Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
318 (301) |
| PWM (Da): |
33768.05 (31933.9) |
Transmb domain: |
i7-26o (i7-26o) |
| PI (pH): |
6.88 (6.50) |
Peptide Signal: |
cut: 18 range:18-318 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKNVVLVLLF VLPLALADLR VGFYNSTCPQ AESIVRQVIQ KRFRADQSIT AALLRMHFHD CFVRGCEASI LIDSTATKPS EKTAGPNFSV RGYDIIDEAK KSLEAACPST VSCADIITLA
TRDSVFLAGG PSYNVPTGRR DGLVSNPDEV DLPAPSLSVS EALQAFTAKG FTLTEMVTLL GGHSVGVAHC GLFEDRLSNF QGTGAPDPTM DSSLVAKLKG ICGNxTSNDP TAFLDQSTSF
IMDNQFYKQI MQKKGVLQID QELAVDKSSA GIVSRFASDA NSFKKSFASA MVKMGNVQVL TGNAGEIRRN CxAFNQPK
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Retrieve as FASTA
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| Remarks |
Partial sequence from genomic (start codon is missing). Scaffold_1_2076 (7148..8493).
Partenal (g21439.t1): TMDSSLVAKLKGICGNS, LTGNAGEIRRNCG |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TGATACGTTG CTATAGGGGA ATAATTTCTT CACTTGATTG AAAATACCAA TTCCATAATC CGATTCGGGA ATGGATTTCT GTATGCTAGC TTCTTTATTT ACTTAAGATG GGTATTTCTG
TAGGGGAATG CATTGACTTT GAATTCACTG TGGATCAAGT ATTAATTTTG AAGAAAGAGC TTATATTGAA GTCTTTATTT TCCAGGGACT GTGCTTAAAG ATTTGGGTCA GCGAATTATA
GGTCAATTAA TGAGTCTGGA CGGGGTGGCA TGAATTCCTG CAAGATCACC TAATCTAATT TAGACCGATT TCATTCTTGC TTGACAAATA TGGAGAAGGC GAGACAGCTG AGGAAATTGG
GAAAGCCATT CGTGCAATAT TATGCACTCA ATCGCGTCAG TTTTGTTTTC AATGCATGTT CCAAAAATTG TTATAACAAG AATACTTGAC ATAAGTCAAT ACTTAAAAAA AAAAAAAAAA
ATTGCCATTT TGATTTTGGT TACATCTCTC TCAATAATTG ACGATTGTTG ACATGTCCAG TAGCTTCTTC ATCAATCTAA GAGCTAGATT TTCCATTTAT TTTCCCATTT TTTAGTGATA
TTTTTACCGG ATTTTGCTAG TGTAACAAAT CTTACGTAAT GTGAAAATAA TAATTTATTG TGAACTACAA TTTCTTGAAG AAGTGAATCA TCCAACAATT TATAATTATT TATGAATTTA
TTTTTGTGGT TTAAAATAGA CTGTTATTCT TATAATATAT TAAAGACTGT TATGCAATCA TTTTTTATTT TTACCAGATA GATTATTTTT GTAAATACCA AGCCCCCTTC AAAGAAAGCC
GTATGGTTGC CGAGCCTGAT CTAAGAAATT GCCCCTCGAC CCATTTCAAG GTGTTTAGGC CCAACCCGTT CTCCGAGCAC ACACTTGCAA AATTCATAAT TCGTGAAGCA ACATTTATAT
TGGATTTTCC ATTTATTTTT TATTTATTGT TTTAATTGCT TTCTTGCAAA AAAAAAAAAA AAAAAAAATT CAAATGCAAC TTGTTAGAGT GAAAATGCGA TAGAAACAAA TAAGAATTAT
CGCTAAAAAT CGATTCTAAT TTGTTGCGTG CTTTAGCTGT AAATCAAGAG TCTTCAACTT TAATGGGCAT GATCTCACAC AAATCTTGCA AAACACCGGC TTCATGCGAT CCAGCTTGAT
CATATTCAAC AAATATGATT AAATAACTTC CATCACCACA AACAACAGCA CCCAAAGAGA ATGATTTTCT TGTTTCCTAA TGAAAAAAAT GGTGAACCAT CTCTCTGGAT AATAGCTTAG
GGACGCGCAT GCTTATTATA ATATAAATTC GGTGAAAATG CATAAACCTT CCAACATATG TTTCATAATC CATGTGCTAA GATCGTCACC TTTGATTTCG CCGGCTCCCT CGTTTTCTTT
CCCTTTCAAC CAGCCCACGC CTTAACTTAT TCTCTTAAAC ACCCTATAAA TATGCATGAT CTAGACTCAT TAAACAAGTG TTCGGATTGG GTCAAAAATA GTCGACTAGA ATAGACCCGC
TTCACCTACT TTGACCCATT TTTATACAAT GCAAATGTAT TGGCCAATAC CGACCTAACC CATATTACAA AAACATTTCC ATATTTAACA CAATTTATGA AAACTCATAC TCAAACCGAG
GTAATTGTGT GGAGTAAGTG AACACGAGAT TGAGTAAGAG CAAAGAGAAT AAAGAGAGCC ATAGAAATAG GTTGGGTCTA AATACGTTGT AAACCCATTT GTGACCCTTT GAACACAGAT
ATTATGTATA AATACATTTA TCACCCATTT ACTAAATATA ACTAACTTAT ATAAAAATTC AGCCCATCAT ATATGGGTTA AGAAATGAAC TTATGATCAA TTTTGATAGG TTTATTAGTT
