Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
323 (299) |
| PWM (Da): |
33863.77 (31539.5) |
Transmb domain: |
i7-29o (i7-29o) |
| PI (pH): |
9.16 (9.12) |
Peptide Signal: |
cut: 25 range:25-323 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSTGSRLALA LALVLSTIAP PCSAALRAGF YKGKCGLVDV ESVVATIVAS RFSKDPSIVA ALLRLQFHDC FVNGCDASIL LDGSSSEKTA GPNLSVRGYD LIDAAKAAVE AICPGVVSCA
DIIVMATRDA VALAKGGRYS VQTGRLDGKI SLAQNVNLPG PSMTVSQAAL AFARKGFTIS DMVILLGGHT VGITHCSLFQ DRLYNFNGLG KPDPTMDPKL VAALRPRCPQ TATIDNTVNL
DQNSSSALVV DNSFYKQIVA RRGILQIDQE LAVDRLSKSL VATLANATNF SARFGLAMVK LGGLQSRLPG EIRSSCRAIN KRS
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic. Scaffold_10_33502 (3076..4365)
Paternal (g29649.t1): splicing error intron 3, TIAPPCSAALR, QFHDCFVNGCDASILLD, PGPSMTVSQAAL, TMDPKLVAALRP, LVVDNSFYKQI |
Promoter►
Send to BLAST
Send to cis Analysis
|
|
Terminator +►
Send to BLAST
Send to cis Analysis
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGTAGTGTTT GCTCCTGCTG ATCATCCCGT TTATTTGTAT TCTTAAATTT GACGGCATTA GTTGCACGCG GGTGCACGGA TCTTGATTGA TTCGACGTTA GAAGCGTCAT GTCCGCGATT
CCAGTTGATT GACGATGTTT GTTTTTTTTT TTTGATGTGC AATAAAAATT TTCTGGTCTA TGCATAGGCG TTGACCGGTT TGAGGATAAT ATTTGTAATC ATAGATATTC GTACTATATT
ATCGATTATG GTTGTATAAA CACAAGAACT TGTTGGCGGT CGAGCATACC AATTATATTT AGCCAGTGAA TTCGTGCCGT TTCACATGCA CTCTTTCTCC TTCTCTTCTG ACGCCTCAGC
CTCTGGCCGT CGGCCGGCCT CATCATCACC ATCAGCTCGA GCCATTAGGT CATCGCCGAA GCTCTCTCTC TCTCTCACTA TTTTTGTTTT CAATGTACCC ACCATCGAAT ATCGATATTA
GAAATTAATA TCTTTCTATC GGCCTTTTTT TTTCTTTGGG TGGGTGGGGG GTGGGGGGGT GGGTTCAATT TCAAGGCTAA TATTAAAAGT TTGGTTTCCC ATTAGACGAT TCAACTATAA
TTTTTCAAAG GCAATATGCC CAAGAATTTT GTCACATCTT GGACCGGACC CATTTTAATT ATGTTCGTTA TGTGTTTTGT ATTCAATTGA TCAAAATTTG GAGCAATTTT TTTTATGGAT
GAATTACAAA TGTTGTTCTA TAATCATGTT TTATGTTACT TGTTTTGAGC TATTTATTAT TTATTTTATG GGATAAATGC AATAGAAGTC CTAAAACTTG TTAGAAAAGC CTAATTGAAT
CATAAAACTT ACAAAAAATG CAATCAAGTC TTAAAACTTG TCAAATTGGT TCAATTGAGT TCTAAAATTA AACTGTCAAA TTTATTAACG GAAAATGCTA ACTTGGCACT AACATAGCAT
TTTAAATGAT TTTTTATTTT TATTTTCCAC GTGACTTTTG AAAATTATTT TTATTCAATT TTCTAAAAAA ATAAATTAAA AACTAAAGAA GAAAAACTAA AATTTATATT TAAAAAAACT
ACTTAAAAAA AGAAGAAGAG AAAATGGCAA TAGTGGCACT TTCGCCGTTG CCACCATCCA TGGCCAGAGG GGTTGGTGAC GGTTGCCGGC CTTAAGTAGA GGTGGTCAGC CCCCACCTAG
