Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
322 (301) |
PWM (Da): |
34983.68 (32744.4) |
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PI (pH): |
8.64 (8.39) |
Peptide Signal: |
cut: 22 range:22-322 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKKLLVGIAL VLVSLSRCVE SQLQVGFYKD SCRLAEFIVK DEVRKAFIKD KGLAAGLVRM HFHDCFVRGC EGSVLIDSTL SNTAEKDSPA NNPSLRGFEV IDSAKARLET MCKGVVSCAD
ILAFAARDSV EITGGFGYNV PAGRRDGRVS LAPETINLPL PSFNVNQLTQ LFANKGFTQE EMVTLSGAHT IGRSHCTSFN NRLYSFNTTV NQDPSLDPTY ASMLKQRCPQ NNDSTLVVPM
DPPSPNMMDT SYYQGILANR GLFTSDQTLL TNSATANQVT QNARNPFIWK KIFAAAMVKM GKIGVLTGSA GEIRANCRVI NS
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (3 introns).
scaffold_1_1487 (24821..26793).
paternal (g20671.t1): Incorrect prediction (last exon is missing due to splicing error), MKKLLVG, DPPSPNMMDTSYY, MVKMGKIGVLTGSAGEI |
Promoter►
Send to BLAST
Send to cis Analysis
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGAAGC TTCTTGTAGG TATCGCTTTG GTCCTGGTCT CACTGTCTCG ATGCGTCGAG TCTCAGCTTC AAGTTGGGTT CTATAAGGAC TCGTGCAGGT TGGCCGAGTT CATCGTTAAG
GATGAGGTCA GAAAAGCTTT CATCAAGGAC AAGGGTTTGG CTGCTGGCCT TGTGAGGATG CACTTTCATG ACTGCTTTGT TAGGGTGAGT GAAAACCAAT GACACTATCC CATCTTTTGT
TGTAGCTCTA ATTGCAATTA ATGTTTTCAC CAAGGTCAAC TAAAAGCGTC GACTAATTTT CTTTCCTTTT TCCTTTGGTT GTATTTTTGT ATGCAGAATA ATGTGTCAAC TAAGAGTTCA
TTAATTCATT TCAATTTACG CCACTCACAT GCCATACCCA CGTGCCGGTC TCATATGTAG AACATGAATT GACTACTACA AGCTTTTATG TCAATGAAGT ATCTTTCGAT TAATTTAACG
GAACTGTCAT GACCTAATTA ATAGATATGA TACGTCTACT AATTATATTG CACATTCAAA TTGGAATATG ATACATACAT TTATTAAAAG TTAATTGCTT AACTAGATGT GCCTAAATGC
ATTTAACAAG TTTAGATATT TCCGTTGTGT CTGATGTGTT CATTATTCAT CTACCGCAGC TGTCGCATTA ATCATGCGCC ATGCTGTAAA TCTTGTTTAA ATATGCTCCT AAACTCAATG
ACCCTCACAG AAGTACCTTA GCTCTGTTTC GGGAATGGAT TTCATTTGTG AGTTTTAAGA AACATCGCGT GCTTTGATCC ATCTTAGGGT TGTGAAGGTT CCGTGCTCAT CGACTCCACT
CTGTCAAACA CAGCCGAAAA GGATTCTCCA GCCAACAATC CTAGTCTGAG AGGATTCGAA GTAATTGACA GTGCCAAGGC TAGGCTCGAA ACTATGTGCA AAGGAGTTGT TTCCTGTGCT
GACATACTAG CCTTTGCAGC TAGAGATAGT GTGGAGATCG TAATCCCGCA AACCCCTTAA CTCTTATATT TACCAACCTG AGCATAAGTT CATCATACTA ATAAACATGA GACGTTCTGT