AACACAGCTG TTGAGACACC AAATAGCTAG TATTGGTCTA TAACCTTATC GAGTTGCATC AATTCAAACT TGTTAAAACC
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Retrieve as FASTA
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DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGAACG TAGTACTAGT GCTTCTCTTC GTTCTTCCCC TCGCGTTGGC TGATTTGAGG GTTGGCTTCT ACAATTCCAC CTGCCCGCAA GCAGAATCCA TCGTGAGGCA AGTCATTCAG
AAGAGATTCA GAGCCGATCA ATCAATCACT GCCGCCTTGC TTCGCATGCA TTTTCACGAT TGTTTCGTGA GGGTAAGTTA CCGGCGGCGT CTTCTGCCGA CTGAACATGT AACTTTGATA
TGTTATAGAT TAAGGAAAAT GACAATGTTA ACTAAGTAGC TAGTTTATAT ATCAATATGT TAAAGCTATG TGACATGCTT TATTGTTACC ATTCATCCAG AGTCTAGTAG CTAACGCAGC
AATTGATATA TCAATTCCAT AATAACTAGC ATTAGTCTTA ATCATATTGA GTCGCATCAA CTCAAACCTG TTAAAGCTCA ACAAACATTA TGTGAAAATT ACTAGACGTT TAAGAAGAAT
GATGTTGTGC TCGATTGATG GTGTCAGATA GGTCTGTCAC CTCCATTTAA CCATAAAAGC ATGCCGCTCA CATTTTTTTT GCCTCGTTTT CTTTATAGGG CTGTGAGGCA TCCATCCTCA
TCGACTCCAC CGCCACGAAG CCATCGGAGA AAACCGCTGG GCCGAACTTC TCTGTGCGAG GATATGACAT CATTGATGAA GCCAAGAAGA GCCTTGAAGC CGCATGCCCT TCGACCGTCT
CTTGCGCTGA CATCATCACG CTGGCAACAC GAGACTCCGT GTTCCTCGCC GGAGGGCCCA GCTACAATGT CCCTACCGGA AGGCGGGACG GTCTGGTTTC AAACCCGGAT GAAGTGGACT
TGCCGGCACC CTCATTATCG GTATCTGAGG CGCTACAAGC TTTCACGGCT AAAGGGTTTA CACTCACTGA AATGGTGACT CTTCTGGGCG GCCACTCCGT CGGAGTCGCT CACTGTGGCT
TGTTCGAAGA CCGCCTTTCG AATTTCCAAG GCACTGGAGC TCCAGATCCA ACGATGGACT CGAGCTTGGT CGCGAAGCTA AAGGGCATCT GCGGGAACTC GACAAGCAAC GACCCCACCG
CGTTTTTGGA CCAAAGCACG TCGTTCATTA TGGATAACCA GTTCTACAAA CAAATTATGC AGAAGAAAGG GGTGTTACAA ATCGACCAGG AGCTCGCCGT GGACAAATCT AGCGCCGGCA
TTGTTTCTAG GTTCGCGTCA GACGCGAACA GTTTCAAGAA GAGCTTCGCT AGTGCGATGG TGAAGATGGG AAATGTCCAG GTTCTCACTG GGAATGCCGG AGAGATAAGG AGGAATTGCG
GGGCCTTCAA TCAGCCCAAG TAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGAACG TAGTACTAGT GCTTCTCTTC GTTCTTCCCC TCGCGTTGGC TGATTTGAGG GTTGGCTTCT ACAATTCCAC CTGCCCGCAA GCAGAATCCA TCGTGAGGCA AGTCATTCAG
AAGAGATTCA GAGCCGATCA ATCAATCACT GCCGCCTTGC TTCGCATGCA TTTTCACGAT TGTTTCGTGA GGGGCTGTGA GGCATCCATC CTCATCGACT CCACCGCCAC GAAGCCATCG
GAGAAAACCG CTGGGCCGAA CTTCTCTGTG CGAGGATATG ACATCATTGA TGAAGCCAAG AAGAGCCTTG AAGCCGCATG CCCTTCGACC GTCTCTTGCG CTGACATCAT CACGCTGGCA
ACACGAGACT CCGTGTTCCT CGCCGGAGGG CCCAGCTACA ATGTCCCTAC CGGAAGGCGG GACGGTCTGG TTTCAAACCC GGATGAAGTG GACTTGCCGG CACCCTCATT ATCGGTATCT
GAGGCGCTAC AAGCTTTCAC GGCTAAAGGG TTTACACTCA CTGAAATGGT GACTCTTCTG GGCGGCCACT CCGTCGGAGT CGCTCACTGT GGCTTGTTCG AAGACCGCCT TTCGAATTTC
CAAGGCACTG GAGCTCCAGA TCCAACGATG GACTCGAGCT TGGTCGCGAA GCTAAAGGGC ATCTGCGGGA ACTCGACAAG CAACGACCCC ACCGCGTTTT TGGACCAAAG CACGTCGTTC
ATTATGGATA ACCAGTTCTA CAAACAAATT ATGCAGAAGA AAGGGGTGTT ACAAATCGAC CAGGAGCTCG CCGTGGACAA ATCTAGCGCC GGCATTGTTT CTAGGTTCGC GTCAGACGCG
AACAGTTTCA AGAAGAGCTT CGCTAGTGCG ATGGTGAAGA TGGGAAATGT CCAGGTTCTC ACTGGGAATG CCGGAGAGAT AAGGAGGAAT TGCGGGGCCT TCAATCAGCC CAAGTAA
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Retrieve as FASTA
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