCCTAACAAA
CGCTATCAGA TTATACTAGT GTTTTTTCCT TGTCTGAGGA GCTTTCCGTG GGTACTCTCG ACCTACATCA CCCACCTCGC ATGAGTCTTT ACATCATGTG GATCTCACAT GATCTAATGG
CTCATGGGAA GCGGGCTAAC ATCCCCTCAT CAACGCGGTT GCTTAAGTCC TCCCCAAATA ACTAACACGA AATAATGAGA TCTGGAAGTA TCATCACGCC TCCCAGATTA CAGGTGCATG
CAATTGTTTA TAAATGATTT TCTGAAATTT TCAGGACTAG GAGGCTAGTA GGGCACTAAT CTCCTTTTAG TAAATAGGGC TTAAAACAAA GGGAGGTACT CTTGAAGTTT ACTGTGGCCA
AAAATAATAC TTCAATTGGA GCTTCATTAA TTCTCAATTT ACAACAAAAA TTTGCTCAGC CTTCATGAAC TGCCACAGTT TCCAATTCCA AATAAAGCTG AACAGGATAA AAGATGCCAA
AGAATTATTA TGACAGACAA AGTAGCTCAT TGAGAACTGT AATTTGCAGG TTAATATTAG ACTCATAGAA TCTGCAAAAT CCTTAATTTC CCTGTTTAAT GGTTCTTTCT AGAGTTTCTC
TTGAAGAAAA GTGCGAAATT TGTTTTTCAC TAGTAGGCCT CATTTATAAA TTGCACAAGA AAAATCAAAG GACACACGAC CAAGAAAGGA TATTATGACA ACCTGTTGAC TTATTCTTCA
GCATCCATTG CTGAGCAACC TGAAAACCCT GGCACAAGTT GGCAAAAATA AGAGTTACTC GTGGTAGTTT TTTAGAACAT GCGGATCTGG AAAGCACCAG ATACCTGCTG GAAGTGAGCT
GGATCATTTA CTGAATTAGC TGCCGCTTGA AACTGTGAAT AACCAAGTTC CTAAACAACC AAAATTTGTA ATAAGAAGCA CTGAGCAAAC CCAACTGAAA AGGTGGAACA GGCAACTCCA
AGTGGAAAAT TCTACAACAA TGCTAGGACA GAGACATAAA ATATTGGATG TCTATTTCAT TTAAATTTCT CATTTTTACT GTAAAATTCC TCTTACCTCT CATTTCCTGC TTTATAAAGT
GCATCTGCCA GCTCCTCTCA GAAAATTAAA AGGTACATAT CTTATGTATC TTTTTTATGG CCACAAAATA CCATCTCATC TCAAGCATCT CTATGTGATA AGGTTAATCA ACATGTTGAA
ACTGTCCTCT CTAAAGCTTT GATCAGCATA AAATAATTAT AGTTCAAAAC CTGTGCAATT TTTCACAAAT TTATATCTAT TTTTATGTCT CACAATAACT ACCAATTGCA AAACAAATTA
GGCAAACATA AACATGAAGT GAACAGATTG AATAGTTGAA GCATAAGTAC ACAAAGAAAT GATTGAATTG CCTAATTGTC
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGGGTGG CCATGTGTTT GGCTCTCTTC TTGGCCATGC TTGAGCTGAG TGCCGTTGCC CTTTCGAAAT CACCCACCAC CTCGCGTGAA GAATGTGCAG ACGATCACAA TGCGAGCCCC
TTGAGCACCA CTTTCTATGA GGACACGTGC CCCGAAGCGG AGGCGATCAT CTTTTCTTGG GTCGATAGGG CGGTCTCCGA GGACCCGAGG ATGGCCGCTT CGCTGCTGCG CCTTCATTTT
CATGACTGTT TCGTCAATGC AAGTTTTGAA ATCGATATTG TCGTGGCATT TTCTCTTTCC AAATGTTCAA GTGAATAAGT TCAAGGTTCT CTTTTTTCTG TCAAATTATT TTTGGTGCAG
GGATGCGATG CTTCTGTCCT TTTGGATGAC ATTGAAGGTT TCGTGGGAGA GAAGACGGCC GGACCAAACT TGAATTCCTT GAGGGGGTTC GAAGTGGTCG ACGCTATAAA ATCTGAGCTT
GAAACTGTTT GTCCTAGTAC AGTTTCATGT GCCGATATCC TTGCAAGCGC TGCCAGAGAC TCTGTTTTAG TGGTACGTTC TCAATCCGAA TGGCACACTT AGGTACTCCG TAACTTATAA