TTTCTTTTTG TAGACGGGAG GCTTTGGGTA CAATGTTCCT GCAGGAAGAA GAGATGGTAG AGTCTCTTTA GCTCCAGAGA CTATAAACTT ACCTCTCCCG TCTTTCAATG TCAATCAACT
CACACAATTG TTTGCCAACA AGGGTTTCAC TCAAGAAGAA ATGGTCACAC TCTCCGGTAA CTCTTCACTT AGAGCAGCAA TCTATGAAAT GTGGCTATTT AAGTCCAGAT AAAAAATAGA
ACATCAAGAT TATGTAGGAA AGAGTAACAT TAGAGGAAAA AAATGCTCAC AGGGACGAAT ATAAAGGAAA AAATCATACA TGATACTATT CTCTTTTTGA AAGTGAGGTC CTAGATTTCT
GTAATACTTG GCCCATTATG TGTTGTAGGC AACTTACATT CTTGACTCCT CCCCAATTTC ATAATCAGAA AAAGGAATAT TTACATTAAA AAAAAAAAAA ACTCGCTTCA TGCGTGTCAC
AGGAGCGCAT ACGATCGGTC GGTCTCACTG CACTTCCTTC AACAATAGAC TGTACAGCTT CAATACAACT GTGAACCAGG ACCCAAGCTT GGACCCTACA TATGCATCCA TGTTGAAGCA
ACGGTGTCCA CAAAACAATG ATTCGACCCT AGTTGTTCCA ATGGACCCCC CTAGCCCGAA CATGATGGAT ACAAGCTATT ACCAGGGCAT ACTTGCGAAT CGAGGCTTGT TCACATCAGA
CCAGACACTC CTCACAAACT CCGCAACTGC AAACCAAGTT ACTCAAAATG CAAGAAATCC ATTCATTTGG AAGAAAATTT TTGCCGCTGC AATGGTGAAG ATGGGTAAAA TCGGTGTCTT
GACAGGAAGT GCCGGGGAGA TTCGAGCGAA TTGCAGGGTC ATCAATAGCT AA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGAAGC TTCTTGTAGG TATCGCTTTG GTCCTGGTCT CACTGTCTCG ATGCGTCGAG TCTCAGCTTC AAGTTGGGTT CTATAAGGAC TCGTGCAGGT TGGCCGAGTT CATCGTTAAG
GATGAGGTCA GAAAAGCTTT CATCAAGGAC AAGGGTTTGG CTGCTGGCCT TGTGAGGATG CACTTTCATG ACTGCTTTGT TAGGGGTTGT GAAGGTTCCG TGCTCATCGA CTCCACTCTG
TCAAACACAG CCGAAAAGGA TTCTCCAGCC AACAATCCTA GTCTGAGAGG ATTCGAAGTA ATTGACAGTG CCAAGGCTAG GCTCGAAACT ATGTGCAAAG GAGTTGTTTC CTGTGCTGAC
ATACTAGCCT TTGCAGCTAG AGATAGTGTG GAGATCACGG GAGGCTTTGG GTACAATGTT CCTGCAGGAA GAAGAGATGG TAGAGTCTCT TTAGCTCCAG AGACTATAAA CTTACCTCTC
CCGTCTTTCA ATGTCAATCA ACTCACACAA TTGTTTGCCA ACAAGGGTTT CACTCAAGAA GAAATGGTCA CACTCTCCGG AGCGCATACG ATCGGTCGGT CTCACTGCAC TTCCTTCAAC
AATAGACTGT ACAGCTTCAA TACAACTGTG AACCAGGACC CAAGCTTGGA CCCTACATAT GCATCCATGT TGAAGCAACG GTGTCCACAA AACAATGATT CGACCCTAGT TGTTCCAATG
GACCCCCCTA GCCCGAACAT GATGGATACA AGCTATTACC AGGGCATACT TGCGAATCGA GGCTTGTTCA CATCAGACCA GACACTCCTC ACAAACTCCG CAACTGCAAA CCAAGTTACT
CAAAATGCAA GAAATCCATT CATTTGGAAG AAAATTTTTG CCGCTGCAAT GGTGAAGATG GGTAAAATCG GTGTCTTGAC AGGAAGTGCC GGGGAGATTC GAGCGAATTG CAGGGTCATC
AATAGCTAA
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Retrieve as FASTA
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