CCAGGGCAAG GCCTTGTCGA CCCCAAGCAT AGGCATGCCA CCCTCGGGCT TAGGCGCCCA AACTGGGCAT GTCAGCCCTC ATGGAGGGCC GGCAATAGTC GCTTGCCCTG GGTGAGGCCT
TGCTGGCCCT CCCTGGGGCC CAATGACCGT CTCACTTTGG GTAAAGGGGG TCGCCCAAAT CTAGGTGAGC CTTGCCGGCC CTCTCGAGGG CCTAGCAATC GTCTCCTGCC TTAGGCGAGG
CCGGCCCTCC CTCAGGGCTG GTAACCTTCG CCCATGGCCG GCGAAAGGTC ACTGGCCCCT CTGGCAATGG GCGGCCGAGG TGGTGGAAGC GTCCACGGCT GCCATTTTTT GTATTTTTTT
TTAATAGTTT TTAAAATAAA TTTTAGCTTT TTTTTGTTAG TTTTTAAATG TAATTTTGAA TAAAAAATAA TTTTAAAAAG TCACGTGGAA AATAAAAAAT CATTTAAAAT GCCATATTAG
CGCCAAGTTA GCATTTTTCT TTAGTAAATT TGAAGGTGTT AACTTTAAGA CTCAATTGAA CCAATTTGAT AAATTTTAGT ATTTGATTGC ATTTTTTTCA AATTTTATGA TTCAATTGCA
CTTTTTTTAA CAAGTTTTAG TACTTTGATT GCACTTATCC CTTATTTTAT TCAACATGTT TGTCTATGGA TTGATGTTTT CTGCAAGTAT AGATTTCTAT TGTTATTTCA GCTTTCATTT
TGCTTGCCTA AGGAGTGGGT TGCAAAATTC CTTATTGCTT TAGATTTTTG CTTGGCTTTT ACCTCTGTTT TATTTCTCGT
|
Retrieve as FASTA
|
|
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCGACGG GAAGTAGATT GGCGTTGGCC CTCGCTCTCG TCCTCTCGAC CATCGCGCCC CCATGCTCCG CCGCTCTCCG GGCAGGGTTC TACAAAGGCA AGTGTGGCCT TGTGGATGTC
GAGTCCGTGG TCGCGACCAT CGTGGCCTCC CGGTTCTCCA AGGACCCGTC CATTGTGGCC GCGCTGCTCC GCTTGCAGTT CCACGATTGC TTCGTCAATG TATGTAAATC TTTGCATAAT
TCGATCCTCT ACTTCCAGAG CACGTACTTC CGATGTACTC TAAAGCCGTC GTGATGACCG ATCGATGCTA ATGTCGCGTC CTTTGCGTCC TTTTTTCCCC TTGAAGGGCT GTGACGCGTC
GATCCTGCTA GACGGGAGCT CGAGCGAGAA AACGGCGGGG CCGAATTTGA GCGTGAGGGG CTACGATCTT ATCGACGCAG CCAAGGCTGC GGTCGAGGCC ATCTGCCCCG GAGTCGTTTC
TTGCGCCGAC ATCATCGTCA TGGCAACTCG GGACGCTGTC GCTTTGGTAA TGGAAAGAAA AATTACTTCA AACCCCATCG TACCCGATTC GAATTCGGTC GTGTCATGTT CGGATTAGCC
CTAATGCTAT CTCGAAAATT CATTTTCGTT CAATTTCAGG CCAAAGGAGG AAGGTACAGT GTGCAAACGG GGAGGCTGGA TGGCAAGATA TCGCTGGCCC AAAATGTGAA TCTCCCAGGT
CCTTCCATGA CAGTTTCTCA GGCTGCTTTG GCCTTTGCTC GAAAGGGATT CACCATCTCC GACATGGTCA TTCTTCTAGG TACCGACGGT GTATGCTATA ATTATACTAA TCGCTTTTGG
TAGACGGCTT CGGACTTAAC TTATATACGC ATCATCCGGA CTTCGTCAAG TGGCCACACT GTCGGGATTA CGCACTGCTC CCTCTTCCAA GACCGGCTCT ACAACTTCAA CGGATTGGGG
AAGCCCGACC CGACCATGGA TCCTAAGCTC GTGGCTGCCC TCCGGCCGAG GTGCCCGCAG ACCGCGACCA TCGATAACAC CGTGAACCTG GACCAGAATT CTTCGAGCGC GCTCGTCGTC
GACAATTCCT TCTACAAGCA AATAGTCGCC CGGAGAGGGA TTCTGCAGAT CGACCAAGAG CTAGCAGTCG ATAGGCTGAG CAAGTCCCTG GTGGCGACGC TGGCCAATGC CACCAACTTC
TCCGCTCGGT TCGGCCTCGC CATGGTCAAG CTGGGTGGTC TCCAGAGCCG CTTGCCCGGC GAAATTAGGA GTTCTTGCCG AGCCATAAAC AAAAGGAGTT GA
|
Retrieve as FASTA
|
|