AATTTCTGAA CTTGGAAGAG GGTTGTTAAG ATATTACAGT CTAAGCTGAT TCTTAGAATG AATCGCAGTC GGGCGGGCCT GGATGGGATG TTCTGATGGG TCGGAGAGAC AGCTTAGGCG
CGAGCAGAGA CGCAGCGAAC AACAACATTC CGGCGCCAAA TTCTACCGTG GAGATATTGG TTGCTAAGTT TCAGAGTGCT GGTCTCACCC TCAACGACAT GGTCGCCCTA TCTGGTATCT
TCTCCTGTTT ATTATCCGAT TCCCTAGTTT TGCACATCAT GCCCTTCAAG CGCTTGAAAA TTCACCTAGT GCAATGCCAT TTTTAGAGGA AATAATTAGA CTCGACGATG TAGAAACGTA
GCGTCAACAT GTTTTTTCCA GGTTACCATT AGGCGTACGT CGCAGCAACC TGGTATTTAA TGTTTAGGAA CTTGGGTGAT GAGACCAAGT CTGCACATGC TAACAATACT GGAATTAGAA
AGGATCGTTT GCTACTTTCA CGCAGGTGCG CACACTATGG GAAAGGCTAG GTGCCCGACA TTTAGATCAC GGCTCGCGGG CAGTGCCCAC TCGACCGGTC CAAAGGTCAA CCTGGAGTTC
CTTCAGTCAC TGCAGCAGCT TTGCTCGGGT CCCGATAGCA ATTCGACTCT AGCAGAGCTC GACCTGGTGA CGCCGGCGAC TTTCGACAAC CAGTACTATG TGAACCTTGT CTCAGGAGAG
GGGCTGCTTC AGTCCGACCA GGTTCTCTTT GCCGGAGACG ACAGAACGAG GCAAATAGTG GAGTCCTATG CAGAGGACCC CCTGACGTTC TTTGAGGATT TCAAGCGCTC GATGGTGAGA
ATGGGGAGCC TGGGGCCGCT CACGGGTAAA GAGGGCGAAA TCAGAAGAAA TTGTAGAATC GTCAACTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGGGTGG CCATGTGTTT GGCTCTCTTC TTGGCCATGC TTGAGCTGAG TGCCGTTGCC CTTTCGAAAT CACCCACCAC CTCGCGTGAA GAATGTGCAG ACGATCACAA TGCGAGCCCC
TTGAGCACCA CTTTCTATGA GGACACGTGC CCCGAAGCGG AGGCGATCAT CTTTTCTTGG GTCGATAGGG CGGTCTCCGA GGACCCGAGG ATGGCCGCTT CGCTGCTGCG CCTTCATTTT
CATGACTGTT TCGTCAATGG ATGCGATGCT TCTGTCCTTT TGGATGACAT TGAAGGTTTC GTGGGAGAGA AGACGGCCGG ACCAAACTTG AATTCCTTGA GGGGGTTCGA AGTGGTCGAC
GCTATAAAAT CTGAGCTTGA AACTGTTTGT CCTAGTACAG TTTCATGTGC CGATATCCTT GCAAGCGCTG CCAGAGACTC TGTTTTAGTG TCGGGCGGGC CTGGATGGGA TGTTCTGATG
GGTCGGAGAG ACAGCTTAGG CGCGAGCAGA GACGCAGCGA ACAACAACAT TCCGGCGCCA AATTCTACCG TGGAGATATT GGTTGCTAAG TTTCAGAGTG CTGGTCTCAC CCTCAACGAC
ATGGTCGCCC TATCTGGTGC GCACACTATG GGAAAGGCTA GGTGCCCGAC ATTTAGATCA CGGCTCGCGG GCAGTGCCCA CTCGACCGGT CCAAAGGTCA ACCTGGAGTT CCTTCAGTCA
CTGCAGCAGC TTTGCTCGGG TCCCGATAGC AATTCGACTC TAGCAGAGCT CGACCTGGTG ACGCCGGCGA CTTTCGACAA CCAGTACTAT GTGAACCTTG TCTCAGGAGA GGGGCTGCTT
CAGTCCGACC AGGTTCTCTT TGCCGGAGAC GACAGAACGA GGCAAATAGT GGAGTCCTAT GCAGAGGACC CCCTGACGTT CTTTGAGGAT TTCAAGCGCT CGATGGTGAG AATGGGGAGC
CTGGGGCCGC TCACGGGTAA AGAGGGCGAA ATCAGAAGAA ATTGTAGAAT CGTCAACTGA
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Retrieve as FASTA
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